NZ_CP0583111..217263

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 217263 bp
Accession: NZ_CP058311        Location: 1..217263         Organism: Escherichia coli strain AMSCJX04       Replicon: plasmid pAMPD03


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HXS78_RS24490 () 745..972 + 228 WP_000276410.1 hypothetical protein -
HXS78_RS24495 () 1152..1470 + 319 Protein_2 hypothetical protein -
HXS78_RS24500 () 1985..2292 + 308 Protein_3 hypothetical protein -
HXS78_RS24505 () 2297..2786 + 490 Protein_4 DUF3085 domain-containing protein -
HXS78_RS24510 () 3597..3821 + 225 WP_000551490.1 hypothetical protein -
HXS78_RS24515 () 3861..4061 + 201 WP_000814954.1 hypothetical protein -
HXS78_RS24520 () 4282..4593 + 312 WP_001424621.1 hypothetical protein -
HXS78_RS24525 () 4968..5249 + 282 WP_000703843.1 hypothetical protein -
HXS78_RS24530 () 5465..6070 + 606 WP_000137793.1 hypothetical protein -
HXS78_RS24535 () 6403..7772 + 1370 WP_087522250.1 IS3 family transposase IS150 Transposase
HXS78_RS24540 () 7871..8029 + 159 WP_000783758.1 type I toxin-antitoxin system Hok family toxin -
HXS78_RS24545 () 8448..8651 - 204 WP_001015182.1 hypothetical protein -
HXS78_RS24550 () 8697..9047 - 351 WP_000743060.1 hypothetical protein -
HXS78_RS24555 () 9107..9706 - 600 WP_001031421.1 hypothetical protein -
HXS78_RS24560 () 9806..10750 - 945 WP_000778030.1 DUF5417 domain-containing protein -
HXS78_RS24565 () 11260..11436 + 177 WP_001371930.1 hypothetical protein -
HXS78_RS24570 () 11852..13036 + 1185 WP_001272970.1 hypothetical protein -
HXS78_RS24575 () 13102..13383 + 282 WP_000710431.1 hypothetical protein -
HXS78_RS24580 () 13640..13846 + 207 WP_000893963.1 hypothetical protein -
HXS78_RS24585 () 13967..14263 + 297 WP_000744346.1 hypothetical protein -
HXS78_RS24590 () 14308..14745 + 438 WP_000286107.1 hypothetical protein -
HXS78_RS24595 () 14813..15349 + 537 WP_000800252.1 hypothetical protein -
HXS78_RS24600 () 15514..15882 + 369 WP_000537761.1 hypothetical protein -
HXS78_RS24605 () 16315..16623 + 309 WP_063856159.1 hypothetical protein -
HXS78_RS24610 () 16980..17264 + 285 WP_001032029.1 hypothetical protein -
HXS78_RS24615 () 17330..17683 + 354 WP_000210769.1 hypothetical protein -
HXS78_RS24620 () 17970..18701 - 732 WP_000338612.1 NERD domain-containing protein -
HXS78_RS24625 () 18703..19884 - 1182 WP_000952983.1 S49 family peptidase -
HXS78_RS24630 () 19895..20557 - 663 WP_000718549.1 DUF4400 domain-containing protein -
HXS78_RS24635 () 20544..21653 - 1110 WP_000343599.1 hypothetical protein -
HXS78_RS24640 () 21653..23737 - 2085 WP_001284076.1 conjugative transfer system coupling protein TraD -
HXS78_RS24645 () 23737..26883 - 3147 WP_001011151.1 hypothetical protein Relaxase
HXS78_RS24650 () 26893..27630 - 738 WP_000128631.1 hypothetical protein -
HXS78_RS24655 () 27627..28112 - 486 WP_000071885.1 hypothetical protein -
HXS78_RS24660 () 28871..29671 + 801 WP_000004209.1 hypothetical protein -
HXS78_RS24665 () 29673..30185 + 513 WP_001140953.1 hypothetical protein -
