MGE detailed information
MGE type: Conjugative plasmid MGE length: 89313 bp
Accession: NZ_CP057659 Location: 1..89313 Organism: Escherichia fergusonii strain RHB19-C05 Replicon: plasmid pRHB19-C05_3
Accession: NZ_CP057659 Location: 1..89313 Organism: Escherichia fergusonii strain RHB19-C05 Replicon: plasmid pRHB19-C05_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVX45_RS22735 () | 1..1032 | + | 1032 | WP_024227073.1 | replication initiation protein | - |
| HVX45_RS22740 () | 2102..2611 | - | 510 | WP_053291131.1 | hypothetical protein | - |
| HVX45_RS22745 () | 2667..3269 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| HVX45_RS22750 () | 3623..4969 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| HVX45_RS22755 () | 5248..7128 | + | 1881 | WP_128452173.1 | colicin | - |
| HVX45_RS22760 () | 7150..7485 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| HVX45_RS22765 () | 7614..7961 | + | 348 | WP_000142449.1 | hypothetical protein | - |
| HVX45_RS22770 () | 7981..8571 | - | 591 | WP_059333306.1 | hypothetical protein | - |
| HVX45_RS22775 () | 8571..8828 | - | 258 | WP_001542562.1 | hypothetical protein | - |
| HVX45_RS22780 () | 9397..9810 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| HVX45_RS22785 () | 9812..10591 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| HVX45_RS22790 () | 10771..11415 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HVX45_RS22795 () | 11502..11810 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HVX45_RS22800 () | 12224..13204 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HVX45_RS22805 () | 13197..13613 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HVX45_RS22810 () | 13615..14889 | - | 1275 | WP_063077240.1 | Y-family DNA polymerase | - |
| HVX45_RS22815 () | 14889..15326 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HVX45_RS22820 () | 15323..15571 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| HVX45_RS22825 () | 15989..16891 | + | 903 | WP_137489562.1 | DUF1281 domain-containing protein | - |
| HVX45_RS22830 () | 16888..17199 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| HVX45_RS22835 () | 17275..17958 | + | 684 | WP_000086148.1 | DNA methylase | - |
| HVX45_RS22840 () | 17959..18180 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| HVX45_RS22845 () | 18193..18627 | + | 435 | WP_032307291.1 | DUF1380 family protein | - |
| HVX45_RS22850 () | 18678..19448 | + | 771 | WP_069896314.1 | hypothetical protein | - |
| HVX45_RS22855 () | 19989..20291 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HVX45_RS22860 () | 20338..20760 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HVX45_RS22865 () | 20757..20948 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HVX45_RS22870 () | 21019..21333 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HVX45_RS22875 () | 21717..22244 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HVX45_RS22880 () | 22302..22535 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| HVX45_RS22885 () | 22594..24552 | + | 1959 | WP_100040014.1 | ParB/RepB/Spo0J family partition protein | - |
| HVX45_RS22890 () | 24607..25041 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HVX45_RS22895 () | 25038..25757 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| HVX45_RS22900 () | 25754..26350 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HVX45_RS22905 () | 26813..27313 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| HVX45_RS22910 () | 28042..28476 | + | 435 | WP_000218864.1 | hypothetical protein | - |
| HVX45_RS22915 () | 28570..28836 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HVX45_RS22920 () | 28901..29791 | + | 891 | WP_053289965.1 | Recombination-promoting nuclease RpnA | VF |
| HVX45_RS22925 () | 29853..30059 | + | 207 | WP_105207882.1 | hypothetical protein | VF |
| HVX45_RS22930 () | 30090..30341 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HVX45_RS22935 () | 30375..30572 | - | 198 | WP_032171889.1 | hypothetical protein | - |
| HVX45_RS22940 () | 30921..31769 | + | 849 | WP_021532394.1 | DUF4942 domain-containing protein | - |
| HVX45_RS22945 () | 31854..32189 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HVX45_RS22950 () | 32423..32755 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HVX45_RS22955 () | 32766..35465 | + | 2700 | WP_171961801.1 | Protein TraI | Relaxase |
| HVX45_RS22960 () | 35502..37793 | - | 2292 | WP_109444318.1 | conjugal transfer protein TrbC | - |
| HVX45_RS22965 () | 37786..38856 | - | 1071 | WP_001542508.1 | IncI1-type conjugal transfer protein TrbB | - |
| HVX45_RS22970 () | 38875..40083 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 40263..40325 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40263..40325 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40263..40325 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 40263..40325 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| HVX45_RS22975 () | 40375..40527 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HVX45_RS22980 () | 40599..40850 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HVX45_RS22985 () | 41150..41446 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| HVX45_RS22990 () | 41511..41687 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| HVX45_RS22995 () | 42079..42288 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HVX45_RS23000 () | 42360..43010 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HVX45_RS23005 () | 43084..45252 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| HVX45_RS23010 () | 45349..45933 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HVX45_RS23015 () | 45962..47164 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| HVX45_RS23020 () | 47131..47745 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| HVX45_RS23025 () | 47745..50789 | - | 3045 | WP_024227038.1 | IncI1-type conjugal transfer protein TraU | - |
| HVX45_RS23030 () | 50879..51679 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HVX45_RS23035 () | 51663..51851 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HVX45_RS23040 () | 51915..52319 | - | 405 | WP_001422824.1 | IncI1-type conjugal transfer protein TraR | - |
| HVX45_RS23045 () | 52370..52897 | - | 528 | WP_022630880.1 | conjugal transfer protein TraQ | - |
| HVX45_RS23050 () | 52897..53601 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| HVX45_RS23055 () | 53601..54890 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| HVX45_RS23060 () | 54893..55876 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| HVX45_RS23065 () | 55887..56579 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| HVX45_RS23070 () | 56576..56923 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HVX45_RS23075 () | 56941..60708 | - | 3768 | WP_024227037.1 | DNA primase | - |
| HVX45_RS23080 () | 60799..61350 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HVX45_RS23085 () | 61365..61655 | - | 291 | WP_071791905.1 | conjugal transfer protein | - |
| HVX45_RS23090 () | 61652..62800 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| HVX45_RS23095 () | 62797..63615 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| HVX45_RS23100 () | 63612..64070 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HVX45_RS23105 () | 64464..65048 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HVX45_RS23110 () | 65108..66310 | - | 1203 | WP_128452171.1 | conjugal transfer protein TraF | - |
| HVX45_RS23115 () | 66396..67220 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| HVX45_RS23120 () | 67371..68525 | - | 1155 | WP_001139955.1 | integrase | - |
| HVX45_RS23125 () | 68860..69066 | - | 207 | WP_000008650.1 | hypothetical protein | - |
| HVX45_RS23130 () | 69636..69833 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| HVX45_RS23135 () | 69830..70078 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| HVX45_RS23140 () | 70213..71583 | - | 1371 | WP_001393542.1 | hypothetical protein | VF |
| HVX45_RS23145 () | 71583..72239 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| HVX45_RS23150 () | 72224..72784 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| HVX45_RS23155 () | 72794..73408 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| HVX45_RS23160 () | 73426..74523 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HVX45_RS23165 () | 74536..76089 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HVX45_RS23170 () | 76100..76552 | - | 453 | WP_001247870.1 | hypothetical protein | VF |
| HVX45_RS23175 () | 76539..77834 | - | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| HVX45_RS23180 () | 77827..79509 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HVX45_RS23185 () | 79523..79960 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| HVX45_RS23190 () | 79960..81027 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| HVX45_RS23195 () | 81651..81947 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| HVX45_RS23200 () | 82096..82773 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| HVX45_RS23205 () | 82773..83120 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HVX45_RS23210 () | 83140..84711 | + | 1572 | WP_000381387.1 | IS66 family transposase ISCro1 | Transposase |
| HVX45_RS23215 () | 84821..85075 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HVX45_RS23220 () | 85237..85788 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| HVX45_RS23225 () | 85961..86644 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HVX45_RS23230 () | 86898..87431 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HVX45_RS23235 () | 87873..88160 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| HVX45_RS23240 () | 88078..88341 | - | 264 | WP_001749178.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|