MGE detailed information
MGE type: Prophage MGE length: 22198 bp
Accession: NZ_CP058780 Location: 3647211..3669408 Organism: Shigella flexneri strain STLIN_17 Replicon: chromosome
Accession: NZ_CP058780 Location: 3647211..3669408 Organism: Shigella flexneri strain STLIN_17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT03_RS17750 (3642611) | 3642611..3643189 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| HZT03_RS17755 (3643429) | 3643429..3645873 | + | 2445 | WP_000973083.1 | acyl-CoA dehydrogenase FadE | - |
| HZT03_RS17760 (3645916) | 3645916..3646362 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HZT03_RS17765 (3646543) | 3646543..3647313 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| HZT03_RS17770 (3647370) | 3647370..3647738 | - | 369 | Protein_3492 | ISAs1 family transposase ISEc1 | Transposase |
| HZT03_RS17775 (3647784) | 3647784..3648473 | - | 690 | Protein_3493 | ISAs1 family transposase ISEc1 | Transposase |
| HZT03_RS17780 (3648544) | 3648544..3649524 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| HZT03_RS17785 (3649671) | 3649671..3650192 | - | 522 | Protein_3495 | HNH endonuclease | - |
| HZT03_RS17790 (3650518) | 3650518..3650750 | + | 233 | Protein_3496 | hypothetical protein | - |
| HZT03_RS17795 (3650747) | 3650747..3651427 | - | 681 | Protein_3497 | Recombination-promoting nuclease RpnA | VF |
| HZT03_RS17800 (3651673) | 3651673..3652548 | + | 876 | WP_000165427.1 | GTPase family protein | - |
| HZT03_RS17805 (3652809) | 3652809..3653522 | + | 714 | WP_000075760.1 | sporulation transcriptional regulator SpoIIID | - |
| HZT03_RS17810 (3653519) | 3653519..3654154 | + | 636 | WP_000772020.1 | hypothetical protein | - |
| HZT03_RS17815 (3654190) | 3654190..3654642 | + | 453 | WP_001020418.1 | hypothetical protein | - |
| HZT03_RS17820 (3654639) | 3654639..3655091 | + | 453 | WP_000734138.1 | hypothetical protein | - |
| HZT03_RS17825 (3655154) | 3655154..3655696 | + | 543 | WP_001104018.1 | DUF4339 domain-containing protein | - |
| HZT03_RS17830 (3655755) | 3655755..3656207 | + | 453 | WP_001061894.1 | IrmA family protein | - |
| HZT03_RS17835 (3656284) | 3656284..3656517 | + | 234 | WP_001114682.1 | DUF905 domain-containing protein | - |
| HZT03_RS17840 (3656637) | 3656637..3657455 | + | 819 | WP_152961050.1 | DUF932 domain-containing protein | - |
| HZT03_RS17845 (3657723) | 3657723..3658193 | + | 471 | WP_000131762.1 | antirestriction protein | - |
| HZT03_RS17850 (3658205) | 3658205..3658684 | + | 480 | WP_000437750.1 | DNA repair protein RadC | - |
| HZT03_RS17855 (3658705) | 3658705..3658926 | + | 222 | WP_000691981.1 | DUF987 domain-containing protein | - |
| HZT03_RS17860 (3658950) | 3658950..3659309 | + | 360 | WP_000066236.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HZT03_RS17865 (3659360) | 3659360..3659737 | + | 378 | WP_001194695.1 | TA system toxin CbtA family protein | Toxin Detail |
| HZT03_RS17870 (3659734) | 3659734..3660225 | + | 492 | WP_000777682.1 | DUF5983 family protein | - |
| HZT03_RS17875 (3660257) | 3660257..3660460 | + | 204 | WP_000413747.1 | DUF957 domain-containing protein | - |
| HZT03_RS17880 (3660541) | 3660541..3661385 | + | 845 | Protein_3514 | DUF4942 domain-containing protein | - |
| HZT03_RS17890 (3661727) | 3661727..3662458 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| HZT03_RS17895 (3662523) | 3662523..3662990 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| HZT03_RS17900 (3662987) | 3662987..3663709 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| HZT03_RS17905 (3663743) | 3663743..3664498 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| HZT03_RS17910 (3664570) | 3664570..3665928 | + | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| HZT03_RS17915 (3666014) | 3666014..3666448 | - | 435 | WP_038989254.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| HZT03_RS17920 (3666605) | 3666605..3667375 | - | 771 | WP_165467681.1 | class I SAM-dependent methyltransferase | - |
| HZT03_RS17925 (3667453) | 3667453..3668253 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| HZT03_RS17930 (3668494) | 3668494..3669408 | + | 915 | WP_039060881.1 | HTH-type transcriptional regulator DmlR | VF |
| HZT03_RS17935 (3669405) | 3669405..3670208 | - | 804 | WP_094337017.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|