HXS78_RS24670 () 30779..31825 + 1047 WP_000196728.1 thioredoxin family protein -
HXS78_RS24675 () 31815..33230 + 1416 WP_001257292.1 IncHI-type conjugal transfer protein TrhH -
HXS78_RS24680 () 33239..37192 + 3954 WP_000386159.1 conjugal transfer protein TraG N-terminal domain-containing protein -
HXS78_RS24685 () 37373..38662 + 1290 WP_001284752.1 HNH endonuclease -
HXS78_RS24690 () 38770..38985 - 216 Protein_41 hypothetical protein -
HXS78_RS24695 () 38993..39964 - 972 WP_170936220.1 IS30 family transposase ISApl1 Transposase
HXS78_RS24700 () 40057..40779 - 723 WP_039003037.1 PAP2 family protein -
HXS78_RS24705 () 40851..42476 - 1626 WP_049589868.1 putative phosphatidylethanolamine transferase Mcr-1 VF
HXS78_RS24710 () 42672..43643 - 972 WP_170386723.1 IS30 family transposase ISApl1 Transposase
HXS78_RS24715 () 43734..44039 - 306 Protein_46 hypothetical protein -
HXS78_RS24720 () 44170..44709 - 540 WP_000494967.1 hypothetical protein VF
HXS78_RS24725 () 44857..45606 + 750 WP_000720274.1 thioredoxin fold domain-containing protein -
HXS78_RS24730 () 45631..46023 + 393 WP_000843244.1 hypothetical protein -
HXS78_RS24735 () 46057..46479 + 423 WP_000025803.1 hypothetical protein -
HXS78_RS24740 () 46539..47150 - 612 WP_000620990.1 hypothetical protein -
HXS78_RS24745 () 47257..48066 + 810 WP_000031377.1 DsbA family protein -
HXS78_RS24750 () 48112..49371 - 1260 WP_042634445.1 translesion error-prone DNA polymerase V subunit UmuC -
HXS78_RS24755 () 49355..49789 - 435 WP_000111290.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HXS78_RS24760 () 49983..50600 + 618 WP_001130842.1 hypothetical protein -
HXS78_RS24765 () 50750..51106 + 357 WP_000770127.1 hypothetical protein -
HXS78_RS24770 () 51357..51527 + 171 WP_152919720.1 hypothetical protein -
HXS78_RS24775 () 51564..51830 + 267 Protein_58 IS6 family transposase IS15DII Transposase
HXS78_RS24780 () 51933..53105 + 1173 WP_000952373.1 IS21 family transposase IS21 Transposase
HXS78_RS24785 () 53105..53902 + 798 WP_000544830.1 IS21 family transposase IS21 Transposase
HXS78_RS24790 () 53962..54402 + 441 Protein_61 IS6-like element IS26 family transposase -
HXS78_RS24795 () 54432..55136 + 705 WP_032193599.1 replication initiation protein -
HXS78_RS24800 () 55952..57388 - 1437 WP_000105383.1 glutathione synthase -
HXS78_RS24805 () 57655..58359 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
HXS78_RS24810 () 58457..59470 - 1014 WP_177754147.1 class 1 integron integrase IntI1 -
HXS78_RS24815 () 59647..60201 + 555 WP_032488579.1 aminoglycoside N-acetyltransferase AAC(6')-Ib3 -
HXS78_RS24820 () 60429..61169 - 741 WP_012695455.1 IS21 family transposase ISCfr8 Transposase
HXS78_RS24825 () 61156..62664 - 1509 WP_077249983.1 IS21 family transposase ISCfr8 Transposase
HXS78_RS24830 () 62824..63528 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
HXS78_RS24835 () 63730..64518 - 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
HXS78_RS24840 () 64649..65122 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
HXS78_RS24845 () 65280..66293 + 1014 WP_000845048.1 class 1 integron integrase IntI1 -
