MGE detailed information
MGE type: Conjugative plasmid MGE length: 100306 bp
Accession: NZ_CP058225 Location: 1..100306 Organism: Escherichia coli strain 550 Replicon: plasmid p550_IncB_O_K_Z
Accession: NZ_CP058225 Location: 1..100306 Organism: Escherichia coli strain 550 Replicon: plasmid p550_IncB_O_K_Z
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWQ66_RS24500 () | 513..755 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| HWQ66_RS24505 () | 1088..1240 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| HWQ66_RS24510 () | 1237..1398 | - | 162 | WP_001138649.1 | hypothetical protein | - |
| HWQ66_RS24515 () | 1554..2201 | - | 648 | WP_048239464.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HWQ66_RS24520 () | 2289..4448 | - | 2160 | WP_048239462.1 | DotA/TraY family protein | - |
| HWQ66_RS24525 () | 4521..5090 | - | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| HWQ66_RS24530 () | 5087..6292 | - | 1206 | WP_176966450.1 | conjugal transfer protein TraW | - |
| HWQ66_RS24535 () | 6253..6870 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| HWQ66_RS24540 () | 6870..9914 | - | 3045 | WP_021552467.1 | hypothetical protein | - |
| HWQ66_RS24545 () | 10090..10470 | - | 381 | WP_000690886.1 | hypothetical protein | - |
| HWQ66_RS24550 () | 10470..10829 | - | 360 | WP_048239458.1 | hypothetical protein | - |
| HWQ66_RS24555 () | 10884..11702 | - | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| HWQ66_RS24560 () | 11617..11868 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| HWQ66_RS24565 () | 11925..12323 | - | 399 | WP_000086068.1 | hypothetical protein | - |
| HWQ66_RS24570 () | 12372..12899 | - | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| HWQ66_RS24575 () | 12899..13612 | - | 714 | WP_048239456.1 | conjugal transfer protein TraP | - |
| HWQ66_RS24580 () | 13609..14940 | - | 1332 | WP_176966451.1 | conjugal transfer protein TraO | - |
| HWQ66_RS24585 () | 14944..15918 | - | 975 | WP_021526895.1 | hypothetical protein | VF |
| HWQ66_RS24590 () | 15929..16624 | - | 696 | WP_001287261.1 | DotI/IcmL family type IV secretion protein | - |
| HWQ66_RS24595 () | 16636..16986 | - | 351 | WP_001056365.1 | hypothetical protein | - |
| HWQ66_RS24600 () | 17003..21019 | - | 4017 | WP_176966452.1 | DNA primase | - |
| HWQ66_RS24605 () | 21083..21373 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| HWQ66_RS24610 () | 21370..22518 | - | 1149 | WP_000625246.1 | putative protein YggR | VF |
| HWQ66_RS24615 () | 22502..23338 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| HWQ66_RS24620 () | 23335..23787 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| HWQ66_RS24625 () | 23836..24006 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| HWQ66_RS24630 () | 24146..25348 | - | 1203 | WP_000980151.1 | conjugal transfer protein TraF | - |
| HWQ66_RS24635 () | 25438..26259 | - | 822 | WP_000804090.1 | hypothetical protein | - |
| HWQ66_RS24640 () | 26519..26839 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| HWQ66_RS24645 () | 26931..27221 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| HWQ66_RS24650 () | 27263..28432 | - | 1170 | WP_000486835.1 | site-specific integrase | - |
| HWQ66_RS24655 () | 29047..30411 | - | 1365 | WP_001168072.1 | hypothetical protein | VF |
| HWQ66_RS24660 () | 30416..31051 | - | 636 | WP_000478596.1 | prepilin peptidase | - |
| HWQ66_RS24665 () | 31070..31543 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| HWQ66_RS24670 () | 31597..32133 | - | 537 | WP_001011156.1 | cleavage protein | - |
| HWQ66_RS24675 () | 32207..33307 | - | 1101 | WP_000670135.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HWQ66_RS24680 () | 33309..34817 | - | 1509 | WP_000886638.1 | Type II secretion system protein E | VF |
| HWQ66_RS24685 () | 34902..35354 | - | 453 | WP_001112926.1 | type IV pilus biogenesis protein PilP | - |
| HWQ66_RS24690 () | 35344..36639 | - | 1296 | WP_000129889.1 | type 4b pilus protein PilO2 | - |
| HWQ66_RS24695 () | 36660..38279 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| HWQ66_RS24700 () | 38310..38747 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| HWQ66_RS24705 () | 38752..39822 | - | 1071 | WP_001170192.1 | hypothetical protein | VF |
| HWQ66_RS24710 () | 39979..40314 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| HWQ66_RS24715 () | 40431..40748 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| HWQ66_RS24720 () | 40754..42448 | - | 1695 | WP_000482671.1 | flotillin family protein | - |
| HWQ66_RS24725 () | 42475..43095 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| HWQ66_RS24730 () | 43362..44027 | - | 666 | WP_000154143.1 | hypothetical protein | - |
| HWQ66_RS24735 () | 44168..44809 | - | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| HWQ66_RS24740 () | 45512..46384 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| HWQ66_RS24745 () | 47079..47246 | + | 168 | WP_000841010.1 | hypothetical protein | - |
| HWQ66_RS24750 () | 47333..47584 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| HWQ66_RS24755 () | 47581..47868 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HWQ66_RS24760 () | 47878..48423 | + | 546 | WP_000926984.1 | hypothetical protein | - |
| HWQ66_RS24765 () | 49075..49677 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| HWQ66_RS24770 () | 50031..50270 | + | 240 | Protein_55 | hypothetical protein | - |
