MGE detailed information
MGE type: Prophage MGE length: 52811 bp
Accession: NZ_CP058347 Location: 803667..856477 Organism: Treponema denticola strain OKA3 Replicon: chromosome
Accession: NZ_CP058347 Location: 803667..856477 Organism: Treponema denticola strain OKA3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4N90_RS03680 (E4N90_03665) | 798841..799275 | - | 435 | WP_253703177.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| E4N90_RS03685 (E4N90_03670) | 799310..800512 | - | 1203 | WP_253703179.1 | SufS family cysteine desulfurase | - |
| E4N90_RS03690 (E4N90_03675) | 800652..800915 | + | 264 | WP_002668320.1 | hypothetical protein | - |
| E4N90_RS03695 (E4N90_03680) | 800884..801240 | + | 357 | WP_002668322.1 | helix-turn-helix domain-containing protein | - |
| E4N90_RS03700 (E4N90_03685) | 801699..801965 | + | 267 | WP_253703181.1 | hypothetical protein | - |
| E4N90_RS03705 (E4N90_03690) | 801976..802584 | + | 609 | WP_253703183.1 | LexA family transcriptional regulator | - |
| E4N90_RS03710 (E4N90_03695) | 802732..803046 | + | 315 | WP_253703185.1 | hypothetical protein | - |
| E4N90_RS03715 (E4N90_03700) | 803096..803596 | - | 501 | WP_253703187.1 | hypothetical protein | - |
| E4N90_RS03720 (E4N90_03705) | 803667..804401 | - | 735 | WP_253703188.1 | antA/AntB antirepressor family protein | - |
| E4N90_RS03725 (E4N90_03710) | 804465..805064 | - | 600 | WP_253703190.1 | hypothetical protein | - |
| E4N90_RS03730 (E4N90_03715) | 805054..805404 | - | 351 | WP_253703191.1 | helix-turn-helix transcriptional regulator | - |
| E4N90_RS03735 (E4N90_03720) | 805529..805732 | + | 204 | WP_253703193.1 | hypothetical protein | - |
| E4N90_RS03740 (E4N90_03725) | 805852..806070 | + | 219 | WP_253678587.1 | hypothetical protein | - |
| E4N90_RS03745 (E4N90_03730) | 806067..806426 | + | 360 | WP_253703195.1 | hypothetical protein | - |
| E4N90_RS03750 (E4N90_03735) | 806423..806665 | + | 243 | WP_253703196.1 | hypothetical protein | - |
| E4N90_RS03755 (E4N90_03740) | 806684..806899 | + | 216 | WP_253703198.1 | hypothetical protein | - |
| E4N90_RS03760 (E4N90_03745) | 806904..807308 | + | 405 | WP_253703200.1 | single-stranded DNA-binding protein | - |
| E4N90_RS03765 (E4N90_03750) | 807327..808046 | + | 720 | WP_016512075.1 | ParA family protein | - |
| E4N90_RS03770 (E4N90_03755) | 808039..809097 | + | 1059 | WP_253703202.1 | ParB/RepB/Spo0J family partition protein | - |
| E4N90_RS03775 (E4N90_03760) | 809097..809360 | + | 264 | WP_253703203.1 | hypothetical protein | - |
| E4N90_RS03780 (E4N90_03765) | 809354..810376 | + | 1023 | WP_253703205.1 | site-specific DNA-methyltransferase | - |
| E4N90_RS03785 (E4N90_03770) | 810399..810941 | + | 543 | WP_253703207.1 | hypothetical protein | - |
| E4N90_RS03790 (E4N90_03775) | 810938..811687 | + | 750 | WP_253703209.1 | DNA cytosine methyltransferase | - |
| E4N90_RS03795 (E4N90_03780) | 811684..814725 | + | 3042 | WP_253703210.1 | toprim domain-containing protein | - |
| E4N90_RS03800 (E4N90_03785) | 814736..815062 | + | 327 | WP_253703212.1 | hypothetical protein | - |
| E4N90_RS03805 (E4N90_03790) | 815076..815780 | + | 705 | WP_016512069.1 | hypothetical protein | - |