HXS78_RS24850 () 66775..67479 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
HXS78_RS24855 () 67581..68060 + 480 WP_000888203.1 Rrf2 family transcriptional regulator -
HXS78_RS24860 () 68130..71282 - 3153 WP_000347934.1 Efflux pump membrane transporter BepE VF
HXS78_RS24865 () 71306..72481 - 1176 WP_063865358.1 Efflux pump periplasmic linker BepF VF
HXS78_RS24870 () 72801..73505 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
HXS78_RS24875 () 73840..74232 + 393 WP_000084745.1 pyridoxamine 5'-phosphate oxidase family protein -
HXS78_RS24880 () 74552..74938 - 387 WP_063102497.1 bleomycin binding protein -
HXS78_RS24885 () 75132..75835 - 704 Protein_80 IS6 family transposase -
HXS78_RS24890 () 75903..77201 + 1299 Protein_81 Tn3 family transposase TnpA_Tn3 Transposase
HXS78_RS24895 () 77235..77951 + 717 Protein_82 Tn3 family transposase -
HXS78_RS24900 () 78061..78411 + 351 WP_031613424.1 hypothetical protein -
HXS78_RS24905 () 78788..79105 + 318 WP_029698059.1 hypothetical protein -
HXS78_RS24910 () 79156..79563 - 408 WP_000074418.1 hypothetical protein -
HXS78_RS24915 () 79593..79871 - 279 WP_095858631.1 hypothetical protein -
HXS78_RS24920 () 80391..80621 - 231 WP_001572393.1 hypothetical protein -
HXS78_RS24925 () 81283..81516 - 234 WP_015059496.1 hypothetical protein -
HXS78_RS24930 () 81738..82634 - 897 WP_000975182.1 hypothetical protein -
HXS78_RS24935 () 82637..83152 - 516 WP_001572389.1 thermonuclease family protein -
HXS78_RS24940 () 83367..84794 + 1428 WP_000833382.1 DNA cytosine methyltransferase -
HXS78_RS24945 () 84855..85022 + 168 WP_000220758.1 hypothetical protein -
HXS78_RS24950 () 85045..86364 + 1320 WP_000078514.1 DUF1173 family protein -
HXS78_RS24955 () 86644..87849 - 1206 WP_001572381.1 hypothetical protein -
HXS78_RS24960 () 87846..88664 - 819 WP_000193209.1 DUF4942 domain-containing protein -
HXS78_RS24965 () 89307..89687 + 381 WP_001426317.1 hypothetical protein -
HXS78_RS24970 () 89745..90410 + 666 WP_000490638.1 hypothetical protein -
HXS78_RS24975 () 90454..91151 - 698 Protein_98 IS1 family transposase -
HXS78_RS24980 () 91435..92250 - 816 WP_053276223.1 HNH endonuclease -
HXS78_RS24985 () 92263..92673 - 411 WP_000985911.1 hypothetical protein -
HXS78_RS24990 () 92775..92981 - 207 WP_000134171.1 hypothetical protein -
HXS78_RS24995 () 93042..94367 - 1326 WP_095858479.1 type II toxin-antitoxin system HipA family toxin Toxin Detail
HXS78_RS25000 () 94372..94665 - 294 WP_024136327.1 helix-turn-helix transcriptional regulator Antitoxin Detail
HXS78_RS25005 () 95269..95661 - 393 WP_000341066.1 hypothetical protein -
HXS78_RS25010 () 96034..96375 + 342 WP_001151575.1 hypothetical protein -
HXS78_RS25015 () 96467..96658 + 192 WP_000398480.1 hypothetical protein -
HXS78_RS25020 () 96708..96989 + 282 WP_000077926.1 hypothetical protein -
HXS78_RS25025 () 97552..98793 - 1242 WP_001053338.1 VWA domain-containing protein -
HXS78_RS25030 () 99222..99797 - 576 WP_000301242.1 TerD family protein -
HXS78_RS25035 () 99865..100443 - 579 WP_000116677.1 tellurium resistance membrane protein TerD -
