MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 73655 bp
Accession: NZ_CP058692 Location: 1..73655 Organism: Paracoccus pantotrophus strain ACCC10489 Replicon: plasmid unnamed2
Accession: NZ_CP058692 Location: 1..73655 Organism: Paracoccus pantotrophus strain ACCC10489 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYQ43_RS22610 () | 258..551 | - | 294 | WP_024846137.1 | antibiotic biosynthesis monooxygenase | - |
| HYQ43_RS22615 () | 548..1906 | - | 1359 | WP_179922355.1 | flagellar biosynthesis protein FlgA | - |
| HYQ43_RS22620 () | 2084..2995 | - | 912 | WP_024846139.1 | LysR family transcriptional regulator | - |
| HYQ43_RS22625 () | 3363..3659 | + | 297 | Protein_4 | type II toxin-antitoxin system VapC family toxin | - |
| HYQ43_RS22630 () | 3751..4818 | - | 1068 | WP_024845494.1 | hypothetical protein | - |
| HYQ43_RS22635 () | 5045..5929 | + | 885 | WP_074991447.1 | Tn3 family transposase ISPsy42 | Transposase |
| HYQ43_RS22640 () | 6008..6403 | - | 396 | WP_024845492.1 | PIN domain-containing protein | Toxin Detail |
| HYQ43_RS22645 () | 6393..6620 | - | 228 | WP_024845491.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HYQ43_RS22650 () | 6830..8023 | + | 1194 | WP_010400282.1 | Sporulation initiation inhibitor protein Soj | VF |
| HYQ43_RS22655 () | 8007..8939 | + | 933 | WP_024845490.1 | plasmid partitioning protein RepB | - |
| HYQ43_RS22660 () | 9152..10363 | + | 1212 | WP_024845489.1 | replication initiation protein RepC | - |
| HYQ43_RS22665 () | 10563..11401 | - | 839 | Protein_12 | IS3 family transposase ISOba1 | Transposase |
| HYQ43_RS22670 () | 11612..12295 | + | 684 | WP_179922357.1 | IS6 family transposase ISPmar1 | Transposase |
| HYQ43_RS22675 () | 12411..13127 | - | 717 | WP_024845488.1 | FadR family transcriptional regulator | - |
| HYQ43_RS22680 () | 13241..14545 | + | 1305 | WP_179922359.1 | FAD-dependent oxidoreductase | - |
| HYQ43_RS22685 () | 15081..16121 | + | 1041 | WP_179922361.1 | ABC transporter substrate-binding protein | - |
| HYQ43_RS22690 () | 16178..17257 | + | 1080 | WP_179922363.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HYQ43_RS22695 () | 17254..18105 | + | 852 | WP_179922365.1 | ABC transporter permease | - |
| HYQ43_RS22700 () | 18098..18916 | + | 819 | WP_179922367.1 | ABC transporter permease | - |
| HYQ43_RS22705 () | 18954..20513 | + | 1560 | WP_179922369.1 | FAD-dependent oxidoreductase | - |
| HYQ43_RS22710 () | 20703..21047 | + | 345 | WP_024845481.1 | RidA family protein | - |
| HYQ43_RS22715 () | 21474..21902 | + | 429 | WP_028710876.1 | IS66 family transposase ISPpa7 | Transposase |
| HYQ43_RS22720 () | 21899..22252 | + | 354 | WP_119900830.1 | IS66 family transposase ISPpa7 | Transposase |
| HYQ43_RS22725 () | 22316..23989 | + | 1674 | WP_076611989.1 | IS66 family transposase ISPpa7 | Transposase |
| HYQ43_RS22730 () | 24178..25062 | - | 885 | WP_024845505.1 | MurR/RpiR family transcriptional regulator | - |
| HYQ43_RS22735 () | 25348..26280 | + | 933 | WP_179922371.1 | IS5 family transposase ISPpa4 | Transposase |
| HYQ43_RS22740 () | 26428..27228 | + | 801 | WP_179922373.1 | N-formylglutamate amidohydrolase | - |
| HYQ43_RS22745 () | 27275..28642 | + | 1368 | WP_179922375.1 | glutamine synthetase family protein | - |
| HYQ43_RS22750 () | 28662..30047 | + | 1386 | WP_024845500.1 | aldehyde dehydrogenase family protein | - |
| HYQ43_RS22755 () | 30044..31198 | + | 1155 | WP_179922377.1 | iron-containing alcohol dehydrogenase | - |
| HYQ43_RS22760 () | 31321..32283 | + | 963 | WP_024845498.1 | pyridoxal-phosphate dependent enzyme | - |
| HYQ43_RS22765 () | 32280..33443 | + | 1164 | WP_179922379.1 | DSD1 family PLP-dependent enzyme | - |
| HYQ43_RS22770 () | 33443..34408 | + | 966 | WP_179922381.1 | ornithine cyclodeaminase family protein | - |
| HYQ43_RS22775 () | 34451..34645 | - | 195 | WP_179922383.1 | hypothetical protein | - |
| HYQ43_RS22780 () | 34694..34958 | + | 265 | Protein_35 | recombinase family protein | - |
| HYQ43_RS22785 () | 34931..35518 | + | 588 | WP_143091334.1 | hypothetical protein | Relaxase |
| HYQ43_RS22790 () | 35515..37386 | + | 1872 | WP_179922385.1 | T-DNA border endonuclease VirD2 | Relaxase |
| HYQ43_RS22795 () | 37469..39421 | - | 1953 | WP_179922307.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HYQ43_RS22800 () | 39430..40485 | - | 1056 | WP_179922309.1 | hypothetical protein | - |
