MGE detailed information
MGE type: Prophage MGE length: 86211 bp
Accession: NZ_CP057681 Location: 1667212..1753422 Organism: Escherichia fergusonii strain RHB18-C04 Replicon: chromosome
Accession: NZ_CP057681 Location: 1667212..1753422 Organism: Escherichia fergusonii strain RHB18-C04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVX35_RS08085 () | 1662314..1663405 | - | 1092 | WP_000521933.1 | EAL domain-containing protein | - |
| HVX35_RS08090 () | 1664550..1665029 | + | 480 | WP_181199262.1 | GNAT family N-acetyltransferase | - |
| HVX35_RS08095 () | 1665310..1666161 | + | 852 | WP_001195265.1 | aldo/keto reductase | - |
| HVX35_RS08100 () | 1666188..1667177 | + | 990 | WP_181199263.1 | aldo/keto reductase | - |
| HVX35_RS08105 () | 1667212..1668105 | - | 894 | WP_000910705.1 | HTH-type transcriptional regulator PgrR | VF |
| HVX35_RS08110 () | 1668191..1668502 | + | 312 | Protein_1588 | hypothetical protein | - |
| HVX35_RS08115 () | 1668638..1668739 | + | 102 | WP_000662204.1 | hypothetical protein | - |
| HVX35_RS08120 () | 1668880..1669145 | + | 266 | Protein_1590 | tyrosine-type recombinase/integrase | - |
| HVX35_RS08125 () | 1669322..1670599 | + | 1278 | WP_173672907.1 | hypothetical protein ; Integrase | Integrase |
| HVX35_RS08130 () | 1670681..1671394 | - | 714 | WP_096985338.1 | hypothetical protein | - |
| HVX35_RS08135 () | 1671429..1673258 | - | 1830 | WP_096985337.1 | hypothetical protein | - |
| HVX35_RS08140 () | 1673279..1673482 | - | 204 | WP_000452041.1 | hypothetical protein | - |
| HVX35_RS08145 () | 1673569..1674597 | - | 1029 | WP_096985335.1 | major capsid protein | - |
| HVX35_RS08150 () | 1674616..1674978 | - | 363 | WP_096985334.1 | hypothetical protein | - |
| HVX35_RS08155 () | 1674975..1675187 | - | 213 | WP_000898166.1 | hypothetical protein | - |
| HVX35_RS08160 () | 1675528..1675866 | - | 339 | WP_032220863.1 | hypothetical protein | - |
| HVX35_RS08165 () | 1675868..1676275 | - | 408 | WP_028985909.1 | hypothetical protein | - |
| HVX35_RS08170 () | 1676408..1676683 | - | 276 | WP_089623217.1 | hypothetical protein | - |
| HVX35_RS08175 () | 1676695..1677363 | - | 669 | WP_089638754.1 | helix-turn-helix domain-containing protein | - |
| HVX35_RS08180 () | 1677418..1677588 | - | 171 | WP_000005469.1 | hypothetical protein | - |
| HVX35_RS08185 () | 1677608..1677796 | - | 189 | WP_000870969.1 | hypothetical protein | - |
| HVX35_RS08190 () | 1679932..1680471 | + | 540 | WP_059250298.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HVX35_RS08195 () | 1680911..1681069 | - | 159 | WP_000788777.1 | hypothetical protein | - |
| HVX35_RS08200 () | 1682421..1683140 | + | 720 | WP_021537014.1 | hypothetical protein | - |
| HVX35_RS08205 () | 1683240..1683809 | - | 570 | WP_181464488.1 | tail fiber assembly protein | - |
| HVX35_RS08210 () | 1683809..1686502 | - | 2694 | WP_181464489.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HVX35_RS08215 () | 1686567..1687166 | - | 600 | WP_001233185.1 | Outer membrane protein X | VF |
| HVX35_RS08220 () | 1687234..1690722 | - | 3489 | WP_181464490.1 | host specificity protein J | - |
| HVX35_RS08225 () | 1690783..1691415 | - | 633 | WP_181464491.1 | tail assembly protein | - |
| HVX35_RS08230 () | 1691352..1692095 | - | 744 | WP_181464492.1 | C40 family peptidase | - |
| HVX35_RS08235 () | 1692101..1692799 | - | 699 | WP_001152538.1 | phage minor tail protein L | - |
| HVX35_RS08240 () | 1692799..1693128 | - | 330 | WP_000847332.1 | phage tail protein | - |
| HVX35_RS08245 () | 1693125..1695686 | - | 2562 | WP_181464493.1 | phage tail tape measure protein | - |
| HVX35_RS08250 () | 1695679..1696113 | - | 435 | WP_181464494.1 | phage tail assembly protein T | - |
| HVX35_RS08255 () | 1696095..1696517 | - | 423 | WP_181464495.1 | phage minor tail protein G | - |
| HVX35_RS08260 () | 1696533..1697273 | - | 741 | WP_096002590.1 | phage tail protein | - |
