MGE detailed information
MGE type: Genomic_island MGE length: 41212 bp
Accession: NZ_CP058349 Location: 3952313..3993524 Organism: Pseudomonas sp. ABC1 Replicon: chromosome
Accession: NZ_CP058349 Location: 3952313..3993524 Organism: Pseudomonas sp. ABC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW090_RS17405 () | 3947875..3948069 | + | 195 | WP_179114706.1 | 50S ribosomal protein L35 | - |
| HW090_RS17410 () | 3948097..3948453 | + | 357 | WP_179114707.1 | 50S ribosomal protein L20 | - |
| HW090_RS17415 () | 3948604..3949608 | + | 1005 | WP_179114708.1 | phenylalanine--tRNA ligase subunit alpha | - |
| HW090_RS17420 () | 3949636..3952026 | + | 2391 | WP_179114709.1 | phenylalanine--tRNA ligase subunit beta | - |
| HW090_RS17425 () | 3952030..3952332 | + | 303 | WP_179114710.1 | integration host factor subunit alpha | - |
| HW090_RS17430 () | 3952313..3952669 | + | 357 | WP_179114711.1 | MerR family transcriptional regulator | - |
| HW090_RS17440 () | 3952967..3953226 | + | 260 | Protein_3416 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HW090_RS17445 () | 3953227..3953850 | - | 624 | WP_179114712.1 | His-Xaa-Ser repeat protein HxsA | - |
| HW090_RS17450 () | 3953847..3955076 | - | 1230 | WP_179114713.1 | His-Xaa-Ser system radical SAM maturase HxsC | - |
| HW090_RS17455 () | 3955079..3956563 | - | 1485 | WP_179114956.1 | His-Xaa-Ser system radical SAM maturase HxsB | - |
| HW090_RS17460 () | 3956571..3956873 | - | 303 | WP_179114714.1 | His-Xaa-Ser system protein HxsD | - |
| HW090_RS17465 () | 3957195..3957512 | + | 318 | WP_179114957.1 | helix-turn-helix transcriptional regulator | - |
| HW090_RS17470 () | 3957505..3958767 | + | 1263 | WP_179114715.1 | type II toxin-antitoxin system HipA family toxin | - |
| HW090_RS17475 () | 3958987..3959148 | - | 162 | WP_179114716.1 | hypothetical protein | - |
| HW090_RS17480 () | 3959223..3960065 | - | 843 | WP_179114717.1 | hypothetical protein | - |
| HW090_RS17485 () | 3960617..3960844 | + | 228 | WP_179114718.1 | AlpA family transcriptional regulator | - |
| HW090_RS17490 () | 3961188..3962159 | + | 972 | WP_179114719.1 | inovirus-type Gp2 protein | - |
| HW090_RS17495 () | 3962573..3965890 | + | 3318 | WP_179114958.1 | hypothetical protein | - |
| HW090_RS17500 () | 3966174..3966950 | + | 777 | WP_179114720.1 | hypothetical protein | - |
| HW090_RS17505 () | 3967112..3967969 | + | 858 | WP_179114721.1 | DUF4263 domain-containing protein | - |
| HW090_RS17510 () | 3968738..3969814 | - | 1077 | WP_179114722.1 | hypothetical protein | - |
| HW090_RS17515 () | 3969894..3970355 | - | 462 | WP_179114723.1 | hypothetical protein | - |
| HW090_RS17520 () | 3970524..3971093 | - | 570 | WP_179114724.1 | DUF4339 domain-containing protein | - |
| HW090_RS17525 () | 3971274..3971621 | + | 348 | WP_179114725.1 | helix-turn-helix domain-containing protein | - |
| HW090_RS17530 () | 3972009..3972197 | - | 189 | WP_179114726.1 | hypothetical protein | - |
| HW090_RS17535 () | 3972214..3972711 | - | 498 | WP_179114727.1 | DNA repair protein RadC | - |
| HW090_RS17540 () | 3972767..3973681 | - | 915 | WP_179114728.1 | hypothetical protein | - |
| HW090_RS17545 () | 3973762..3974766 | - | 1005 | WP_179114729.1 | YqaJ viral recombinase family protein | - |
| HW090_RS17550 () | 3974927..3975157 | + | 231 | WP_179114730.1 | antitoxin | Antitoxin Detail |
| HW090_RS17555 () | 3975157..3975561 | + | 405 | WP_179114731.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HW090_RS17560 () | 3975635..3976603 | - | 969 | WP_179114732.1 | DUF932 domain-containing protein | - |
| HW090_RS17565 () | 3976721..3976987 | + | 267 | WP_179114733.1 | hypothetical protein | - |
| HW090_RS17570 () | 3977138..3977844 | - | 707 | Protein_3442 | transposase | - |
| HW090_RS17575 () | 3977916..3978104 | - | 189 | WP_179114959.1 | formate dehydrogenase subunit delta | - |
| HW090_RS17580 () | 3978247..3978566 | - | 320 | Protein_3444 | hypothetical protein | - |
| HW090_RS17585 () | 3978848..3979723 | - | 876 | WP_179114734.1 | WYL domain-containing protein | - |
| HW090_RS17590 () | 3980033..3981154 | + | 1122 | WP_179114735.1 | DNA repair exonuclease | - |
| HW090_RS17595 () | 3981151..3983790 | + | 2640 | WP_179114736.1 | AAA family ATPase | - |
| HW090_RS17600 () | 3983834..3987751 | + | 3918 | WP_179114737.1 | hypothetical protein | - |
| HW090_RS17605 () | 3987748..3989832 | + | 2085 | WP_179114738.1 | hypothetical protein | - |
| HW090_RS17610 () | 3990272..3992221 | + | 1950 | WP_179114739.1 | type I restriction-modification system subunit M | - |
| HW090_RS17615 () | 3992211..3993524 | + | 1314 | WP_179114740.1 | restriction endonuclease subunit S | - |
| HW090_RS17620 () | 3993521..3994756 | + | 1236 | WP_179114741.1 | PD-(D/E)XK nuclease family protein | - |
| HW090_RS17625 () | 3994835..3997030 | + | 2196 | WP_179114742.1 | anti-phage defense ZorAB system ZorA | - |
| HW090_RS17630 () | 3997045..3997782 | + | 738 | WP_179114743.1 | OmpA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|