HXS78_RS25040 () 100492..101532 - 1041 WP_000255079.1 tellurium resistance membrane protein TerC -
HXS78_RS25045 () 101555..102010 - 456 WP_000007448.1 tellurite resistance TerB family protein -
HXS78_RS25050 () 102033..103190 - 1158 WP_001054787.1 TerD family protein -
HXS78_RS25055 () 103190..103771 - 582 WP_042634303.1 tellurium resistance TerZ family protein -
HXS78_RS25060 () 104095..105153 + 1059 WP_001035162.1 ATP-grasp domain-containing protein -
HXS78_RS25065 () 105163..106305 + 1143 WP_001285478.1 phosphoribosyltransferase domain-containing protein -
HXS78_RS25070 () 106298..107071 + 774 WP_001040059.1 hypothetical protein -
HXS78_RS25075 () 107073..108152 + 1080 WP_042634304.1 cysteine protease StiP family protein -
HXS78_RS25080 () 108152..109108 + 957 WP_000797366.1 HpcH/HpaI aldolase/citrate lyase family protein -
HXS78_RS25085 () 109119..110327 + 1209 WP_000506887.1 DUF4236 domain-containing protein -
HXS78_RS25090 () 110345..110812 + 468 WP_001176767.1 tellurium resistance protein TerW -
HXS78_RS25095 () 111275..111913 + 639 WP_001388628.1 VWA domain-containing protein -
HXS78_RS25100 () 111936..112577 + 642 WP_000116681.1 TerD family protein -
HXS78_RS25105 () 112577..113215 + 639 WP_001253658.1 VWA domain-containing protein -
HXS78_RS25110 () 113301..114341 + 1041 WP_001253653.1 VWA domain-containing protein -
HXS78_RS25115 () 114341..115978 + 1638 WP_000081622.1 protein phosphatase 2C domain-containing protein -
HXS78_RS25120 () 116004..117503 + 1500 WP_001284313.1 kinase -
HXS78_RS25125 () 117670..118752 - 1083 WP_001232449.1 hypothetical protein -
HXS78_RS25130 () 119113..119325 - 213 WP_001285422.1 hypothetical protein -
HXS78_RS25135 () 119496..120671 + 1176 WP_000795947.1 tyrosine-type recombinase/integrase -
HXS78_RS25140 () 120693..121037 - 345 WP_001805195.1 hypothetical protein -
HXS78_RS25145 () 120973..121878 - 906 WP_001198594.1 hypothetical protein -
HXS78_RS25150 () 121888..122850 - 963 WP_000119427.1 DNA replication protein -
HXS78_RS25155 () 122941..123324 - 384 WP_001424628.1 hypothetical protein -
HXS78_RS25160 () 123404..123940 - 537 WP_000107168.1 hypothetical protein -
HXS78_RS25165 () 124014..124271 - 258 WP_001371933.1 hypothetical protein -
HXS78_RS25170 () 124279..124869 - 591 WP_000578892.1 hypothetical protein -
HXS78_RS25175 () 124914..125189 - 276 WP_001004201.1 hypothetical protein -
HXS78_RS25180 () 125453..126409 - 957 WP_046788424.1 hypothetical protein -
HXS78_RS25185 () 126581..127519 - 939 WP_000472043.1 hypothetical protein -
HXS78_RS25190 () 127586..128506 - 921 WP_000991699.1 hypothetical protein -
HXS78_RS25195 () 128575..129510 - 936 WP_000691118.1 hypothetical protein -
HXS78_RS25200 () 129581..130459 - 879 WP_000762004.1 hypothetical protein -
HXS78_RS25205 () 130538..131059 - 522 WP_001010933.1 hypothetical protein -
HXS78_RS25210 () 131330..132562 - 1233 WP_000220381.1 toprim domain-containing protein -
HXS78_RS25215 () 132676..132897 - 222 WP_042634307.1 hypothetical protein -
