MGE detailed information
MGE type: Conjugative plasmid MGE length: 133995 bp
Accession: NZ_CP058181 Location: 1..133995 Organism: Klebsiella grimontii strain RHBSTW-00039 Replicon: plasmid pRHBSTW-00039_2
Accession: NZ_CP058181 Location: 1..133995 Organism: Klebsiella grimontii strain RHBSTW-00039 Replicon: plasmid pRHBSTW-00039_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV042_RS28675 () | 458..2905 | + | 2448 | WP_063923537.1 | Ag(+)-translocating P-type ATPase SilP | - |
| HV042_RS28680 () | 2946..3143 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| HV042_RS28685 () | 3177..3914 | - | 738 | WP_004118669.1 | hypothetical protein | VF |
| HV042_RS28690 () | 4203..4652 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| HV042_RS28695 () | 4887..6704 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| HV042_RS28700 () | 6710..7600 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| HV042_RS28705 () | 7640..8020 | + | 381 | WP_008455296.1 | copper resistance system metallochaperone PcoC | - |
| HV042_RS28710 () | 8025..8954 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| HV042_RS28715 () | 9009..9689 | + | 681 | WP_063851048.1 | Transcriptional activator protein CopR | VF |
| HV042_RS28720 () | 9686..11086 | + | 1401 | WP_002436614.1 | copper resistance membrane spanning protein PcoS | - |
| HV042_RS28725 () | 11302..11610 | + | 309 | Protein_11 | copper-binding protein | - |
| HV042_RS28730 () | 11678..12658 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| HV042_RS28735 () | 12808..12936 | + | 129 | Protein_13 | copper-binding protein | - |
| HV042_RS28740 () | 13315..13413 | - | 99 | WP_004118688.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV042_RS28745 () | 13400..13579 | - | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HV042_RS28750 () | 13866..14447 | + | 582 | WP_009654315.1 | hypothetical protein | - |
| HV042_RS28755 () | 14603..15604 | + | 1002 | WP_009654304.1 | Abi family protein | - |
| HV042_RS28760 () | 15743..16321 | - | 579 | WP_009654302.1 | hypothetical protein | - |
| HV042_RS28765 () | 16611..16874 | + | 264 | WP_009310051.1 | hypothetical protein | - |
| HV042_RS28770 () | 16871..17437 | + | 567 | WP_009654312.1 | hypothetical protein | - |
| HV042_RS28775 () | 17468..17962 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| HV042_RS28780 () | 18006..18374 | + | 369 | WP_063923539.1 | hypothetical protein | - |
| HV042_RS28785 () | 18405..18608 | + | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| HV042_RS28790 () | 18657..18914 | + | 258 | WP_004098928.1 | hypothetical protein | - |
| HV042_RS28795 () | 19143..20111 | - | 969 | WP_163467572.1 | IS5 family transposase IS903B | Transposase |
| HV042_RS28800 () | 20486..20752 | + | 267 | WP_004098921.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV042_RS28805 () | 20740..21222 | + | 483 | WP_004098919.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV042_RS28810 () | 21381..22913 | - | 1533 | WP_015065592.1 | IS3 family transposase ISKpn38 | Transposase |
| HV042_RS28815 () | 23033..24379 | + | 1347 | WP_077255298.1 | ISNCY family transposase ISLad2 | Transposase |
| HV042_RS28820 () | 24438..25229 | + | 792 | WP_003032641.1 | tetratricopeptide repeat protein | - |
| HV042_RS28825 () | 25270..26052 | - | 783 | Protein_31 | hypothetical protein | - |
| HV042_RS28830 () | 26042..26392 | + | 351 | Protein_32 | IS3 family transposase ISMaq2 | Transposase |
| HV042_RS28835 () | 26423..26761 | + | 339 | Protein_33 | IS5 family transposase IS903B | Transposase |
| HV042_RS28840 () | 26807..26998 | - | 192 | WP_127074617.1 | hypothetical protein | - |