| HYQ43_RS22805 () | 40532..41536 | - | 1005 | WP_179922311.1 | Type IV secretion system protein VirB11 | VF |
| HYQ43_RS22810 () | 41536..42087 | - | 552 | WP_179922387.1 | Type IV secretion system protein virB10 | VF |
| HYQ43_RS22815 () | 42124..43313 | + | 1190 | WP_114669626.1 | IS3 family transposase ISOba1 | Transposase |
| HYQ43_RS22820 () | 43318..44154 | - | 837 | WP_179922313.1 | hypothetical protein | - |
| HYQ43_RS22825 () | 44165..44896 | - | 732 | WP_074991190.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HYQ43_RS22830 () | 44893..45207 | - | 315 | WP_179922315.1 | Protein virB8 | VF |
| HYQ43_RS22835 () | 45333..45584 | + | 252 | WP_179922317.1 | hypothetical protein | - |
| HYQ43_RS22840 () | 45900..47147 | + | 1248 | WP_179922319.1 | hypothetical protein | - |
| HYQ43_RS22845 () | 47135..47491 | + | 357 | WP_058096858.1 | hypothetical protein | - |
| HYQ43_RS22850 () | 47507..48076 | - | 570 | WP_058096857.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HYQ43_RS22855 () | 48260..48460 | + | 201 | WP_058096856.1 | hypothetical protein | - |
| HYQ43_RS22860 () | 48457..49659 | - | 1203 | WP_074991438.1 | UMUC-like DNA-repair protein | - |
| HYQ43_RS22865 () | 49732..50043 | + | 312 | WP_143091325.1 | hypothetical protein | - |
| HYQ43_RS22870 () | 50038..50217 | - | 180 | WP_074991439.1 | hypothetical protein | - |
| HYQ43_RS22875 () | 50292..50969 | + | 678 | WP_179922389.1 | SOS response-associated peptidase | - |
| HYQ43_RS22880 () | 50974..51210 | + | 237 | WP_179922321.1 | hypothetical protein | - |
| HYQ43_RS22885 () | 51481..52041 | - | 561 | WP_179922391.1 | TIGR02444 family protein | - |
| HYQ43_RS22890 () | 52044..53426 | - | 1383 | WP_179922323.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HYQ43_RS22895 () | 53423..53737 | - | 315 | WP_179922325.1 | (2Fe-2S)-binding protein | - |
| HYQ43_RS22900 () | 53718..54833 | - | 1116 | WP_179922327.1 | FAD-binding oxidoreductase | - |
| HYQ43_RS22905 () | 54830..55543 | - | 714 | WP_179922329.1 | aspartate/glutamate racemase family protein | - |
| HYQ43_RS22910 () | 55540..56133 | - | 594 | WP_179922331.1 | UbiX family flavin prenyltransferase | - |
| HYQ43_RS22915 () | 56135..57466 | - | 1332 | WP_179922333.1 | UbiD family decarboxylase | - |
| HYQ43_RS22920 () | 57500..58252 | - | 753 | WP_179922335.1 | histidine utilization repressor | - |
| HYQ43_RS22925 () | 58549..60039 | + | 1491 | WP_179922337.1 | aldehyde dehydrogenase | - |
| HYQ43_RS22930 () | 60045..61739 | + | 1695 | WP_179922339.1 | thiamine pyrophosphate-binding protein | - |
| HYQ43_RS22935 () | 61837..62859 | + | 1023 | WP_179922341.1 | ABC transporter substrate-binding protein | - |
| HYQ43_RS22940 () | 62949..64034 | + | 1086 | WP_179922343.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| HYQ43_RS22945 () | 64038..64898 | + | 861 | WP_179922345.1 | ABC transporter permease | - |
| HYQ43_RS22950 () | 64895..65689 | + | 795 | WP_179922347.1 | ABC transporter permease | - |
| HYQ43_RS22955 () | 65740..66123 | + | 384 | WP_179922349.1 | RidA family protein | - |
| HYQ43_RS22960 () | 66187..66944 | + | 758 | WP_179921653.1 | IS5 family transposase IS1248A | Transposase |
| HYQ43_RS22965 () | 67259..67438 | + | 180 | WP_029372792.1 | hypothetical protein | - |
| HYQ43_RS22970 () | 67627..68052 | - | 426 | WP_083413964.1 | type II toxin-antitoxin system VapC family toxin | - |
| HYQ43_RS22975 () | 68052..68297 | - | 246 | WP_074991563.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| HYQ43_RS22980 () | 68363..68512 | + | 150 | WP_179922351.1 | hypothetical protein | - |
| HYQ43_RS22985 () | 68539..68781 | + | 243 | WP_143091339.1 | hypothetical protein | - |
| HYQ43_RS22990 () | 68816..69600 | - | 785 | Protein_77 | IS5 family transposase | - |
| HYQ43_RS22995 () | 69666..70163 | - | 498 | WP_179922393.1 | gluconokinase | - |
| HYQ43_RS23000 () | 70184..71455 | - | 1272 | WP_024846133.1 | TRAP transporter large permease | - |
| HYQ43_RS23005 () | 71452..71937 | - | 486 | WP_179922353.1 | TRAP transporter small permease subunit | - |
| HYQ43_RS23010 () | 71992..73014 | - | 1023 | WP_024846135.1 | DctP family TRAP transporter solute-binding subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|