HXS78_RS25220 () 132969..134981 - 2013 WP_046788423.1 VWA domain-containing protein -
HXS78_RS25225 () 135059..136186 - 1128 WP_000174395.1 DUF3150 domain-containing protein -
HXS78_RS25230 () 136250..136423 - 174 WP_001176647.1 hypothetical protein -
HXS78_RS25235 () 136555..137613 - 1059 WP_000063335.1 AAA family ATPase -
HXS78_RS25240 () 137671..138648 - 978 WP_042634278.1 hypothetical protein -
HXS78_RS25245 () 138709..139086 - 378 WP_000120822.1 hypothetical protein -
HXS78_RS25250 () 139144..140016 - 873 WP_000041927.1 hypothetical protein -
HXS78_RS25255 () 140411..142195 - 1785 WP_042634277.1 IncHI-type conjugal transfer helicase TrhI -
HXS78_RS25260 () 142375..143247 + 873 WP_000771832.1 hypothetical protein -
HXS78_RS25265 () 143276..146464 - 3189 WP_000776705.1 IncHI-type conjugal transfer protein TrhN -
HXS78_RS25270 () 146483..147541 - 1059 WP_001572423.1 IncHI-type conjugal transfer protein TrhU -
HXS78_RS25275 () 147683..149194 - 1512 WP_001256133.1 hypothetical protein -
HXS78_RS25280 () 149181..149693 - 513 WP_001286759.1 IncHI-type conjugal transfer protein TrhF -
HXS78_RS25285 () 149971..154275 - 4305 WP_001232107.1 IncHI-type conjugal transfer protein RSP -
HXS78_RS25290 () 154395..154949 - 555 WP_000235777.1 hypothetical protein -
HXS78_RS25295 () 154958..155383 - 426 WP_000836980.1 hypothetical protein -
HXS78_RS25300 () 155373..155825 - 453 WP_000952689.1 hypothetical protein -
HXS78_RS25305 () 156229..156867 - 639 WP_001107537.1 hypothetical protein -
HXS78_RS25310 () 156879..157916 - 1038 WP_000818955.1 hypothetical protein -
HXS78_RS25315 () 158280..159227 + 948 WP_000718594.1 metallophosphoesterase -
HXS78_RS25320 () 159224..160060 + 837 WP_042634275.1 hypothetical protein -
HXS78_RS25325 () 160053..160574 + 522 WP_000598516.1 hypothetical protein -
HXS78_RS25330 () 160571..160960 + 390 WP_001572421.1 hypothetical protein -
HXS78_RS25335 () 161022..162026 - 1005 WP_032192066.1 ParB N-terminal domain-containing protein -
HXS78_RS25340 () 162023..163276 - 1254 WP_032084678.1 Plasmid partition protein A VF
HXS78_RS25345 () 167113..169794 - 2682 WP_063101809.1 TraC family protein -
HXS78_RS25350 () 169803..170753 - 951 WP_001022587.1 IncHI-type conjugal transfer lipoprotein TrhV -
HXS78_RS25355 () 170763..171578 - 816 WP_001639798.1 protein-disulfide isomerase HtdT -
HXS78_RS25360 () 171634..172056 - 423 WP_000251250.1 hypothetical protein -
HXS78_RS25365 () 172124..173479 - 1356 WP_000351841.1 IncHI-type conjugal transfer protein TrhB -
HXS78_RS25370 () 173469..173930 - 462 WP_000521240.1 hypothetical protein -
HXS78_RS25375 () 173932..175203 - 1272 WP_000592090.1 type-F conjugative transfer system secretin TraK -
HXS78_RS25380 () 175203..175991 - 789 WP_000783153.1 pilus assembly protein -
HXS78_RS25385 () 176003..176320 - 318 WP_000043357.1 hypothetical protein -
HXS78_RS25390 () 176371..176724 - 354 WP_000423602.1 hypothetical protein -
HXS78_RS25395 () 177873..178748 - 876 WP_000594612.1 RepB family plasmid replication initiator protein -
HXS78_RS25400 () 179225..180280 + 1056 WP_001065779.1 hypothetical protein -
