MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99340 bp
Accession: NZ_CP058713 Location: 1..99340 Organism: Escherichia coli strain S163-2 Replicon: plasmid pS163-2.4
Accession: NZ_CP058713 Location: 1..99340 Organism: Escherichia coli strain S163-2 Replicon: plasmid pS163-2.4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS88_RS24785 | 995..3475 | - | 2481 | WP_239804084.1 | Outer membrane protein IcsA autotransporter | VF |
| HZS88_RS24790 | 3501..4481 | + | 981 | WP_097410882.1 | IS5 family transposase ISKpn26 | Transposase |
| HZS88_RS24795 | 5098..5583 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| HZS88_RS24800 | 5580..6302 | + | 723 | WP_050010024.1 | hypothetical protein | - |
| HZS88_RS24810 | 7339..7647 | + | 309 | Protein_6 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HZS88_RS24815 | 7941..8282 | + | 342 | WP_032666102.1 | YecR family lipoprotein | - |
| HZS88_RS24820 | 8347..8511 | + | 165 | Protein_8 | XRE family transcriptional regulator | - |
| HZS88_RS24825 | 8681..9559 | + | 879 | WP_225567671.1 | hypothetical protein | - |
| HZS88_RS24840 | 11786..12499 | - | 714 | WP_032177315.1 | Protein SapB | VF |
| HZS88_RS24845 | 12532..13767 | - | 1236 | WP_032177316.1 | MFS transporter | - |
| HZS88_RS24850 | 13780..14604 | - | 825 | WP_032203560.1 | MBL fold metallo-hydrolase | - |
| HZS88_RS24855 | 14938..17112 | + | 2175 | WP_032176963.1 | Catabolite control protein A | VF |
| HZS88_RS24860 | 17160..18176 | - | 1017 | Protein_16 | IS256 family transposase IS1414 | Transposase |
| HZS88_RS24865 | 18197..19415 | - | 1219 | Protein_17 | IS3 family transposase | - |
| HZS88_RS24870 | 19813..19968 | + | 156 | WP_032203563.1 | Hok/Gef family protein | - |
| HZS88_RS24875 | 20162..21274 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HZS88_RS24880 | 21434..21943 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| HZS88_RS24885 | 21955..22419 | - | 465 | WP_224504851.1 | hypothetical protein | - |
| HZS88_RS24890 | 22572..23387 | - | 816 | WP_104774959.1 | hypothetical protein | - |
| HZS88_RS24895 | 23397..24986 | - | 1590 | WP_032203566.1 | hypothetical protein | - |
| HZS88_RS24900 | 25046..26752 | - | 1707 | WP_106490964.1 | hypothetical protein | - |
| HZS88_RS24905 | 26978..27979 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| HZS88_RS24910 | 27996..29192 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HZS88_RS24915 | 29361..30170 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| HZS88_RS24920 | 30463..31347 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| HZS88_RS24925 | 31683..32075 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| HZS88_RS25405 | 32085..32216 | - | 132 | WP_001113883.1 | hypothetical protein | - |
| HZS88_RS24930 | 32251..32673 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| HZS88_RS24935 | 32713..33378 | - | 666 | Protein_32 | hypothetical protein | - |
| HZS88_RS24940 | 33433..34646 | + | 1214 | WP_222670868.1 | IS3 family transposase IS629 | Transposase |
| HZS88_RS24945 | 36166..37047 | - | 882 | WP_032206658.1 | RepB family plasmid replication initiator protein | - |
| HZS88_RS24950 | 37452..37817 | + | 366 | Protein_35 | DUF4165 domain-containing protein | - |
| HZS88_RS24955 | 38108..38155 | + | 48 | Protein_36 | hypothetical protein | - |
| HZS88_RS24960 | 38297..39835 | + | 1539 | WP_224706370.1 | Ig-like domain-containing protein | - |
| HZS88_RS24965 | 40178..40882 | - | 705 | Protein_38 | IS6 family transposase IS15DI | Transposase |
| HZS88_RS24970 | 40946..41068 | + | 123 | Protein_39 | IS66 family insertion sequence element accessory protein TnpB | - |
| HZS88_RS24975 | 41160..41941 | - | 782 | Protein_40 | IS21 family transposase IS100kyp | Transposase |
| HZS88_RS24980 | 41938..42561 | - | 624 | Protein_41 | IS21 family transposase IS100kyp | Transposase |
| HZS88_RS24985 | 42560..42932 | - | 373 | Protein_42 | IS1 family transposase | - |
| HZS88_RS24990 | 43552..45774 | + | 2223 | WP_239804085.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| HZS88_RS24995 | 45764..47110 | + | 1347 | WP_222670866.1 | GGDEF domain-containing protein | - |
| HZS88_RS25000 | 47157..47853 | - | 697 | Protein_45 | IS1-like element IS1A family transposase | - |
| HZS88_RS25005 | 47934..50039 | + | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| HZS88_RS25010 | 50103..52253 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| HZS88_RS25015 | 52997..54343 | + | 1347 | WP_222670251.1 | group II intron reverse transcriptase/maturase | - |