| E4N90_RS03810 (E4N90_03795) | 815784..816320 | - | 537 | WP_253703214.1 | hypothetical protein | - |
| E4N90_RS03815 (E4N90_03800) | 816332..817063 | - | 732 | WP_253703216.1 | hypothetical protein | - |
| E4N90_RS03820 (E4N90_03805) | 817086..817787 | - | 702 | WP_253703217.1 | hypothetical protein | - |
| E4N90_RS03825 (E4N90_03810) | 817801..819018 | - | 1218 | WP_253703219.1 | baseplate J/gp47 family protein | - |
| E4N90_RS03830 (E4N90_03815) | 819008..819469 | - | 462 | WP_253703221.1 | hypothetical protein | - |
| E4N90_RS03835 (E4N90_03820) | 819469..820053 | - | 585 | WP_253703223.1 | hypothetical protein | - |
| E4N90_RS03840 (E4N90_03825) | 820044..821312 | - | 1269 | WP_253703225.1 | LysM peptidoglycan-binding domain-containing protein | - |
| E4N90_RS03845 (E4N90_03830) | 821296..822603 | - | 1308 | WP_253703226.1 | DNA circularization N-terminal domain-containing protein | - |
| E4N90_RS03850 (E4N90_03835) | 822605..824569 | - | 1965 | WP_253703228.1 | phage tail tape measure protein | - |
| E4N90_RS03855 (E4N90_03840) | 824758..825180 | - | 423 | WP_002690708.1 | hypothetical protein | - |
| E4N90_RS03860 (E4N90_03845) | 825184..825561 | - | 378 | WP_002674745.1 | hypothetical protein | - |
| E4N90_RS03865 (E4N90_03850) | 825561..827045 | - | 1485 | WP_253703230.1 | hypothetical protein | - |
| E4N90_RS03870 (E4N90_03855) | 827070..827711 | - | 642 | WP_253703232.1 | hypothetical protein | - |
| E4N90_RS03875 (E4N90_03860) | 827714..828076 | - | 363 | WP_253703233.1 | hypothetical protein | - |
| E4N90_RS03880 (E4N90_03865) | 828088..828534 | - | 447 | WP_253703235.1 | hypothetical protein | - |
| E4N90_RS03885 (E4N90_03870) | 828549..829634 | - | 1086 | WP_253703238.1 | major capsid protein | - |
| E4N90_RS03890 (E4N90_03875) | 829660..830034 | - | 375 | WP_253703240.1 | hypothetical protein | - |
| E4N90_RS03895 (E4N90_03880) | 830035..831129 | - | 1095 | WP_253703241.1 | Clp protease ClpP | - |
| E4N90_RS03900 (E4N90_03885) | 831130..831555 | - | 426 | WP_253703243.1 | hypothetical protein | - |
| E4N90_RS03905 (E4N90_03890) | 831637..831945 | - | 309 | WP_253703245.1 | NadS family protein | Antitoxin Detail |
| E4N90_RS03910 (E4N90_03895) | 831955..832263 | - | 309 | WP_253703686.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4N90_RS03915 (E4N90_03900) | 832366..832572 | - | 207 | WP_253703247.1 | helix-turn-helix domain-containing protein | - |
| E4N90_RS03920 (E4N90_03905) | 832982..833332 | - | 351 | WP_253703248.1 | hypothetical protein | - |
| E4N90_RS03925 (E4N90_03910) | 833313..833675 | - | 363 | WP_253703249.1 | hypothetical protein | - |
| E4N90_RS03930 (E4N90_03915) | 834010..834318 | + | 309 | WP_253703250.1 | BrnT family toxin | - |
| E4N90_RS03935 (E4N90_03920) | 834287..834601 | + | 315 | WP_253703251.1 | BrnA antitoxin family protein | - |
| E4N90_RS03940 (E4N90_03925) | 834713..835021 | + | 309 | WP_253703252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E4N90_RS03945 (E4N90_03930) | 835018..835335 | + | 318 | WP_253703253.1 | putative addiction module antidote protein | Antitoxin Detail |
| E4N90_RS03950 (E4N90_03935) | 835337..835621 | + | 285 | WP_016512045.1 | putative addiction module antidote protein | - |