HXS78_RS25405 () 180298..180498 + 201 WP_000594931.1 hypothetical protein -
HXS78_RS25410 () 180495..181211 + 717 WP_000838218.1 zinc finger-like domain-containing protein -
HXS78_RS25415 () 181446..182300 + 855 WP_000970403.1 hypothetical protein -
HXS78_RS25420 () 182309..183121 - 813 WP_001121575.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
HXS78_RS25425 () 183491..184654 + 1164 WP_000114859.1 hypothetical protein -
HXS78_RS25430 () 184902..186593 + 1692 WP_042634269.1 DUF4942 domain-containing protein -
HXS78_RS25435 () 186590..186766 + 177 WP_000070863.1 hypothetical protein -
HXS78_RS25440 () 186815..187276 + 462 WP_000502497.1 hypothetical protein -
HXS78_RS25445 () 187257..187538 + 282 WP_000535422.1 hypothetical protein -
HXS78_RS25450 () 187596..188222 - 627 WP_000966519.1 hypothetical protein -
HXS78_RS25455 () 188595..191051 + 2457 WP_001572417.1 DUF4165 domain-containing protein -
HXS78_RS25460 () 192159..193247 + 1089 WP_000159529.1 IncHI-type plasmid replication initiator protein RepHI2 -
HXS78_RS25465 () 195165..197585 - 2421 WP_000681217.1 DUF4165 domain-containing protein -
HXS78_RS25470 () 198050..198637 - 588 WP_000491822.1 hypothetical protein -
HXS78_RS25475 () 198682..198945 - 264 WP_000149861.1 hypothetical protein -
HXS78_RS25480 () 199039..199800 - 762 WP_001167416.1 methyltransferase -
HXS78_RS25485 () 199881..200645 - 765 WP_000277497.1 hypothetical protein -
HXS78_RS25490 () 200966..201133 + 168 WP_000803860.1 hypothetical protein -
HXS78_RS25495 () 201206..203596 + 2391 WP_000694550.1 Ig-like domain repeat protein -
HXS78_RS25500 () 204031..204501 + 471 WP_000170638.1 hypothetical protein -
HXS78_RS25505 () 204551..204847 + 297 WP_000581857.1 type II toxin-antitoxin system RelE/ParE family toxin -
HXS78_RS25510 () 204856..206037 + 1182 WP_001424497.1 flavin reductase family protein -
HXS78_RS25515 () 206445..206822 + 378 WP_000853477.1 hypothetical protein -
HXS78_RS25520 () 206917..207345 + 429 WP_001133498.1 hypothetical protein -
HXS78_RS25525 () 207410..207667 + 258 WP_001290637.1 hypothetical protein -
HXS78_RS25530 () 207823..208431 + 609 WP_000833773.1 hypothetical protein -
HXS78_RS25535 () 208600..209850 + 1251 WP_000104323.1 site-specific DNA-methyltransferase -
HXS78_RS25540 () 210131..210277 + 147 WP_001426334.1 hypothetical protein -
HXS78_RS25545 () 210693..211019 + 327 WP_000556022.1 hypothetical protein -
HXS78_RS25550 () 211085..211342 + 258 WP_042634392.1 hypothetical protein -
HXS78_RS25555 () 211569..212360 + 792 WP_000774870.1 hypothetical protein -
HXS78_RS25560 () 213033..215417 + 2385 WP_000469466.1 phosphoadenosine phosphosulfate reductase family protein -
HXS78_RS25565 () 215667..215906 + 240 WP_001180999.1 hypothetical protein -
HXS78_RS25570 () 215969..216280 + 312 WP_000172889.1 hypothetical protein -
HXS78_RS25575 () 216277..216465 + 189 WP_000159618.1 hypothetical protein -
HXS78_RS25580 () 216526..217059 + 534 WP_000241454.1 HNH endonuclease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance