MGE detailed information
MGE type: Genomic_island MGE length: 67159 bp
Accession: NZ_CP058308 Location: 788966..856124 Organism: Escherichia coli strain AMSCJX04 Replicon: chromosome
Accession: NZ_CP058308 Location: 788966..856124 Organism: Escherichia coli strain AMSCJX04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS78_RS03750 () | 784008..784571 | + | 564 | WP_001115139.1 | type II secretion system minor pseudopilin GspH | - |
| HXS78_RS03755 () | 784568..784939 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| HXS78_RS03760 () | 784936..785541 | + | 606 | WP_001255030.1 | type II secretion system minor pseudopilin GspJ | - |
| HXS78_RS03765 () | 785538..786515 | + | 978 | WP_000633239.1 | type II secretion system minor pseudopilin GspK | - |
| HXS78_RS03770 () | 786512..787690 | + | 1179 | WP_000094989.1 | type II secretion system protein GspL | - |
| HXS78_RS03775 () | 787692..788228 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| HXS78_RS03780 () | 788643..788969 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HXS78_RS03785 () | 788966..789229 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HXS78_RS03790 () | 789301..790167 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| HXS78_RS03795 () | 790252..790449 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| HXS78_RS03800 () | 790461..790952 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| HXS78_RS03805 () | 790949..791326 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| HXS78_RS03810 () | 791373..791747 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| HXS78_RS03815 () | 791827..792048 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HXS78_RS03820 () | 792117..792593 | - | 477 | WP_001186715.1 | RadC family protein | - |
| HXS78_RS03825 () | 792609..793094 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| HXS78_RS03830 () | 793186..794004 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| HXS78_RS03835 () | 794095..794304 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| HXS78_RS03840 () | 794334..795011 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| HXS78_RS03845 () | 795130..796014 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| HXS78_RS03850 () | 796121..797053 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| HXS78_RS03855 () | 797050..797859 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| HXS78_RS03860 () | 799610..800341 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| HXS78_RS03865 () | 800435..801092 | - | 658 | Protein_758 | transposase | - |
| HXS78_RS03870 () | 801526..803130 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| HXS78_RS03875 () | 804727..805293 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| HXS78_RS03880 () | 805413..805562 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| HXS78_RS03885 () | 805577..806149 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| HXS78_RS03890 () | 806218..806454 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| HXS78_RS03895 () | 806723..807271 | + | 549 | WP_177754037.1 | hypothetical protein | - |
| HXS78_RS03900 () | 807290..807538 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| HXS78_RS03905 () | 807607..807798 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| HXS78_RS03910 () | 808201..808892 | - | 692 | Protein_767 | IS1 family transposase | - |
| HXS78_RS03915 () | 808952..809128 | + | 177 | Protein_768 | transketolase family protein | - |
| HXS78_RS03920 () | 809391..809504 | + | 114 | WP_131501864.1 | transposase | - |
| HXS78_RS03925 () | 810355..810921 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| HXS78_RS03930 () | 811162..811977 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HXS78_RS03935 () | 812038..812841 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HXS78_RS03940 () | 812841..813677 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HXS78_RS03945 () | 813983..814225 | + | 243 | WP_000844627.1 | transposase | - |
| HXS78_RS03950 () | 814257..814907 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HXS78_RS03955 () | 815013..816212 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| HXS78_RS03960 () | 816179..816367 | - | 189 | Protein_777 | IS91 family transposase | - |
| HXS78_RS03965 () | 816479..816784 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HXS78_RS03970 () | 816812..818026 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| HXS78_RS03975 () | 818243..819127 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| HXS78_RS03980 () | 819158..819814 | - | 657 | Protein_781 | IS91-like element ISVsa3 family transposase | - |
| HXS78_RS03985 () | 819748..820014 | - | 267 | WP_021512463.1 | P fimbrial regulatory protein KS71A | VF |
| HXS78_RS03990 () | 820449..820763 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HXS78_RS03995 () | 820970..821233 | + | 264 | Protein_784 | Pap fimbrial major pilin protein | VF |
| HXS78_RS04000 () | 821684..822916 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| HXS78_RS04005 () | 823067..824228 | - | 1162 | Protein_786 | IS3 family transposase IS3 | Transposase |
| HXS78_RS04010 () | 824396..825376 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| HXS78_RS04015 () | 825373..826317 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| HXS78_RS04020 () | 826320..827402 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| HXS78_RS04025 () | 827869..828135 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| HXS78_RS04030 () | 828435..828949 | - | 515 | Protein_791 | ISL3 family transposase ISEc38 | Transposase |
| HXS78_RS04035 () | 829557..832970 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| HXS78_RS04040 () | 833034..834668 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| HXS78_RS04045 () | 834665..835807 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| HXS78_RS04050 () | 835816..837438 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| HXS78_RS04055 () | 837438..838334 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| HXS78_RS04060 () | 838557..838786 | - | 230 | Protein_797 | integrase | - |
| HXS78_RS04065 () | 838965..839702 | + | 738 | WP_001398114.1 | porin family protein | - |
| HXS78_RS04070 () | 840122..841018 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| HXS78_RS04075 () | 841067..842146 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| HXS78_RS04080 () | 842193..843764 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| HXS78_RS04085 () | 843761..844027 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| HXS78_RS04090 () | 844167..844364 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| HXS78_RS04095 () | 844417..846090 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| HXS78_RS04100 () | 846234..847268 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| HXS78_RS04105 () | 847318..847679 | + | 362 | Protein_806 | IS1 family transposase IS1A | Transposase |
| HXS78_RS04110 () | 847668..847955 | + | 288 | Protein_807 | transposase | - |
| HXS78_RS04115 () | 848533..849927 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| HXS78_RS04120 () | 850122..851552 | - | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| HXS78_RS04125 () | 851552..852829 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| HXS78_RS04130 () | 852892..855018 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| HXS78_RS04135 () | 855114..856124 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| HXS78_RS04140 () | 856274..857458 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| HXS78_RS04150 () | 857816..858523 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| HXS78_RS04155 () | 858921..861056 | + | 2136 | WP_000839812.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|