| E4N90_RS03955 (E4N90_03940) | 835668..835865 | - | 198 | WP_253703256.1 | DNA-binding protein | - |
| E4N90_RS03960 (E4N90_03945) | 836320..836637 | - | 318 | WP_253703257.1 | hypothetical protein | - |
| E4N90_RS03965 (E4N90_03950) | 836648..836959 | - | 312 | WP_253703259.1 | DUF4406 domain-containing protein | - |
| E4N90_RS03970 (E4N90_03955) | 837022..837240 | - | 219 | WP_253703261.1 | hypothetical protein | - |
| E4N90_RS03975 (E4N90_03960) | 837215..837493 | - | 279 | WP_253703263.1 | hypothetical protein | - |
| E4N90_RS03980 (E4N90_03965) | 837496..838038 | - | 543 | WP_253703264.1 | hypothetical protein | - |
| E4N90_RS03985 (E4N90_03970) | 838083..838304 | - | 222 | WP_002674781.1 | hypothetical protein | - |
| E4N90_RS03990 (E4N90_03975) | 838327..838815 | - | 489 | WP_253703267.1 | hypothetical protein | - |
| E4N90_RS03995 (E4N90_03980) | 838808..840439 | - | 1632 | WP_253703269.1 | phage portal protein | - |
| E4N90_RS04000 (E4N90_03985) | 840433..840735 | - | 303 | WP_253703271.1 | hypothetical protein | - |
| E4N90_RS04005 (E4N90_03990) | 840792..842768 | - | 1977 | WP_253703272.1 | phage terminase large subunit family protein | - |
| E4N90_RS04010 (E4N90_03995) | 842773..843228 | - | 456 | WP_253703274.1 | DUF5662 family protein | - |
| E4N90_RS04015 (E4N90_04000) | 843244..843936 | - | 693 | WP_253703277.1 | DNA methyltransferase | - |
| E4N90_RS04020 (E4N90_04005) | 843929..844669 | - | 741 | WP_253703279.1 | hypothetical protein | - |
| E4N90_RS04025 (E4N90_04010) | 845105..846259 | - | 1155 | WP_253703281.1 | hypothetical protein ; Integrase | Integrase |
| E4N90_RS04035 (E4N90_04020) | 846520..848112 | - | 1593 | WP_253703284.1 | peptide ABC transporter substrate-binding protein | - |
| E4N90_RS04040 (E4N90_04025) | 848163..849566 | - | 1404 | WP_044956852.1 | hypothetical protein | - |
| E4N90_RS04045 (E4N90_04030) | 849676..849969 | + | 294 | WP_002668328.1 | hypothetical protein | - |
| E4N90_RS04050 (E4N90_04035) | 849975..851097 | + | 1123 | WP_253703287.1 | peptide chain release factor 2 | - |
| E4N90_RS04055 (E4N90_04040) | 851094..851414 | + | 321 | WP_002674804.1 | hypothetical protein | - |
| E4N90_RS04060 (E4N90_04045) | 851429..852970 | + | 1542 | WP_253703289.1 | hypothetical protein | - |
| E4N90_RS04065 (E4N90_04050) | 852960..853838 | + | 879 | WP_253703292.1 | signal recognition particle-docking protein FtsY | - |
| E4N90_RS04070 (E4N90_04055) | 853839..854522 | + | 684 | WP_253703293.1 | hypothetical protein | - |
| E4N90_RS04075 (E4N90_04060) | 854524..855804 | + | 1281 | WP_253703295.1 | ABC transporter permease | - |
| E4N90_RS04080 (E4N90_04065) | 855797..856477 | + | 681 | WP_253703298.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| E4N90_RS04085 (E4N90_04070) | 856474..857820 | + | 1347 | WP_253703300.1 | ABC transporter permease | - |
| E4N90_RS04090 (E4N90_04075) | 857817..858314 | + | 498 | WP_002674811.1 | UvrB/UvrC motif-containing protein | - |
| E4N90_RS04095 (E4N90_04080) | 858298..859371 | + | 1074 | WP_253703302.1 | ATP--guanido phosphotransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|