MGE detailed information
MGE type: Conjugative plasmid MGE length: 94776 bp
Accession: NZ_CP058344 Location: 1..94776 Organism: Escherichia coli strain W60 Replicon: plasmid pECW602
Accession: NZ_CP058344 Location: 1..94776 Organism: Escherichia coli strain W60 Replicon: plasmid pECW602
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXP40_RS23550 () | 737..1018 | - | 282 | Protein_1 | P-type conjugative transfer protein TrbJ | - |
| HXP40_RS23555 () | 948..1493 | - | 546 | Protein_2 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HXP40_RS23560 () | 1480..1761 | - | 282 | WP_197219679.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HXP40_RS23565 () | 1877..2620 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HXP40_RS23570 () | 2613..2873 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| HXP40_RS23575 () | 2900..4709 | - | 1810 | Protein_6 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HXP40_RS23580 () | 4706..5345 | - | 640 | Protein_7 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HXP40_RS23585 () | 5354..6346 | - | 993 | WP_053320745.1 | conjugal transfer pilus assembly protein TraU | - |
| HXP40_RS23590 () | 6343..6975 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| HXP40_RS23595 () | 6972..7358 | - | 387 | WP_000099687.1 | type-F conjugative transfer system protein TrbI | - |
| HXP40_RS23600 () | 7355..9982 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| HXP40_RS23605 () | 10142..10363 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| HXP40_RS23610 () | 10498..11013 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HXP40_RS23615 () | 11010..11378 | - | 369 | WP_071787938.1 | conjugal transfer protein TrbD | - |
| HXP40_RS23620 () | 11317..11904 | - | 588 | WP_053320746.1 | conjugal transfer protein TraP | - |
| HXP40_RS23625 () | 11894..13321 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| HXP40_RS23630 () | 13321..14025 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HXP40_RS23635 () | 14036..14602 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HXP40_RS23640 () | 14624..14935 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HXP40_RS23645 () | 14940..15302 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| HXP40_RS23650 () | 15335..15730 | - | 396 | WP_053320748.1 | conjugal transfer relaxosome protein TraY | - |
| HXP40_RS23655 () | 15829..16518 | - | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| HXP40_RS23660 () | 16705..17088 | - | 384 | WP_053320747.1 | relaxosome protein TraM | - |
| HXP40_RS23665 () | 17409..18011 | + | 603 | WP_000243713.1 | transglycosylase SLT domain-containing protein | - |
| HXP40_RS23670 () | 18308..19129 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HXP40_RS23675 () | 19240..19536 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| HXP40_RS23680 () | 19836..20213 | + | 378 | Protein_27 | hypothetical protein | - |
| HXP40_RS23685 () | 20451..20609 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 20653..20877 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20653..20877 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20653..20877 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20653..20877 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| HXP40_RS23690 () | 20689..20868 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| HXP40_RS23695 () | 20889..21608 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| HXP40_RS23700 () | 21605..22039 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HXP40_RS23705 () | 22108..24131 | - | 2024 | Protein_32 | ParB/RepB/Spo0J family partition protein | - |
| HXP40_RS23710 () | 24192..24425 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| HXP40_RS23715 () | 24483..24968 | - | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
| HXP40_RS23720 () | 25118..27019 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| HXP40_RS23725 () | 28520..29083 | - | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| HXP40_RS23730 () | 29130..30491 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HXP40_RS23735 () | 30543..30773 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HXP40_RS23740 () | 31811..32002 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| HXP40_RS23745 () | 31999..32421 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HXP40_RS23750 () | 32468..32770 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| HXP40_RS23755 () | 33311..34087 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| HXP40_RS23760 () | 34138..34572 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HXP40_RS23765 () | 34586..34807 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| HXP40_RS23770 () | 34808..35491 | - | 684 | WP_000085883.1 | DNA methylase | - |
| HXP40_RS23775 () | 35568..35861 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| HXP40_RS23780 () | 36008..36970 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HXP40_RS23785 () | 36973..37323 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| HXP40_RS23790 () | 37446..37727 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| HXP40_RS23795 () | 37855..38089 | - | 235 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HXP40_RS23800 () | 39538..39603 | - | 66 | Protein_51 | IS1 family transposase | - |