| HV042_RS28845 () | 26995..27156 | - | 162 | WP_003032086.1 | hypothetical protein | - |
| HV042_RS28850 () | 27228..27679 | - | 452 | Protein_36 | IS3 family transposase ISEcl1 | Transposase |
| HV042_RS28855 () | 28061..28468 | - | 408 | WP_004364961.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| HV042_RS28860 () | 28564..29460 | + | 897 | WP_004364974.1 | cation diffusion facilitator family transporter | - |
| HV042_RS28865 () | 29464..29784 | + | 321 | Protein_39 | Lipoprotein signal peptidase | VF |
| HV042_RS28870 () | 29833..30543 | + | 711 | WP_074169301.1 | Flagellar brake protein YcgR | VF |
| HV042_RS28875 () | 30661..31245 | + | 585 | WP_000799244.1 | hypothetical protein | VF |
| HV042_RS28880 () | 31387..32103 | + | 717 | WP_032731930.1 | Cyclic di-GMP phosphodiesterase PdeH | VF |
| HV042_RS28885 () | 32165..32815 | - | 651 | WP_063858805.1 | hypothetical protein | VF |
| HV042_RS28890 () | 32830..33825 | - | 996 | WP_004124708.1 | Fimbria adhesin protein | VF |
| HV042_RS28895 () | 33816..36302 | - | 2487 | WP_014839452.1 | Outer membrane usher protein HtrE | VF |
| HV042_RS28900 () | 36314..37015 | - | 702 | WP_000820820.1 | putative fimbrial chaperone YadV | VF |
| HV042_RS28905 () | 37209..37817 | - | 609 | WP_001493056.1 | hypothetical protein | VF |
| HV042_RS28910 () | 38232..38360 | + | 129 | Protein_48 | IS110 family transposase | - |
| HV042_RS28915 () | 38434..38574 | - | 141 | Protein_49 | IS3 family transposase ISEc14 | Transposase |
| HV042_RS28920 () | 38783..39157 | - | 375 | Protein_50 | IS21 family transposase ISEc62 | Transposase |
| HV042_RS28925 () | 39180..39716 | + | 537 | Protein_51 | IS3 family transposase ISEhe3 | Transposase |
| HV042_RS28930 () | 39996..41078 | + | 1083 | WP_020803817.1 | IS110 family transposase ISEc21 | Transposase |
| HV042_RS28935 () | 41116..41844 | - | 729 | Protein_53 | IS110 family transposase ISEc21 | Transposase |
| HV042_RS28940 () | 42126..42985 | - | 860 | Protein_54 | IS3 family transposase | - |
| HV042_RS28945 () | 43089..43352 | - | 264 | WP_004118209.1 | IS66 family transposase ISPpu19 | Transposase |
| HV042_RS28950 () | 43367..43630 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| HV042_RS28955 () | 43872..44153 | + | 282 | WP_013307885.1 | helix-turn-helix domain-containing protein | - |
| HV042_RS28960 () | 44188..44757 | + | 570 | WP_004118809.1 | Spore protein SP21 | VF |
| HV042_RS28965 () | 44863..47712 | + | 2850 | WP_063923490.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| HV042_RS28970 () | 47712..47852 | + | 141 | WP_023326113.1 | hypothetical protein | - |
| HV042_RS28975 () | 47940..48398 | + | 459 | WP_181334955.1 | Spore protein SP21 | VF |
| HV042_RS28980 () | 48421..49335 | + | 915 | WP_016154559.1 | heat resistance protein YfdX1 | - |
| HV042_RS28985 () | 49438..50325 | + | 888 | WP_181333270.1 | heat resistance protein YfdX2 | - |
| HV042_RS28990 () | 50415..51026 | + | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| HV042_RS28995 () | 51106..52251 | + | 1146 | WP_049100056.1 | hypothetical protein | - |
| HV042_RS29000 () | 52241..52681 | + | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| HV042_RS29005 () | 52685..54400 | + | 1716 | WP_019077719.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| HV042_RS29010 () | 54397..54894 | + | 498 | WP_181334956.1 | heat resistance protein PsiE-GI | - |
| HV042_RS29015 () | 54872..55841 | + | 970 | Protein_69 | M48 family metalloprotease | - |
| HV042_RS29020 () | 55866..57017 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| HV042_RS29025 () | 57242..57631 | - | 390 | Protein_71 | IS5 family transposase ISThi1 | Transposase |
| HV042_RS29030 () | 57862..58857 | + | 996 | WP_004118750.1 | IS110 family transposase IS1663 | Transposase |
| HV042_RS29035 () | 59051..59479 | + | 429 | WP_001554382.1 | GFA family protein | - |
| HV042_RS29040 () | 59999..61081 | + | 1083 | WP_016831235.1 | DNA-binding transcriptional repressor LacI | - |
| HV042_RS29045 () | 61203..64277 | + | 3075 | WP_128805080.1 | beta-galactosidase | - |
| HV042_RS29050 () | 64329..65582 | + | 1254 | WP_023158026.1 | lactose permease | - |
| HV042_RS29055 () | 65648..65740 | + | 93 | Protein_77 | galactoside O-acetyltransferase | - |
| HV042_RS29060 () | 65773..66741 | + | 969 | WP_074181092.1 | IS5 family transposase IS903 | Transposase |
| HV042_RS29065 () | 67205..69514 | + | 2310 | WP_000421673.1 | TerB N-terminal domain-containing protein | - |
| HV042_RS29070 () | 69518..70834 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
| HV042_RS29075 () | 70831..73026 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| HV042_RS29080 () | 74472..75278 | - | 807 | WP_099973685.1 | incFII family plasmid replication initiator RepA | - |
| HV042_RS29085 () | 75337..75408 | - | 72 | WP_009653899.1 | RepA leader peptide Tap | - |
| HV042_RS29090 () | 75626..75895 | - | 270 | WP_032736837.1 | replication regulatory protein RepA | - |
| HV042_RS29095 () | 76033..76530 | - | 498 | WP_163467633.1 | Phospholipase D | VF |
| HV042_RS29100 () | 76765..77019 | - | 255 | Protein_86 | hypothetical protein | - |
| HV042_RS29105 () | 77059..77850 | - | 792 | WP_009653900.1 | DsbA family protein | - |
| HV042_RS29110 () | 77963..78556 | - | 594 | WP_009653903.1 | fertility inhibition protein FinO | - |
| HV042_RS29115 () | 78717..79436 | - | 720 | WP_032736839.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV042_RS29120 () | 79473..84731 | - | 5259 | WP_181334954.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV042_RS29125 () | 84731..87025 | - | 2295 | WP_064411283.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV042_RS29130 () | 87241..87768 | - | 528 | WP_064411282.1 | hypothetical protein | - |
| HV042_RS29135 () | 87779..88867 | - | 1089 | Protein_93 | conjugal transfer protein TraG | - |
| HV042_RS29140 () | 88927..89907 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| HV042_RS29145 () | 90222..90923 | - | 702 | WP_032736872.1 | hypothetical protein | - |
| HV042_RS29150 () | 91162..91554 | - | 393 | WP_032736874.1 | relaxosome protein TraM | - |
| HV042_RS29155 () | 91985..92464 | + | 480 | WP_032716648.1 | hypothetical protein | VF |
| HV042_RS29160 () | 92502..93032 | - | 531 | WP_032716647.1 | antirestriction protein | - |
| HV042_RS29165 () | 93717..93863 | - | 147 | WP_032700834.1 | hypothetical protein | - |
| HV042_RS29170 () | 93957..94304 | - | 348 | WP_032700835.1 | hypothetical protein | - |
| HV042_RS29175 () | 94330..94488 | - | 159 | WP_162180130.1 | hypothetical protein | - |
| HV042_RS29180 () | 94545..94820 | - | 276 | WP_032700867.1 | hypothetical protein | - |
| HV042_RS29185 () | 95639..95920 | - | 282 | WP_004118961.1 | helix-turn-helix transcriptional regulator | - |
| HV042_RS29190 () | 95901..96230 | - | 330 | WP_004118963.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV042_RS29195 () | 96634..97362 | - | 729 | WP_004118966.1 | plasmid SOS inhibition protein A | - |
| HV042_RS29200 () | 97359..97790 | - | 432 | WP_004118968.1 | conjugation system SOS inhibitor PsiB | - |
| HV042_RS29205 () | 98121..98342 | + | 222 | Protein_107 | hypothetical protein | - |
| HV042_RS29210 () | 98616..99179 | - | 564 | WP_032700843.1 | methyltransferase | - |
| HV042_RS29215 () | 99228..100610 | - | 1383 | WP_032700844.1 | DUF3560 domain-containing protein | - |
| HV042_RS29220 () | 100661..100891 | - | 231 | WP_032700845.1 | hypothetical protein | - |
| HV042_RS29225 () | 101048..101187 | - | 140 | Protein_111 | single-stranded DNA-binding protein | - |
| HV042_RS29230 () | 101364..101573 | + | 210 | Protein_112 | hypothetical protein | - |
| HV042_RS29235 () | 101684..101929 | - | 246 | WP_074172513.1 | DNA polymerase III subunit theta | - |
| HV042_RS29240 () | 102115..102306 | - | 192 | WP_032700847.1 | hypothetical protein | - |
| HV042_RS29245 () | 102384..102812 | - | 429 | WP_032700848.1 | antirestriction protein | - |
| HV042_RS29250 () | 102982..103767 | - | 786 | WP_042946295.1 | hypothetical protein | - |
| HV042_RS29255 () | 103821..104240 | - | 420 | WP_032700850.1 | DUF1380 domain-containing protein | - |
| HV042_RS29260 () | 104252..104473 | - | 222 | WP_032700851.1 | hypothetical protein | - |
| HV042_RS29265 () | 104473..105153 | - | 681 | WP_032700852.1 | DNA methylase | - |
| HV042_RS29270 () | 105531..105810 | - | 280 | Protein_120 | hypothetical protein | - |
| HV042_RS29275 () | 106128..106358 | - | 231 | WP_032700853.1 | hypothetical protein | - |
| HV042_RS29280 () | 106422..107093 | - | 672 | WP_032700854.1 | plasmid partitioning/stability family protein | - |
| HV042_RS29285 () | 107096..108067 | - | 972 | WP_032425559.1 | StbA family protein | - |
| HV042_RS29290 () | 108299..108730 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV042_RS29295 () | 108730..110001 | + | 1272 | WP_032700856.1 | Y-family DNA polymerase | - |
| HV042_RS29300 () | 110083..111057 | - | 975 | WP_021312406.1 | ParB/RepB/Spo0J family partition protein | - |
| HV042_RS29305 () | 111057..112262 | - | 1206 | WP_011977818.1 | AAA family ATPase | - |
| HV042_RS29310 () | 112986..113741 | - | 756 | WP_001568031.1 | replication initiation protein RepE | - |
| HV042_RS29315 () | 114481..114594 | + | 114 | WP_162180131.1 | hypothetical protein | - |
| HV042_RS29320 () | 114723..114980 | + | 258 | WP_032700766.1 | hypothetical protein | - |
| HV042_RS29325 () | 115037..115825 | - | 789 | WP_047722707.1 | site-specific integrase | - |
| HV042_RS29330 () | 115822..116151 | - | 330 | WP_032700767.1 | hypothetical protein | - |
| HV042_RS29335 () | 116380..116988 | - | 609 | WP_032700768.1 | hypothetical protein | - |
| HV042_RS29340 () | 117051..117404 | - | 354 | Protein_134 | hypothetical protein | - |
| HV042_RS29345 () | 118092..119087 | + | 996 | WP_049074565.1 | hypothetical protein | - |
| HV042_RS29350 () | 119091..120023 | + | 933 | WP_063858700.1 | hypothetical protein | - |
| HV042_RS29355 () | 120397..121374 | - | 978 | WP_049074561.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HV042_RS29360 () | 122636..123544 | + | 909 | WP_049074569.1 | HNH endonuclease | - |
| HV042_RS29365 () | 123953..124303 | - | 351 | WP_032716639.1 | DUF305 domain-containing protein | - |
| HV042_RS29370 () | 124449..124880 | - | 432 | WP_004118649.1 | silver-binding protein SilE | - |
| HV042_RS29375 () | 125131..126606 | - | 1476 | WP_004118652.1 | copper/silver sensor histidine kinase SilS | - |
| HV042_RS29380 () | 126599..127279 | - | 681 | WP_004118655.1 | Transcriptional regulatory protein CusR | VF |
| HV042_RS29385 () | 127469..128854 | + | 1386 | WP_000475503.1 | Cation efflux system protein CusC | VF |
| HV042_RS29390 () | 128883..129236 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| HV042_RS29395 () | 129350..130642 | + | 1293 | WP_001485328.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| HV042_RS29400 () | 130653..133799 | + | 3147 | WP_000574021.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|