MGE detailed information
MGE type: Genomic_island MGE length: 15184 bp
Accession: NZ_CP058661 Location: 3112644..3127827 Organism: Escherichia coli strain 005008 Replicon: chromosome
Accession: NZ_CP058661 Location: 3112644..3127827 Organism: Escherichia coli strain 005008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZR83_RS14855 () | 3109459..3111144 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| HZR83_RS14860 () | 3111347..3111469 | + | 123 | WP_120795387.1 | protein YneP | - |
| HZR83_RS14865 () | 3111435..3112592 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| HZR83_RS14870 () | 3112644..3114326 | - | 1683 | WP_001295684.1 | sulfatase | - |
| HZR83_RS14875 () | 3114728..3115489 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| HZR83_RS14880 () | 3115564..3115761 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| HZR83_RS14885 () | 3116009..3118288 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| HZR83_RS14890 () | 3118622..3119536 | - | 915 | WP_000520662.1 | hypothetical protein | VF |
| HZR83_RS14895 () | 3119595..3120098 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| HZR83_RS14900 () | 3120111..3120398 | - | 288 | Protein_2897 | hypothetical protein | VF |
| HZR83_RS14905 () | 3120440..3120913 | - | 474 | Protein_2898 | IS3 family transposase IS629 | Transposase |
| HZR83_RS14910 () | 3121003..3122511 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HZR83_RS14915 () | 3123184..3123923 | - | 740 | Protein_2900 | IS3 family transposase IS629 | Transposase |
| HZR83_RS14920 () | 3123979..3124224 | - | 246 | Protein_2901 | hypothetical protein | VF |
| HZR83_RS14925 () | 3124238..3125464 | - | 1227 | Protein_2902 | hypothetical protein | VF |
| HZR83_RS14930 () | 3125719..3125927 | - | 209 | Protein_2903 | helix-turn-helix transcriptional regulator | - |
| HZR83_RS14935 () | 3126239..3127561 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HZR83_RS14940 () | 3127561..3127827 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HZR83_RS14945 () | 3128050..3129450 | - | 1401 | WP_001083595.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.008 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.01 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.008 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.008 |