MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109907 bp
Accession: NZ_CP058309 Location: 1..109907 Organism: Escherichia coli strain AMSCJX04 Replicon: plasmid pAMPD01
Accession: NZ_CP058309 Location: 1..109907 Organism: Escherichia coli strain AMSCJX04 Replicon: plasmid pAMPD01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS78_RS23215 () | 180..936 | + | 757 | Protein_2 | hypothetical protein | - |
| HXS78_RS23220 () | 1251..1445 | + | 195 | Protein_3 | DNA polymerase III subunit theta | - |
| HXS78_RS23225 () | 1527..1877 | + | 351 | WP_063502072.1 | hypothetical protein | - |
| HXS78_RS23230 () | 1976..2365 | + | 390 | WP_177754122.1 | DNA repair protein | - |
| HXS78_RS23235 () | 2403..3467 | - | 1065 | WP_001404346.1 | iron-sulfur cluster carrier protein ApbC | - |
| HXS78_RS23240 () | 3657..5690 | + | 2034 | Protein_7 | methionine--tRNA ligase | - |
| HXS78_RS23245 () | 5927..6147 | + | 221 | Protein_8 | hypothetical protein | - |
| HXS78_RS23250 () | 6184..6370 | + | 187 | Protein_9 | hypothetical protein | - |
| HXS78_RS23255 () | 6532..6978 | + | 447 | WP_177754123.1 | hypothetical protein | - |
| HXS78_RS23260 () | 8682..8882 | + | 201 | Protein_11 | hypothetical protein | - |
| HXS78_RS23265 () | 9034..9362 | + | 329 | Protein_12 | hypothetical protein | - |
| HXS78_RS23270 () | 9517..9828 | + | 312 | WP_001755488.1 | hypothetical protein | - |
| HXS78_RS23275 () | 9956..10351 | + | 396 | WP_000216800.1 | hypothetical protein | - |
| HXS78_RS23280 () | 10469..10843 | + | 375 | WP_001755487.1 | hypothetical protein | - |
| HXS78_RS23285 () | 11179..11460 | + | 282 | WP_000129290.1 | hypothetical protein | - |
| HXS78_RS23290 () | 11665..12147 | + | 483 | WP_001009193.1 | hypothetical protein | - |
| HXS78_RS23295 () | 12766..12996 | - | 231 | WP_001755486.1 | hypothetical protein | - |
| HXS78_RS23300 () | 13017..13220 | - | 204 | WP_000255469.1 | hypothetical protein | - |
| HXS78_RS23305 () | 13269..13919 | - | 651 | WP_032252750.1 | hypothetical protein | - |
| HXS78_RS23310 () | 14203..14511 | - | 309 | WP_171821072.1 | hypothetical protein | - |
| HXS78_RS23315 () | 14515..15039 | - | 525 | WP_094276151.1 | transcriptional regulator | - |
| HXS78_RS23320 () | 15044..15301 | - | 258 | WP_167818176.1 | hypothetical protein | - |
| HXS78_RS23325 () | 15491..16033 | - | 543 | WP_021533326.1 | hypothetical protein | - |
| HXS78_RS23330 () | 16288..16566 | - | 279 | WP_021520518.1 | hypothetical protein | - |
| HXS78_RS23335 () | 16569..18128 | - | 1560 | WP_172693121.1 | DEAD/DEAH box helicase | - |
| HXS78_RS23340 () | 18211..18891 | + | 681 | WP_000382660.1 | ParB N-terminal domain-containing protein | - |
| HXS78_RS23345 () | 18891..19559 | + | 669 | WP_000161986.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HXS78_RS23350 () | 19556..20221 | + | 666 | WP_001717191.1 | ATP-binding cassette domain-containing protein | - |
| HXS78_RS23355 () | 20218..21108 | + | 891 | WP_000129633.1 | hypothetical protein | - |
| HXS78_RS23360 () | 21118..21384 | + | 267 | WP_000176292.1 | hypothetical protein | - |
| HXS78_RS23365 () | 21580..22212 | + | 633 | WP_000215413.1 | hypothetical protein | - |
| HXS78_RS23370 () | 22212..23468 | + | 1257 | WP_001007299.1 | phage terminase large subunit | - |
| HXS78_RS23375 () | 23495..25069 | + | 1575 | WP_000422361.1 | phage portal protein | - |
| HXS78_RS23380 () | 25091..25978 | + | 888 | WP_033803024.1 | hypothetical protein | - |
| HXS78_RS23385 () | 26004..26879 | + | 876 | WP_001130339.1 | hypothetical protein | - |
| HXS78_RS23390 () | 26953..27873 | + | 921 | WP_001308872.1 | Ig domain-containing protein | - |
| HXS78_RS23395 () | 27918..28352 | + | 435 | WP_000801187.1 | hypothetical protein | - |
| HXS78_RS23400 () | 28352..29185 | + | 834 | WP_000057118.1 | hypothetical protein | - |
