MGE detailed information
MGE type: Conjugative plasmid MGE length: 77194 bp
Accession: NZ_CP058576 Location: 1..77194 Organism: Escherichia coli strain EC1 Replicon: plasmid pEC1-2
Accession: NZ_CP058576 Location: 1..77194 Organism: Escherichia coli strain EC1 Replicon: plasmid pEC1-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYH05_RS25230 () | 1..1362 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HYH05_RS25235 () | 1409..1972 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| HYH05_RS25240 () | 2058..2531 | - | 474 | WP_179226630.1 | hypothetical protein | - |
| HYH05_RS25245 () | 2833..3360 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HYH05_RS25250 () | 3418..3624 | + | 207 | Protein_4 | DUF905 family protein | - |
| HYH05_RS25255 () | 3625..4248 | + | 624 | Protein_5 | plasmid SOS inhibition protein A | - |
| HYH05_RS25260 () | 4260..4448 | - | 189 | WP_179226631.1 | protein sok | - |
| - () | 4260..4484 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4260..4484 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4260..4484 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4260..4484 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4417..4482 | - | 66 | - | - | Antitoxin Detail |
| HYH05_RS25265 () | 4528..4686 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HYH05_RS25270 () | 4924..5301 | - | 378 | Protein_8 | hypothetical protein | - |
| HYH05_RS25275 () | 5601..5897 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HYH05_RS25280 () | 6008..6829 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HYH05_RS25285 () | 7126..7728 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| HYH05_RS25290 () | 8051..8434 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| HYH05_RS25295 () | 8628..9299 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| HYH05_RS25300 () | 9436..9663 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| HYH05_RS25305 () | 9696..10055 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| HYH05_RS25310 () | 10070..10381 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| HYH05_RS25315 () | 10403..10969 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| HYH05_RS25320 () | 10956..11684 | + | 729 | WP_001230766.1 | type-F conjugative transfer system secretin TraK | - |
| HYH05_RS25325 () | 11684..13135 | + | 1452 | WP_179226632.1 | conjugal transfer protein TraB | - |
| HYH05_RS25330 () | 13104..13643 | + | 540 | WP_179226633.1 | conjugal transfer protein TraP | - |
| HYH05_RS25335 () | 13625..16213 | + | 2589 | WP_179226636.1 | type IV secretion system protein TraC | - |
| HYH05_RS25340 () | 16210..16596 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| HYH05_RS25345 () | 16593..17225 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| HYH05_RS25350 () | 17222..18214 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HYH05_RS25355 () | 18244..18549 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| HYH05_RS25360 () | 18558..19196 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HYH05_RS25365 () | 19193..21043 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HYH05_RS25370 () | 21070..21327 | + | 258 | WP_179226637.1 | conjugal transfer protein TrbE | - |
| HYH05_RS25375 () | 21320..22063 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HYH05_RS25380 () | 22077..22421 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| HYH05_RS25385 () | 22540..22824 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HYH05_RS25390 () | 22811..23356 | + | 546 | WP_000059828.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HYH05_RS25395 () | 23286..23645 | + | 360 | WP_179226634.1 | P-type conjugative transfer protein TrbJ | - |
| HYH05_RS25400 () | 23618..24006 | + | 389 | Protein_34 | F-type conjugal transfer protein TrbF | - |
| HYH05_RS25405 () | 23993..25366 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| HYH05_RS25410 () | 25363..28185 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HYH05_RS25415 () | 28201..28686 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| HYH05_RS25420 () | 28735..29466 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| HYH05_RS25425 () | 29669..30406 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| HYH05_RS25430 () | 30457..32727 | + | 2271 | WP_000009328.1 | type IV conjugative transfer system coupling protein TraD | - |
| HYH05_RS25435 () | 32727..37997 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| HYH05_RS25440 () | 38017..38793 | + | 777 | WP_179226635.1 | conjugal transfer pilus acetylase TraX | - |
| HYH05_RS25445 () | 38818..39678 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| HYH05_RS25450 () | 39781..40341 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| HYH05_RS25455 () | 40470..40682 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| HYH05_RS25460 () | 40927..41388 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| HYH05_RS25465 () | 41434..41643 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| HYH05_RS25470 () | 41681..42271 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| HYH05_RS25475 () | 42511..42765 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| HYH05_RS25480 () | 43003..43077 | + | 75 | WP_179226638.1 | RepA leader peptide Tap | - |
