MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP058725 Location: 2645759..2655110 Organism: Escherichia coli strain S171-1 Replicon: chromosome
Accession: NZ_CP058725 Location: 2645759..2655110 Organism: Escherichia coli strain S171-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS87_RS13030 (2640920) | 2640920..2642221 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| HZS87_RS13035 (2642337) | 2642337..2642675 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HZS87_RS13040 (2642651) | 2642651..2644348 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| HZS87_RS13045 (2644385) | 2644385..2644960 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| HZS87_RS13055 (2645759) | 2645759..2647297 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HZS87_RS13060 (2647663) | 2647663..2648997 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HZS87_RS13065 (2649077) | 2649077..2651224 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HZS87_RS13070 (2651283) | 2651283..2652740 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| HZS87_RS13075 (2652977) | 2652977..2654494 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HZS87_RS13080 (2654613) | 2654613..2654786 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HZS87_RS13085 (2654814) | 2654814..2655110 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HZS87_RS13090 (2655337) | 2655337..2655609 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| HZS87_RS13095 (2655621) | 2655621..2655851 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HZS87_RS13100 (2656032) | 2656032..2657663 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| HZS87_RS13105 (2657660) | 2657660..2658379 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.003 |