MGE detailed information
MGE type: Genomic_island MGE length: 36428 bp
Accession: NZ_CP058209 Location: 3955728..3992155 Organism: Escherichia marmotae strain RHB24-C12 Replicon: chromosome
Accession: NZ_CP058209 Location: 3955728..3992155 Organism: Escherichia marmotae strain RHB24-C12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY12_RS19115 () | 3951155..3952648 | - | 1494 | WP_181237730.1 | type II secretion system ATPase GspE | - |
| HVY12_RS19120 () | 3952648..3954705 | - | 2058 | WP_089674837.1 | type II secretion system secretin GspD | - |
| HVY12_RS19125 () | 3954765..3955592 | - | 828 | WP_172822479.1 | type II secretion system protein GspC | - |
| HVY12_RS19130 () | 3955728..3956138 | - | 411 | WP_089674829.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| HVY12_RS19135 () | 3956179..3956937 | - | 759 | WP_089674839.1 | Leader peptidase PppA | VF |
| HVY12_RS19140 () | 3957047..3958915 | - | 1869 | WP_100616749.1 | ricin-type beta-trefoil lectin domain protein | - |
| HVY12_RS19145 () | 3959463..3959618 | - | 156 | Protein_3729 | fimbrial | - |
| HVY12_RS19150 () | 3960025..3960783 | - | 759 | WP_181237731.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| HVY12_RS19155 () | 3960773..3961415 | - | 643 | Protein_3731 | hypothetical protein | - |
| HVY12_RS19160 () | 3961489..3962262 | - | 774 | WP_181237732.1 | hypothetical protein | VF |
| HVY12_RS19165 () | 3962279..3963043 | - | 765 | WP_181237733.1 | hypothetical protein | VF |
| HVY12_RS19170 () | 3963074..3963871 | - | 798 | WP_181238224.1 | hypothetical protein | VF |
| HVY12_RS19175 () | 3964054..3964836 | - | 783 | WP_181237734.1 | hypothetical protein | - |
| HVY12_RS19180 () | 3964929..3965708 | - | 780 | WP_181237735.1 | hypothetical protein | - |
| HVY12_RS19185 () | 3965946..3966437 | - | 492 | WP_181237736.1 | hypothetical protein | VF |
| HVY12_RS19190 () | 3966472..3967263 | - | 792 | WP_181237737.1 | Chaperone protein FaeE | VF |
| HVY12_RS19195 () | 3967256..3969658 | - | 2403 | WP_181238225.1 | Outer membrane usher protein YraJ | VF |
| HVY12_RS19200 () | 3969715..3970257 | - | 543 | WP_096925848.1 | hypothetical protein | VF |
| HVY12_RS19205 () | 3970265..3970564 | - | 300 | WP_001088797.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HVY12_RS19210 () | 3971141..3971347 | + | 207 | WP_181237738.1 | FaeA/PapI family transcriptional regulator | - |
| HVY12_RS19215 () | 3971596..3971840 | - | 245 | Protein_3743 | hypothetical protein | - |
| HVY12_RS19220 () | 3971929..3972441 | - | 513 | WP_181237739.1 | hypothetical protein | - |
| HVY12_RS19225 () | 3972529..3972687 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| HVY12_RS19230 () | 3972684..3972920 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| HVY12_RS19235 () | 3972989..3973564 | - | 576 | WP_000991584.1 | hypothetical protein | - |
| HVY12_RS19240 () | 3973811..3974377 | - | 567 | WP_001126807.1 | inovirus-type Gp2 protein | - |
| HVY12_RS19245 () | 3975942..3977546 | - | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| HVY12_RS19250 () | 3977980..3978636 | + | 657 | Protein_3750 | transposase | - |
| HVY12_RS19255 () | 3978730..3979461 | - | 732 | WP_181237740.1 | inovirus Gp2 family protein | - |
| HVY12_RS19260 () | 3980981..3982111 | - | 1131 | WP_181237741.1 | hypothetical protein | - |
| HVY12_RS19265 () | 3982296..3983180 | + | 885 | WP_000010400.1 | 50S ribosome-binding GTPase | - |
| HVY12_RS19270 () | 3983383..3984063 | + | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| HVY12_RS19275 () | 3984106..3985407 | + | 1302 | WP_000932724.1 | hypothetical protein | - |
| HVY12_RS19280 () | 3985470..3986006 | + | 537 | WP_001000101.1 | DUF4234 domain-containing protein | - |
| HVY12_RS19285 () | 3986082..3986303 | + | 222 | WP_032216444.1 | DUF905 family protein | - |
| HVY12_RS19290 () | 3986402..3987220 | + | 819 | WP_175097112.1 | DUF945 domain-containing protein | - |
| HVY12_RS19295 () | 3987312..3987797 | + | 486 | WP_084560816.1 | antirestriction protein | - |
| HVY12_RS19300 () | 3987813..3988289 | + | 477 | WP_001186724.1 | RadC family protein | - |
| HVY12_RS19305 () | 3988358..3988579 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HVY12_RS19310 () | 3988598..3989242 | + | 645 | WP_000086753.1 | hypothetical protein | - |
| HVY12_RS19315 () | 3989292..3989660 | + | 369 | WP_139792025.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HVY12_RS19320 () | 3989750..3990127 | + | 378 | WP_084560814.1 | TA system toxin CbtA family protein | Toxin Detail |
| HVY12_RS19325 () | 3990124..3990273 | + | 150 | Protein_3765 | hypothetical protein | - |
| HVY12_RS19330 () | 3990349..3990546 | + | 198 | WP_087891818.1 | DUF957 domain-containing protein | - |
| HVY12_RS19335 () | 3990631..3991497 | + | 867 | WP_001290176.1 | DUF4942 domain-containing protein | - |
| HVY12_RS19340 () | 3991569..3991832 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HVY12_RS19345 () | 3991829..3992155 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HVY12_RS19350 () | 3992899..3994434 | + | 1536 | WP_000447015.1 | IS21 family transposase | - |
| HVY12_RS19355 () | 3994451..3995206 | + | 756 | WP_001282653.1 | IS21-like element ISSso4 family helper ATPase IstB | - |
| HVY12_RS19360 () | 3996466..3997002 | - | 537 | WP_181237742.1 | GspM family type II secretion system protein YghD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|