| HXS78_RS23405 () | 29265..29609 | + | 345 | WP_001027663.1 | hypothetical protein | - |
| HXS78_RS23410 () | 29600..30073 | + | 474 | WP_000523628.1 | hypothetical protein | - |
| HXS78_RS23415 () | 30075..30458 | + | 384 | WP_021512326.1 | minor capsid protein | - |
| HXS78_RS23420 () | 30533..31279 | + | 747 | WP_000072377.1 | Ig domain-containing protein | - |
| HXS78_RS23425 () | 31335..31652 | + | 318 | WP_000163861.1 | hypothetical protein | - |
| HXS78_RS23430 () | 31778..32002 | + | 225 | WP_000952686.1 | hypothetical protein | - |
| HXS78_RS23435 () | 32010..36581 | + | 4572 | WP_177754125.1 | tape measure protein | - |
| HXS78_RS23440 () | 36624..36959 | + | 336 | WP_000442112.1 | phage tail protein | - |
| HXS78_RS23445 () | 37042..37740 | + | 699 | WP_000511445.1 | phage minor tail protein L | - |
| HXS78_RS23450 () | 37733..38530 | + | 798 | WP_000526939.1 | C40 family peptidase | - |
| HXS78_RS23455 () | 38518..39111 | + | 594 | WP_001293195.1 | tail assembly protein | - |
| HXS78_RS23460 () | 39130..43857 | + | 4728 | WP_097446432.1 | DUF1983 domain-containing protein | - |
| HXS78_RS23465 () | 44493..45176 | - | 684 | WP_024269791.1 | hypothetical protein | - |
| HXS78_RS23470 () | 46306..48048 | + | 1743 | Protein_53 | phage tail protein | - |
| HXS78_RS23475 () | 48251..48574 | + | 324 | WP_001717323.1 | hypothetical protein | - |
| HXS78_RS23480 () | 48588..49280 | + | 693 | WP_000856757.1 | hypothetical protein | - |
| HXS78_RS23485 () | 49282..49533 | + | 252 | WP_000901559.1 | hypothetical protein | - |
| HXS78_RS23490 () | 49702..50223 | - | 522 | WP_000072677.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HXS78_RS23495 () | 50231..50500 | - | 270 | WP_001351987.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HXS78_RS23500 () | 50819..51487 | + | 669 | WP_000161228.1 | AAA family ATPase | - |
| HXS78_RS23505 () | 51493..51846 | + | 354 | WP_160378290.1 | hypothetical protein | - |
| HXS78_RS23510 () | 51899..52666 | - | 768 | WP_000342417.1 | hypothetical protein | - |
| HXS78_RS23515 () | 52949..53689 | + | 741 | WP_177754127.1 | hypothetical protein | - |
| HXS78_RS23520 () | 53733..55073 | + | 1341 | WP_000137333.1 | AAA family ATPase | - |
| HXS78_RS23525 () | 55221..56336 | + | 1116 | WP_064759150.1 | DNA primase | - |
| HXS78_RS23530 () | 56412..57194 | + | 783 | WP_063116780.1 | hypothetical protein | - |
| HXS78_RS23535 () | 57475..57732 | + | 258 | WP_000989357.1 | hypothetical protein | - |
| HXS78_RS23540 () | 57729..59051 | + | 1323 | WP_012640724.1 | DNA ligase | - |
| HXS78_RS23545 () | 59409..59699 | + | 291 | WP_000067985.1 | hypothetical protein | - |
| HXS78_RS23565 () | 61126..62424 | - | 1299 | WP_021533200.1 | hypothetical protein | - |
| HXS78_RS23570 () | 62603..62848 | + | 246 | WP_021533199.1 | GrxA family glutaredoxin | - |
| HXS78_RS23575 () | 63060..64163 | + | 1104 | WP_024187531.1 | site-specific integrase | - |
| HXS78_RS23580 () | 64158..64544 | - | 387 | WP_001282576.1 | transcriptional regulator | - |
| HXS78_RS23585 () | 64796..65008 | + | 213 | WP_012640719.1 | hypothetical protein | - |
| HXS78_RS23590 () | 65107..67215 | + | 2109 | WP_021533197.1 | hypothetical protein | - |
| HXS78_RS23595 () | 67311..68546 | + | 1236 | WP_001717302.1 | AAA family ATPase | - |
| HXS78_RS23600 () | 68727..72233 | + | 3507 | WP_177754129.1 | DNA polymerase III subunit alpha | - |
| HXS78_RS23605 () | 72537..72752 | - | 216 | WP_000066497.1 | cold shock protein CspG | - |
| HXS78_RS23610 () | 73082..73645 | - | 564 | WP_001240351.1 | hypothetical protein | - |
| HXS78_RS23615 () | 74185..74616 | + | 432 | WP_001090697.1 | hypothetical protein | - |
| HXS78_RS23620 () | 74734..75762 | + | 1029 | WP_021533195.1 | hypothetical protein | - |