| HWQ66_RS24775 () | 50305..52983 | - | 2679 | Protein_56 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HWQ66_RS24780 () | 53026..53730 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HWQ66_RS24785 () | 53785..54006 | + | 222 | Protein_58 | Tn3 family transposase | - |
| HWQ66_RS24790 () | 53994..54941 | + | 948 | WP_176966456.1 | colicin | - |
| HWQ66_RS24795 () | 54959..55306 | - | 348 | WP_000762572.1 | colicin transporter | - |
| HWQ66_RS24800 () | 55425..55772 | + | 348 | WP_000142445.1 | hypothetical protein | - |
| HWQ66_RS24805 () | 55792..55953 | - | 162 | WP_000251881.1 | hypothetical protein | - |
| HWQ66_RS24810 () | 56376..56678 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| HWQ66_RS24815 () | 56675..57301 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HWQ66_RS24820 () | 57505..58776 | - | 1272 | WP_000457473.1 | Y-family DNA polymerase | - |
| HWQ66_RS24825 () | 58776..59213 | - | 438 | WP_000109077.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HWQ66_RS24830 () | 59210..59458 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| HWQ66_RS24835 () | 59876..60778 | + | 903 | WP_023842311.1 | DUF1281 domain-containing protein | - |
| HWQ66_RS24840 () | 60775..61086 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| HWQ66_RS24845 () | 61163..61681 | + | 519 | WP_176966453.1 | adenine-specific DNA-methyltransferase | - |
| HWQ66_RS24850 () | 61819..62763 | + | 945 | WP_071604158.1 | tyrosine-type recombinase/integrase | - |
| HWQ66_RS24855 () | 62760..63686 | + | 927 | WP_024216355.1 | tyrosine-type recombinase/integrase | - |
| HWQ66_RS24860 () | 63679..64692 | + | 1014 | WP_069903715.1 | tyrosine-type recombinase/integrase | - |
| HWQ66_RS24865 () | 64887..65462 | + | 576 | WP_069903716.1 | hypothetical protein | - |
| HWQ66_RS24870 () | 65604..65783 | + | 180 | Protein_75 | DNA methylase | - |
| HWQ66_RS24875 () | 65784..66005 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HWQ66_RS24880 () | 66019..66453 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HWQ66_RS24885 () | 66499..67275 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| HWQ66_RS24890 () | 67816..68118 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| HWQ66_RS24895 () | 68165..68584 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| HWQ66_RS24900 () | 68584..68775 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HWQ66_RS24905 () | 68846..69160 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HWQ66_RS24910 () | 69544..70071 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HWQ66_RS24915 () | 70129..70362 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| HWQ66_RS24920 () | 70421..72379 | + | 1959 | WP_001145479.1 | ParB/RepB/Spo0J family partition protein | - |
| HWQ66_RS24925 () | 72434..72868 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HWQ66_RS24930 () | 72865..73584 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| HWQ66_RS24935 () | 73581..74177 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HWQ66_RS24940 () | 74640..75140 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| HWQ66_RS24945 () | 75871..76305 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| HWQ66_RS24950 () | 76398..76664 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| HWQ66_RS24955 () | 76855..77244 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| HWQ66_RS24960 () | 77241..78131 | + | 891 | WP_021552460.1 | Recombination-promoting nuclease RpnA | VF |
| HWQ66_RS24965 () | 78131..78352 | + | 222 | WP_001444727.1 | hypothetical protein | - |
| HWQ66_RS24970 () | 78383..78634 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HWQ66_RS24975 () | 78837..79111 | - | 275 | Protein_96 | hypothetical protein | - |
| HWQ66_RS24980 () | 79212..80060 | + | 849 | WP_001546479.1 | DUF4942 domain-containing protein | - |
| HWQ66_RS24985 () | 80144..80479 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| HWQ66_RS24990 () | 80712..81044 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| HWQ66_RS24995 () | 81056..83767 | + | 2712 | WP_000991386.1 | Protein TraI | Relaxase |
| HWQ66_RS25000 () | 83835..84266 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| HWQ66_RS25005 () | 84364..84594 | - | 231 | WP_032072127.1 | hypothetical protein | - |
| HWQ66_RS25010 () | 85073..87376 | - | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| HWQ66_RS25015 () | 87357..88475 | - | 1119 | WP_176966454.1 | DsbC family protein | - |
| HWQ66_RS25020 () | 88472..89761 | - | 1290 | WP_176966455.1 | IncI1-type conjugal transfer protein TrbA | - |
| HWQ66_RS25025 () | 90197..90393 | + | 197 | Protein_106 | hypothetical protein | - |
| HWQ66_RS25030 () | 90536..90847 | - | 312 | WP_000203481.1 | hypothetical protein | - |
| HWQ66_RS25035 () | 90875..91066 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| HWQ66_RS25040 () | 91076..91441 | - | 366 | WP_000997722.1 | hypothetical protein | - |
| HWQ66_RS25045 () | 91948..96027 | - | 4080 | WP_048239471.1 | Serine protease SepA autotransporter | VF |
| HWQ66_RS25050 () | 96326..97023 | + | 698 | Protein_111 | IS1 family transposase | - |
| HWQ66_RS25055 () | 97197..97664 | - | 468 | WP_000598959.1 | thermonuclease family protein | - |
| HWQ66_RS25060 () | 97824..98447 | + | 624 | WP_048239469.1 | hypothetical protein | - |
| HWQ66_RS25065 () | 98535..98990 | + | 456 | WP_048239467.1 | DUF2569 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|