| HXP40_RS23805 () | 39669..40373 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HXP40_RS23810 () | 40795..41670 | + | 876 | WP_015387340.1 | class A extended-spectrum beta-lactamase CTX-M-55 | - |
| HXP40_RS23815 () | 41717..42193 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| HXP40_RS23820 () | 42452..43180 | - | 729 | Protein_55 | class A beta-lactamase | - |
| HXP40_RS23825 () | 43234..43938 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HXP40_RS23830 () | 44324..44740 | + | 417 | WP_014839980.1 | fosfomycin resistance glutathione transferase FosA3 | - |
| HXP40_RS23835 () | 44745..45263 | - | 519 | WP_014839979.1 | hypothetical protein | - |
| HXP40_RS23840 () | 45263..46051 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| HXP40_RS23845 () | 46071..46541 | - | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| HXP40_RS23850 () | 46551..47255 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HXP40_RS23855 () | 47305..47541 | - | 237 | Protein_62 | hypothetical protein | - |
| HXP40_RS23860 () | 47562..48356 | - | 795 | WP_000572405.1 | aminoglycoside O-phosphotransferase APH(3')-IIa | - |
| HXP40_RS23865 () | 48385..49815 | - | 1431 | Protein_64 | IS4-like element IS50R family transposase | - |
| HXP40_RS23870 () | 49935..50123 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| HXP40_RS23875 () | 50133..51332 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
| HXP40_RS23880 () | 51510..51743 | + | 234 | WP_197219676.1 | tetracycline resistance protein | - |
| HXP40_RS23885 () | 51710..51898 | - | 189 | Protein_68 | IS91 family transposase | - |
| HXP40_RS23890 () | 52010..52315 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| HXP40_RS23895 () | 52343..53557 | - | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| HXP40_RS23900 () | 53774..54220 | - | 447 | Protein_71 | DUF3363 domain-containing protein | - |
| HXP40_RS23905 () | 54689..56182 | - | 1494 | WP_113415090.1 | IS91-like element ISVsa3 family transposase | - |
| HXP40_RS23910 () | 56226..56615 | - | 390 | WP_000102614.1 | hypothetical protein | - |
| HXP40_RS23915 () | 56833..57273 | + | 441 | WP_005119689.1 | hypothetical protein | - |
| HXP40_RS23920 () | 58018..58167 | - | 150 | WP_001138880.1 | hypothetical protein | - |
| HXP40_RS23925 () | 59356..60171 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HXP40_RS23930 () | 60232..61035 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HXP40_RS23935 () | 61035..61871 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| HXP40_RS23940 () | 61978..62382 | - | 405 | Protein_79 | IS91 family transposase | - |
| HXP40_RS23945 () | 62593..62817 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HXP40_RS23950 () | 62814..63551 | - | 738 | WP_001446887.1 | recombinase family protein | - |
| HXP40_RS23955 () | 64037..64177 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HXP40_RS23960 () | 64183..64887 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HXP40_RS23965 () | 65159..65839 | + | 681 | Protein_84 | class 1 integron integrase IntI1 | - |
| HXP40_RS23970 () | 65904..66608 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HXP40_RS23975 () | 66674..67219 | + | 546 | Protein_86 | Tn3 family transposase | - |
| HXP40_RS23980 () | 67255..67670 | - | 416 | Protein_87 | IS1 family transposase | - |
| HXP40_RS23985 () | 67919..68320 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HXP40_RS23990 () | 68253..68510 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HXP40_RS23995 () | 68603..69256 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HXP40_RS24000 () | 70195..71052 | - | 858 | WP_065800511.1 | incFII family plasmid replication initiator RepA | - |
| HXP40_RS24005 () | 71045..71119 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HXP40_RS24010 () | 71354..71614 | - | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
| HXP40_RS24015 () | 72556..75411 | - | 2856 | WP_053320759.1 | chromosome segregation protein SMC | - |
| HXP40_RS24020 () | 75476..77509 | - | 2034 | WP_000887497.1 | N-6 DNA methylase | - |
| HXP40_RS24025 () | 77555..80104 | - | 2550 | WP_053320758.1 | DEAD/DEAH box helicase family protein | - |
| HXP40_RS24030 () | 80390..80602 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| HXP40_RS24035 () | 80738..81298 | - | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| HXP40_RS24040 () | 81353..82096 | - | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| HXP40_RS24045 () | 82116..87386 | - | 5271 | WP_197219677.1 | conjugative transfer relaxase/helicase TraI | - |
| HXP40_RS24050 () | 87386..89710 | - | 2325 | WP_197219678.1 | type IV conjugative transfer system coupling protein TraD | - |
| HXP40_RS24055 () | 89963..90694 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| HXP40_RS24060 () | 90726..91229 | - | 504 | WP_053320762.1 | surface exclusion protein | - |
| HXP40_RS24065 () | 91244..94066 | - | 2823 | WP_053320755.1 | conjugal transfer mating pair stabilization protein TraG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|