| HYH05_RS25485 () | 43070..43927 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| HYH05_RS25490 () | 44866..45519 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HYH05_RS25495 () | 45612..45869 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HYH05_RS25500 () | 45802..46203 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HYH05_RS25505 () | 46452..46867 | + | 416 | Protein_55 | IS1 family transposase IS1R | Transposase |
| HYH05_RS25510 () | 46903..47448 | - | 546 | Protein_56 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HYH05_RS25515 () | 47514..48218 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HYH05_RS25520 () | 48286..48612 | - | 327 | Protein_58 | nucleotidyltransferase domain-containing protein | - |
| HYH05_RS25525 () | 48743..49216 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| HYH05_RS25530 () | 49373..50053 | + | 681 | Protein_60 | IS91 family transposase ISAzo26 | Transposase |
| HYH05_RS25535 () | 50118..50822 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HYH05_RS25540 () | 50876..51547 | + | 672 | Protein_62 | winged helix-turn-helix domain-containing protein | - |
| HYH05_RS25545 () | 51547..52065 | + | 519 | WP_034169467.1 | hypothetical protein | - |
| HYH05_RS25550 () | 52070..52486 | - | 417 | WP_034169466.1 | Glutathione transferase FosA | ARG |
| HYH05_RS25555 () | 52872..53555 | + | 684 | WP_102969868.1 | IS6 family transposase IS15DII | Transposase |
| HYH05_RS25560 () | 53630..53884 | + | 255 | Protein_66 | SDR family oxidoreductase | - |
| HYH05_RS25565 () | 53980..54624 | - | 645 | WP_017900990.1 | Pentapeptide repeat protein | ARG |
| HYH05_RS25570 () | 54707..55681 | - | 975 | WP_004193248.1 | Psp operon transcriptional activator | VF |
| HYH05_RS25575 () | 55852..56519 | + | 668 | Protein_69 | phage shock protein PspA | - |
| HYH05_RS25580 () | 56574..56798 | + | 225 | WP_004193245.1 | envelope stress response membrane protein PspB | - |
| HYH05_RS25585 () | 56798..57157 | + | 360 | WP_004193243.1 | envelope stress response membrane protein PspC | - |
| HYH05_RS25590 () | 57166..57396 | + | 231 | WP_004193241.1 | phage shock protein PspD | - |
| HYH05_RS25595 () | 57585..57755 | - | 171 | Protein_73 | LacI family transcriptional regulator | - |
| HYH05_RS25600 () | 57758..58552 | - | 795 | Protein_74 | alpha-2-macroglobulin family protein | - |
| HYH05_RS25605 () | 58747..59885 | - | 1139 | Protein_75 | Beta-lactamase | ARG |
| HYH05_RS25610 () | 59996..60871 | + | 876 | WP_004193231.1 | LysR family transcriptional regulator AmpR | - |
| HYH05_RS25615 () | 60875..61240 | - | 366 | WP_025999322.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| HYH05_RS25620 () | 61133..61468 | + | 336 | WP_052238321.1 | ethidium bromide resistance protein | - |
| HYH05_RS25625 () | 61462..62301 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HYH05_RS25630 () | 62429..62632 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| HYH05_RS25635 () | 62788..63993 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| HYH05_RS25640 () | 64004..64309 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| HYH05_RS25645 () | 64353..64418 | + | 66 | Protein_83 | EAL domain-containing protein | - |
| HYH05_RS25650 () | 64536..65300 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HYH05_RS25655 () | 65793..66377 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HYH05_RS25660 () | 66377..67615 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| HYH05_RS25665 () | 67612..68517 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HYH05_RS25670 () | 68639..69343 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HYH05_RS25675 () | 69597..69831 | + | 235 | Protein_89 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HYH05_RS25680 () | 69959..70240 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| HYH05_RS25685 () | 70377..70712 | - | 336 | WP_099723228.1 | plasmid partitioning/stability family protein | - |
| HYH05_RS25690 () | 70715..71677 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HYH05_RS25695 () | 71825..72118 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HYH05_RS25700 () | 72195..72878 | + | 684 | WP_000085883.1 | DNA methylase | - |
| HYH05_RS25705 () | 72879..73100 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HYH05_RS25710 () | 73114..73548 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HYH05_RS25715 () | 73599..74375 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| HYH05_RS25720 () | 74916..75218 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HYH05_RS25725 () | 75265..75687 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HYH05_RS25730 () | 75684..75875 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HYH05_RS25735 () | 76913..77143 | + | 231 | WP_000218642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|