| HVX35_RS08265 () | 1697281..1697676 | - | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| HVX35_RS08270 () | 1697673..1698251 | - | 579 | WP_129942060.1 | phage tail protein | - |
| HVX35_RS08275 () | 1698263..1698616 | - | 354 | WP_000752972.1 | head-tail joining protein | - |
| HVX35_RS08280 () | 1698628..1699026 | - | 399 | WP_000158924.1 | DNA-packaging protein FI | - |
| HVX35_RS08285 () | 1699068..1700093 | - | 1026 | WP_000063221.1 | major capsid protein | - |
| HVX35_RS08290 () | 1700149..1700481 | - | 333 | WP_001358225.1 | head decoration protein | - |
| HVX35_RS08295 () | 1700491..1701810 | - | 1320 | WP_181464496.1 | S49 family peptidase | - |
| HVX35_RS08300 () | 1701791..1703392 | - | 1602 | WP_057695758.1 | phage portal protein | - |
| HVX35_RS08305 () | 1703389..1703595 | - | 207 | WP_000198149.1 | gpW family protein | - |
| HVX35_RS08310 () | 1703592..1705517 | - | 1926 | WP_046082379.1 | phage terminase large subunit family protein | - |
| HVX35_RS08315 () | 1705492..1706037 | - | 546 | WP_000867489.1 | terminase small subunit | - |
| HVX35_RS08320 () | 1706424..1706657 | + | 234 | WP_046082380.1 | YlcI/YnfO family protein | - |
| HVX35_RS08325 () | 1706715..1707125 | + | 411 | WP_001537735.1 | DUF1398 domain-containing protein | - |
| HVX35_RS08330 () | 1707758..1708246 | - | 489 | WP_001072460.1 | GIY-YIG nuclease family protein | - |
| HVX35_RS08335 () | 1708456..1708914 | - | 459 | WP_078080990.1 | lysis protein | - |
| HVX35_RS08340 () | 1708911..1709408 | - | 498 | WP_001135280.1 | lysozyme RrrD | - |
| HVX35_RS08345 () | 1709408..1709623 | - | 216 | WP_000839582.1 | phage lysis protein EssD | - |
| HVX35_RS08350 () | 1709812..1710543 | - | 732 | WP_001146305.1 | helix-turn-helix domain-containing protein | - |
| HVX35_RS08355 () | 1710893..1711852 | - | 960 | WP_000592546.1 | DUF523 and DUF1722 domain-containing protein | - |
| HVX35_RS08360 () | 1712045..1712569 | + | 525 | WP_000780581.1 | lipocalin family protein | - |
| HVX35_RS08365 () | 1712725..1713102 | - | 378 | WP_001204777.1 | antitermination protein | - |
| HVX35_RS08370 () | 1713188..1713328 | - | 141 | WP_000971055.1 | YlcG family protein | - |
| HVX35_RS08375 () | 1713325..1713687 | - | 363 | WP_001099515.1 | crossover junction endodeoxyribonuclease RusA | - |
| HVX35_RS08380 () | 1713684..1713974 | - | 291 | WP_000774486.1 | DUF1364 domain-containing protein | - |
| HVX35_RS08385 () | 1713967..1714137 | - | 171 | WP_000224915.1 | protein NinE from lambdoid prophage DLP12 | - |
| HVX35_RS08390 () | 1714137..1714592 | - | 456 | WP_181464497.1 | DNA base-flipping protein YbcN | - |
| HVX35_RS08395 () | 1714778..1715365 | - | 588 | WP_042110072.1 | hypothetical protein | - |
| HVX35_RS08400 () | 1715381..1715608 | - | 228 | WP_001743044.1 | DNA polymerase III subunit theta | - |
| HVX35_RS08405 () | 1715643..1715843 | - | 201 | WP_024166776.1 | hypothetical protein | - |
| HVX35_RS08410 () | 1716006..1716614 | - | 609 | WP_024166775.1 | hypothetical protein | - |
| HVX35_RS08415 () | 1717226..1719121 | - | 1896 | WP_181464498.1 | NACHT domain-containing protein | - |
| HVX35_RS08420 () | 1719528..1719689 | - | 162 | WP_086660542.1 | MarR family transcriptional regulator | - |
| HVX35_RS08425 () | 1719686..1720387 | - | 702 | WP_049072724.1 | Replication protein P | - |
| HVX35_RS08430 () | 1720384..1721403 | - | 1020 | WP_077792657.1 | replication protein | - |
| HVX35_RS08435 () | 1721400..1721939 | - | 540 | WP_181464499.1 | toxin YdaT domain-containing protein | - |
| HVX35_RS08440 () | 1722009..1722239 | - | 231 | WP_001067459.1 | helix-turn-helix domain-containing protein | - |
| HVX35_RS08445 () | 1722344..1723033 | + | 690 | WP_000858975.1 | helix-turn-helix transcriptional regulator | - |
| HVX35_RS08450 () | 1723263..1723643 | + | 381 | WP_001226568.1 | outer membrane protein assembly factor BamE | - |
| HVX35_RS08455 () | 1724124..1724330 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| HVX35_RS08460 () | 1724406..1724702 | + | 297 | WP_181464500.1 | host-nuclease inhibitor protein Gam | - |
| HVX35_RS08465 () | 1724708..1725493 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| HVX35_RS08470 () | 1725490..1726170 | + | 681 | WP_000186812.1 | YqaJ viral recombinase family protein | - |
| HVX35_RS08475 () | 1726167..1726328 | + | 162 | WP_181464501.1 | DUF1317 family protein | - |
| HVX35_RS08480 () | 1726321..1726878 | + | 558 | WP_181464502.1 | phage N-6-adenine-methyltransferase | - |
| HVX35_RS08485 () | 1726889..1727170 | + | 282 | WP_077696591.1 | cell division protein ZapA | - |
| HVX35_RS08490 () | 1727269..1727487 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| HVX35_RS08495 () | 1727535..1727813 | + | 279 | WP_023568619.1 | DUF4222 domain-containing protein | - |
| HVX35_RS08500 () | 1727882..1728214 | + | 333 | Protein_1666 | helix-turn-helix domain-containing protein | - |
| HVX35_RS08505 () | 1728106..1729266 | + | 1161 | WP_002432357.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HVX35_RS08515 () | 1729471..1730724 | - | 1254 | WP_181199272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HVX35_RS08520 () | 1730736..1731839 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HVX35_RS08525 () | 1732127..1733182 | + | 1056 | WP_000749856.1 | phosphoporin PhoE | - |
| HVX35_RS08530 () | 1733221..1733622 | - | 402 | WP_000174676.1 | sigma factor-binding protein Crl | - |
| HVX35_RS08535 () | 1733680..1734924 | - | 1245 | WP_181199273.1 | esterase FrsA | - |
| - () | 1734340..1734420 | - | 81 | NuclAT_9 | - | - |
| - () | 1734340..1734420 | - | 81 | NuclAT_9 | - | - |
| - () | 1734340..1734420 | - | 81 | NuclAT_9 | - | - |
| - () | 1734340..1734420 | - | 81 | NuclAT_9 | - | - |
| HVX35_RS08540 () | 1735017..1735475 | - | 459 | WP_001291987.1 | xanthine phosphoribosyltransferase | - |
| HVX35_RS08545 () | 1735736..1737193 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| HVX35_RS08550 () | 1737202..1737483 | + | 282 | WP_000106440.1 | hypothetical protein | - |
| HVX35_RS08555 () | 1737492..1738016 | - | 525 | WP_141095971.1 | metal-dependent hydrolase | - |
| HVX35_RS08560 () | 1738078..1738692 | - | 615 | Protein_1677 | peptide chain release factor H | - |
| HVX35_RS08565 () | 1738689..1739828 | - | 1140 | WP_181199275.1 | RNA ligase RtcB family protein | - |
| HVX35_RS08570 () | 1740146..1740598 | - | 453 | WP_181199276.1 | GNAT family N-acetyltransferase | - |
| HVX35_RS08575 () | 1740608..1741006 | - | 399 | WP_181199277.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HVX35_RS08580 () | 1741009..1741302 | - | 294 | WP_181199278.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HVX35_RS08585 () | 1741354..1742409 | - | 1056 | WP_181199279.1 | DNA polymerase IV | - |
| HVX35_RS08590 () | 1742480..1743266 | - | 787 | Protein_1683 | Chemotaxis protein LafU | VF |
| HVX35_RS08595 () | 1743211..1744950 | + | 1740 | WP_181199280.1 | Flagellar biosynthesis protein FlhA | VF |
| HVX35_RS08600 () | 1745035..1746855 | - | 1821 | WP_181199281.1 | exodeoxyribonuclease V subunit alpha | - |
| HVX35_RS08605 () | 1746852..1750403 | - | 3552 | WP_181199282.1 | exodeoxyribonuclease V subunit beta | - |
| HVX35_RS08610 () | 1750396..1753284 | - | 2889 | WP_001138269.1 | pitrilysin | - |
| HVX35_RS08615 () | 1753461..1756829 | - | 3369 | WP_000946806.1 | exodeoxyribonuclease V subunit gamma | - |
| HVX35_RS08620 () | 1756845..1757165 | - | 321 | WP_001164797.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| HVX35_RS08625 () | 1757150..1757554 | - | 405 | WP_046083260.1 | DUF2509 family protein | - |
| HVX35_RS08630 () | 1757551..1758114 | - | 564 | WP_176912997.1 | prepilin peptidase-dependent protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|