MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94718 bp
Accession: NZ_CP058059 Location: 1..94718 Organism: Escherichia fergusonii strain RHB02-C22 Replicon: plasmid pRHB02-C22_3
Accession: NZ_CP058059 Location: 1..94718 Organism: Escherichia fergusonii strain RHB02-C22 Replicon: plasmid pRHB02-C22_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVV54_RS23380 () | 632..1138 | - | 507 | WP_169037356.1 | hypothetical protein | - |
| HVV54_RS23385 () | 1734..2618 | - | 885 | WP_001113737.1 | RepB family plasmid replication initiator protein | - |
| HVV54_RS23390 () | 2952..3344 | - | 393 | WP_001281114.1 | hypothetical protein | - |
| HVV54_RS23395 () | 3522..3944 | - | 423 | WP_001514466.1 | hypothetical protein | - |
| HVV54_RS23400 () | 3984..4772 | - | 789 | WP_024233195.1 | hypothetical protein | - |
| HVV54_RS23405 () | 5235..5519 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| HVV54_RS23410 () | 5512..6417 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| HVV54_RS23415 () | 6414..8678 | + | 2265 | WP_181465522.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HVV54_RS23430 () | 10237..10662 | + | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| HVV54_RS23435 () | 10662..10826 | + | 165 | WP_000234829.1 | DUF3927 family protein | - |
| HVV54_RS23445 () | 11294..12658 | + | 1365 | WP_046644528.1 | replicative DNA helicase | - |
| HVV54_RS23450 () | 12658..13656 | + | 999 | WP_001198667.1 | hypothetical protein | - |
| HVV54_RS23455 () | 13703..14335 | - | 633 | WP_000535203.1 | hypothetical protein | - |
| HVV54_RS23460 () | 14328..15344 | - | 1017 | WP_042032533.1 | hypothetical protein | - |
| HVV54_RS23465 () | 15346..16131 | - | 786 | WP_032163782.1 | hypothetical protein | - |
| HVV54_RS23470 () | 16118..16846 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| HVV54_RS23475 () | 16850..18067 | - | 1218 | WP_001141908.1 | hypothetical protein | - |
| HVV54_RS23480 () | 18077..18454 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| HVV54_RS23485 () | 18601..18846 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| HVV54_RS23490 () | 18849..19428 | + | 580 | Protein_20 | VRR-NUC domain-containing protein | - |
| HVV54_RS23495 () | 19495..19650 | + | 156 | WP_000008815.1 | hypothetical protein | - |
| HVV54_RS23500 () | 20152..20778 | + | 627 | WP_000484108.1 | norphogenetic protein | - |
| HVV54_RS23505 () | 20775..21452 | + | 678 | WP_181465521.1 | metallophosphoesterase | - |
| HVV54_RS23510 () | 21449..22150 | + | 702 | WP_000684869.1 | hypothetical protein | - |
| HVV54_RS23515 () | 22452..23714 | + | 1263 | WP_097743897.1 | hypothetical protein | - |
| HVV54_RS23520 () | 23787..24293 | + | 507 | WP_042032522.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| HVV54_RS23525 () | 24558..27674 | - | 3117 | WP_106108224.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HVV54_RS23530 () | 27796..29076 | - | 1281 | WP_113449347.1 | restriction endonuclease subunit S | - |
| HVV54_RS23535 () | 29073..30629 | - | 1557 | WP_181465530.1 | type I restriction-modification system subunit M | - |
| HVV54_RS23540 () | 30812..31033 | + | 222 | WP_181465529.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HVV54_RS23545 () | 31033..31413 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HVV54_RS23550 () | 31418..31597 | + | 180 | WP_001339207.1 | hypothetical protein | - |
| HVV54_RS23555 () | 31625..32668 | + | 1044 | WP_069187067.1 | DUF968 domain-containing protein | - |
| HVV54_RS23560 () | 32757..33209 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| HVV54_RS23565 () | 33295..34488 | + | 1194 | WP_096321055.1 | terminase | - |
| HVV54_RS23570 () | 34488..35972 | + | 1485 | WP_096321054.1 | terminase | - |
| HVV54_RS23575 () | 36194..36313 | + | 120 | WP_071594056.1 | ash family protein | - |
| HVV54_RS23580 () | 36332..36553 | + | 222 | WP_112924364.1 | host cell division inhibitor Icd-like protein | - |
| HVV54_RS23585 () | 36550..37662 | + | 1113 | WP_096321053.1 | phage antirepressor KilAC domain-containing protein | - |
| HVV54_RS23590 () | 37695..38546 | - | 852 | WP_000611666.1 | hypothetical protein | - |
| HVV54_RS23595 () | 38657..38866 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| HVV54_RS23600 () | 39471..39692 | + | 222 | WP_000542335.1 | hypothetical protein | - |
| HVV54_RS23605 () | 39700..40731 | + | 1032 | WP_000067531.1 | site-specific integrase | - |
| HVV54_RS23610 () | 40782..41093 | + | 312 | WP_001224239.1 | hypothetical protein | - |
| HVV54_RS23615 () | 41341..41901 | + | 561 | WP_181465528.1 | Ref family protein | - |
| HVV54_RS23620 () | 42089..42730 | + | 642 | WP_001376241.1 | hypothetical protein | - |
| HVV54_RS23625 () | 42787..44091 | + | 1305 | WP_000006034.1 | SIR2 family protein | - |
| HVV54_RS23630 () | 44133..44381 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| HVV54_RS23635 () | 44378..44818 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| HVV54_RS23640 () | 44852..51619 | - | 6768 | WP_181465527.1 | N-6 DNA methylase | - |
| HVV54_RS23645 () | 51695..53404 | + | 1710 | WP_024200402.1 | hypothetical protein | - |
| HVV54_RS23650 () | 53397..54416 | + | 1020 | WP_181465526.1 | head processing protein | - |
| HVV54_RS23655 () | 54708..55265 | - | 558 | WP_001345478.1 | lysozyme | - |
| HVV54_RS23660 () | 55435..55923 | + | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| HVV54_RS23665 () | 56157..57269 | - | 1113 | WP_000724558.1 | porin OmpC | - |
| HVV54_RS23670 () | 58011..58322 | - | 312 | WP_053273051.1 | hypothetical protein | - |
| HVV54_RS23675 () | 58312..61299 | - | 2988 | WP_089529666.1 | hypothetical protein | - |
| HVV54_RS23680 () | 61312..61677 | - | 366 | WP_000175482.1 | hypothetical protein | - |
| HVV54_RS23685 () | 61674..63593 | - | 1920 | WP_089529665.1 | hypothetical protein | - |
| HVV54_RS23690 () | 63595..64197 | - | 603 | WP_032167069.1 | hypothetical protein | - |
| HVV54_RS23695 () | 64184..64627 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| HVV54_RS23700 () | 64624..64953 | - | 330 | WP_000887652.1 | holin | - |
| HVV54_RS23705 () | 65021..65302 | - | 282 | WP_000332809.1 | hypothetical protein | - |
| HVV54_RS23710 () | 65430..66002 | + | 573 | WP_181465525.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HVV54_RS23715 () | 67937..68554 | + | 618 | WP_032145432.1 | hypothetical protein | - |
| HVV54_RS23720 () | 68573..69118 | + | 546 | WP_023356302.1 | tail assembly chaperone | - |
| HVV54_RS23725 () | 69153..69677 | - | 525 | WP_024175644.1 | tail fiber assembly protein | - |
| HVV54_RS23730 () | 69677..73090 | - | 3414 | WP_139593522.1 | tail fiber protein | - |
| HVV54_RS23735 () | 73102..73536 | - | 435 | WP_001286328.1 | hypothetical protein | - |
| HVV54_RS23740 () | 73615..74451 | - | 837 | WP_001189836.1 | hypothetical protein | - |
| HVV54_RS23745 () | 74451..75884 | - | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| HVV54_RS23750 () | 75881..76237 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| HVV54_RS23755 () | 76237..79659 | - | 3423 | WP_181465523.1 | transglycosylase SLT domain-containing protein | - |
| HVV54_RS23760 () | 79741..80622 | - | 882 | WP_000926355.1 | hypothetical protein | - |
| HVV54_RS23765 () | 80637..81248 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| HVV54_RS23770 () | 81259..81825 | - | 567 | WP_069354086.1 | hypothetical protein | - |
| HVV54_RS23775 () | 81906..82445 | - | 540 | WP_001033469.1 | DUF5384 family protein | - |
| HVV54_RS23780 () | 82449..82961 | - | 513 | WP_000039791.1 | hypothetical protein | - |
| HVV54_RS23785 () | 83581..83802 | + | 222 | WP_000245712.1 | host cell division inhibitor Icd-like protein | - |
| HVV54_RS23790 () | 83799..84833 | + | 1035 | WP_023156145.1 | phage antirepressor KilAC domain-containing protein | - |
| HVV54_RS23795 () | 84997..85797 | + | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| HVV54_RS23800 () | 85827..86672 | + | 846 | WP_168427869.1 | Replication protein repL | - |
| HVV54_RS23805 () | 86723..86968 | + | 246 | WP_168427870.1 | hypothetical protein | - |
| HVV54_RS23810 () | 87151..87306 | + | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| HVV54_RS23815 () | 87423..87932 | - | 510 | WP_032192921.1 | hypothetical protein | - |
| HVV54_RS23820 () | 87944..88525 | - | 582 | WP_000035301.1 | hypothetical protein | - |
| HVV54_RS23825 () | 88561..89376 | - | 816 | WP_001373609.1 | hypothetical protein | - |
| HVV54_RS23830 () | 89386..90975 | - | 1590 | WP_000085146.1 | hypothetical protein | - |
| HVV54_RS23835 () | 91036..92742 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| HVV54_RS23840 () | 92967..93968 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|