| HXS78_RS23625 () | 75823..76767 | + | 945 | WP_021533194.1 | hypothetical protein | - |
| HXS78_RS23630 () | 76767..77033 | + | 267 | WP_021533193.1 | hypothetical protein | - |
| HXS78_RS23635 () | 77036..79375 | + | 2340 | WP_021533192.1 | hint domain-containing protein | - |
| HXS78_RS23640 () | 79468..79668 | + | 201 | WP_021533191.1 | hypothetical protein | - |
| HXS78_RS23645 () | 79672..80502 | + | 831 | WP_000715581.1 | SPFH/Band 7/PHB domain protein | - |
| HXS78_RS23650 () | 80594..81019 | + | 426 | WP_021533190.1 | hypothetical protein | - |
| HXS78_RS23655 () | 81075..81350 | + | 276 | WP_001265407.1 | hypothetical protein | - |
| HXS78_RS23660 () | 81566..81901 | + | 336 | WP_021533189.1 | hypothetical protein | - |
| HXS78_RS23665 () | 81901..82113 | + | 213 | WP_001229345.1 | hypothetical protein | - |
| HXS78_RS23670 () | 82602..83657 | - | 1056 | WP_001293471.1 | replication protein RepA | - |
| HXS78_RS23675 () | 84401..85045 | + | 645 | WP_021533188.1 | hypothetical protein | - |
| HXS78_RS23680 () | 85594..86097 | - | 504 | WP_021533186.1 | hypothetical protein | - |
| HXS78_RS23685 () | 86324..87409 | + | 1086 | WP_000174803.1 | metallophosphoesterase | - |
| HXS78_RS23690 () | 87639..89555 | + | 1917 | WP_021520140.1 | AAA family ATPase | - |
| HXS78_RS23695 () | 89545..90288 | + | 744 | WP_072667174.1 | hypothetical protein | - |
| HXS78_RS23700 () | 90298..90867 | + | 570 | WP_000037962.1 | hypothetical protein | - |
| HXS78_RS23705 () | 90941..93256 | + | 2316 | WP_000623683.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| HXS78_RS23710 () | 93363..94505 | + | 1143 | WP_000122502.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| HXS78_RS23715 () | 94583..95452 | + | 870 | WP_001011861.1 | hypothetical protein | - |
| HXS78_RS23720 () | 95624..96727 | + | 1104 | WP_024175984.1 | thymidylate synthase | - |
| HXS78_RS23725 () | 96741..97142 | + | 402 | WP_000289389.1 | hypothetical protein | - |
| HXS78_RS23730 () | 97139..97615 | + | 477 | WP_000781810.1 | dihydrofolate reductase | - |
| HXS78_RS23735 () | 97615..98259 | + | 645 | WP_000386469.1 | AAA family ATPase | - |
| HXS78_RS23740 () | 98321..98740 | + | 420 | WP_001718079.1 | hypothetical protein | - |
| HXS78_RS23745 () | 98750..99307 | + | 558 | WP_063502066.1 | 3'-5' exonuclease | - |
| HXS78_RS23750 () | 99466..100275 | + | 810 | WP_053902537.1 | hypothetical protein | - |
| HXS78_RS23755 () | 100459..101052 | + | 594 | WP_000559568.1 | phage N-6-adenine-methyltransferase | - |
| HXS78_RS23760 () | 101238..101468 | + | 231 | WP_032203380.1 | hypothetical protein | - |
| HXS78_RS23765 () | 101999..102649 | + | 651 | WP_162739250.1 | ribonuclease HI | - |
| HXS78_RS23770 () | 102795..103289 | + | 495 | WP_021533181.1 | hypothetical protein | - |
| HXS78_RS23775 () | 103299..103496 | + | 198 | WP_021533180.1 | hypothetical protein | - |
| HXS78_RS23780 () | 103590..104015 | + | 426 | WP_021533179.1 | tellurite resistance TerB family protein | - |
| HXS78_RS23785 () | 104015..104173 | + | 159 | WP_014962273.1 | DUF3927 family protein | - |
| HXS78_RS23790 () | 104313..104882 | + | 570 | WP_063502067.1 | hypothetical protein | - |
| HXS78_RS23795 () | 104938..105219 | + | 282 | WP_021533177.1 | hypothetical protein | - |
| HXS78_RS23800 () | 105222..105836 | + | 615 | WP_063502068.1 | hypothetical protein | - |
| HXS78_RS23805 () | 105940..107625 | + | 1686 | WP_001090447.1 | DUF4942 domain-containing protein | - |
| HXS78_RS23810 () | 107686..108390 | + | 705 | WP_063502069.1 | hypothetical protein | - |
| HXS78_RS23815 () | 108390..108770 | + | 381 | WP_053271998.1 | hypothetical protein | - |
| HXS78_RS23820 () | 108909..109364 | + | 456 | WP_053271999.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|