MGE detailed information
MGE type: Genomic_island MGE length: 12130 bp
Accession: NZ_CP058780 Location: 561444..573573 Organism: Shigella flexneri strain STLIN_17 Replicon: chromosome
Accession: NZ_CP058780 Location: 561444..573573 Organism: Shigella flexneri strain STLIN_17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT03_RS02720 (557521) | 557521..558381 | + | 861 | WP_000809256.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| HZT03_RS02725 (558424) | 558424..559515 | - | 1092 | WP_094337107.1 | fimbrial protein | - |
| HZT03_RS02730 (559526) | 559526..561067 | - | 1542 | Protein_535 | fimbrial biogenesis outer membrane usher protein | - |
| HZT03_RS02735 (561124) | 561124..561821 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| HZT03_RS02740 (561829) | 561829..561949 | + | 121 | Protein_537 | DeoR family transcriptional regulator | - |
| HZT03_RS02745 (562004) | 562004..562468 | - | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HZT03_RS02750 (562468) | 562468..562803 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HZT03_RS02755 (562952) | 562952..564523 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| HZT03_RS02760 (564898) | 564898..566232 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HZT03_RS02765 (566248) | 566248..567018 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HZT03_RS02770 (567048) | 567048..567938 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HZT03_RS02775 (568035) | 568035..569180 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| HZT03_RS02785 (570097) | 570097..571285 | - | 1189 | Protein_545 | YhaC family protein | - |
| HZT03_RS02790 (571307) | 571307..571846 | - | 540 | WP_000675733.1 | protein YhaB | - |
| HZT03_RS02795 (572102) | 572102..572320 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HZT03_RS02800 (572635) | 572635..573573 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HZT03_RS02805 (573672) | 573672..574661 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HZT03_RS02810 (574683) | 574683..576014 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HZT03_RS02815 (576040) | 576040..577248 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|