| HZS88_RS25020 | 54530..54916 | + | 387 | Protein_49 | IS200/IS605 family transposase | - |
| HZS88_RS25025 | 55249..55401 | + | 153 | Protein_50 | endo-1,4-D-glucanase | - |
| HZS88_RS25030 | 55383..58856 | + | 3474 | WP_104692566.1 | cellulose synthase complex outer membrane protein BcsC | - |
| HZS88_RS25035 | 59056..59639 | + | 584 | Protein_52 | IS1-like element IS1A family transposase | - |
| HZS88_RS25040 | 59731..60959 | + | 1229 | WP_239804080.1 | IS3 family transposase IS2 | Transposase |
| HZS88_RS25045 | 60967..61107 | + | 141 | Protein_54 | L-threonine dehydrogenase | - |
| HZS88_RS25050 | 61262..61996 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| HZS88_RS25055 | 62086..62223 | + | 138 | WP_239804081.1 | PerC family transcriptional regulator | - |
| HZS88_RS25065 | 63521..64783 | + | 1263 | WP_239804082.1 | hypothetical protein | - |
| HZS88_RS25070 | 64856..65362 | + | 507 | WP_222670982.1 | 3'-phosphatase | - |
| HZS88_RS25075 | 65629..68745 | - | 3117 | WP_072663770.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HZS88_RS25080 | 68867..70132 | - | 1266 | WP_106693635.1 | restriction endonuclease subunit S | - |
| HZS88_RS25085 | 70129..71685 | - | 1557 | WP_038997084.1 | type I restriction-modification system subunit M | - |
| HZS88_RS25090 | 71868..72089 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HZS88_RS25095 | 72089..72469 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HZS88_RS25100 | 72474..72653 | + | 180 | WP_038997082.1 | hypothetical protein | - |
| HZS88_RS25105 | 72681..73598 | + | 918 | Protein_66 | hypothetical protein | - |
| HZS88_RS25110 | 73655..74352 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| HZS88_RS25115 | 74377..74502 | + | 126 | Protein_68 | phage antirepressor Ant | - |
| HZS88_RS25120 | 74623..74955 | + | 333 | WP_224205061.1 | phage antirepressor KilAC domain-containing protein | - |
| HZS88_RS25125 | 74988..75839 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| HZS88_RS25130 | 75950..76159 | - | 210 | WP_072663797.1 | c1 repressor inactivator | - |
| HZS88_RS25135 | 76347..77327 | + | 981 | WP_097410882.1 | IS5 family transposase ISKpn26 | Transposase |
| HZS88_RS25140 | 77963..78184 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| HZS88_RS25145 | 78192..79223 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| HZS88_RS25150 | 79274..79585 | + | 312 | WP_016246567.1 | hypothetical protein | - |
| HZS88_RS25155 | 79934..80276 | + | 343 | Protein_76 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZS88_RS25160 | 80295..81809 | - | 1515 | Protein_77 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HZS88_RS25165 | 81875..82579 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HZS88_RS25170 | 82525..83184 | - | 660 | Protein_79 | SprT-like domain-containing protein | - |
| HZS88_RS25175 | 83468..84124 | - | 657 | WP_012537714.1 | Pentapeptide repeat protein | ARG |
| HZS88_RS25180 | 84645..85349 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HZS88_RS25185 | 85662..87239 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| HZS88_RS25190 | 87431..87745 | + | 315 | Protein_83 | helix-turn-helix domain-containing protein | - |
| HZS88_RS25195 | 87852..88181 | - | 330 | WP_233142237.1 | ester cyclase | - |
| HZS88_RS25200 | 88262..89251 | - | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| HZS88_RS25205 | 89267..90043 | - | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| HZS88_RS25210 | 90316..90648 | + | 333 | Protein_87 | Ref family protein | - |
| HZS88_RS25215 | 90864..91481 | + | 618 | WP_001395494.1 | hypothetical protein | - |
| HZS88_RS25220 | 91535..92224 | - | 690 | WP_000452096.1 | EAL domain-containing protein | - |
| HZS88_RS25225 | 92459..93180 | + | 722 | Protein_90 | helix-turn-helix domain-containing protein | - |
| HZS88_RS25230 | 93219..93467 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| HZS88_RS25235 | 93464..93904 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| HZS88_RS25240 | 93938..97906 | - | 3969 | Protein_93 | helicase-related protein | - |
| HZS88_RS25245 | 98489..98740 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HZS88_RS25250 | 98737..99024 | + | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|