MGE detailed information
MGE type: Prophage MGE length: 70543 bp
Accession: NZ_CP057632 Location: 685127..755669 Organism: Citrobacter sp. RHB20-C15 Replicon: chromosome
Accession: NZ_CP057632 Location: 685127..755669 Organism: Citrobacter sp. RHB20-C15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVX63_RS03310 () | 681316..681999 | - | 684 | WP_044255793.1 | fimbria/pilus periplasmic chaperone | - |
| HVX63_RS03315 () | 682111..682647 | - | 537 | WP_044255791.1 | type 1 fimbrial protein | - |
| HVX63_RS03320 () | 683222..683566 | - | 345 | WP_082010060.1 | DUF1090 domain-containing protein | - |
| HVX63_RS03325 () | 684040..684666 | - | 627 | WP_052443889.1 | hypothetical protein | - |
| HVX63_RS03330 () | 685127..686443 | + | 1317 | WP_181825231.1 | Prophage integrase IntA ; Integrase | Integrase |
| HVX63_RS03335 () | 686741..687388 | - | 648 | WP_181825232.1 | TIGR02646 family protein | - |
| HVX63_RS03340 () | 687391..689046 | - | 1656 | WP_181825233.1 | AAA family ATPase | - |
| HVX63_RS03345 () | 689043..689975 | - | 933 | WP_057950972.1 | retron St85 family RNA-directed DNA polymerase | - |
| HVX63_RS03350 () | 690669..690827 | - | 159 | WP_100154784.1 | hypothetical protein | - |
| HVX63_RS03355 () | 691083..692081 | + | 999 | WP_181825234.1 | hypothetical protein | - |
| HVX63_RS03360 () | 692208..692444 | + | 237 | WP_065696798.1 | AlpA family phage regulatory protein | - |
| HVX63_RS03365 () | 692565..693980 | + | 1416 | WP_181825235.1 | DUF3987 domain-containing protein | - |
| HVX63_RS03370 () | 694284..694910 | + | 627 | WP_057950970.1 | inovirus Gp2 family protein | - |
| HVX63_RS03375 () | 695116..698430 | - | 3315 | WP_181825236.1 | NERD domain-containing protein | - |
| HVX63_RS03380 () | 698925..699800 | + | 876 | WP_181825237.1 | GTPase family protein | - |
| HVX63_RS03385 () | 700001..700705 | + | 705 | WP_047666967.1 | WYL domain-containing protein | - |
| HVX63_RS03390 () | 700705..701274 | + | 570 | WP_181825418.1 | hypothetical protein | - |
| HVX63_RS03395 () | 701311..701763 | + | 453 | WP_181825238.1 | hypothetical protein | - |
| HVX63_RS03400 () | 701760..702209 | + | 450 | WP_181825239.1 | hypothetical protein | - |
| HVX63_RS03405 () | 702281..702511 | + | 231 | WP_181825240.1 | DUF905 domain-containing protein | - |
| HVX63_RS03410 () | 702609..703430 | + | 822 | WP_181825241.1 | DUF945 domain-containing protein | - |
| HVX63_RS03415 () | 703461..703904 | + | 444 | WP_181825242.1 | antirestriction protein | - |
| HVX63_RS03420 () | 703913..704395 | + | 483 | WP_181825243.1 | RadC family protein | - |
| HVX63_RS03425 () | 704404..704625 | + | 222 | WP_181825244.1 | DUF987 domain-containing protein | - |
| HVX63_RS03430 () | 704643..704960 | + | 318 | WP_181825245.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HVX63_RS03435 () | 704981..705322 | + | 342 | WP_181825246.1 | TA system toxin CbtA family protein | Toxin Detail |
| HVX63_RS03440 () | 705656..706882 | - | 1227 | WP_181825247.1 | hypothetical protein | - |
| HVX63_RS03445 () | 706884..707915 | - | 1032 | WP_181825248.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HVX63_RS03450 () | 707915..708508 | - | 594 | WP_181825249.1 | helix-turn-helix domain-containing protein | - |
| HVX63_RS03455 () | 708616..708837 | + | 222 | WP_181825250.1 | regulator | - |
| HVX63_RS03460 () | 708868..709371 | + | 504 | WP_181825251.1 | phage regulatory CII family protein | - |
| HVX63_RS03465 () | 709381..709608 | + | 228 | WP_044328540.1 | DUF2724 domain-containing protein | - |
| HVX63_RS03470 () | 709598..710026 | + | 429 | WP_181825252.1 | hypothetical protein | - |
| HVX63_RS03475 () | 710026..710427 | + | 402 | WP_181825253.1 | hypothetical protein | - |
| HVX63_RS03480 () | 710495..710728 | + | 234 | WP_181825254.1 | DUF2732 family protein | - |
| HVX63_RS03485 () | 710719..711579 | + | 861 | WP_181825255.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HVX63_RS03490 () | 711576..713597 | + | 2022 | WP_181825256.1 | replication endonuclease | - |
| HVX63_RS03495 () | 713717..713923 | + | 207 | WP_000364824.1 | hypothetical protein | - |
| HVX63_RS03500 () | 713897..714220 | - | 324 | WP_044267931.1 | ogr/Delta-like zinc finger family protein | - |
| HVX63_RS03505 () | 714217..715278 | - | 1062 | WP_000038357.1 | phage portal protein | - |
| HVX63_RS03510 () | 715275..717050 | - | 1776 | WP_181825257.1 | terminase family protein | - |
| HVX63_RS03515 () | 717212..718015 | + | 804 | WP_181825258.1 | GPO family capsid scaffolding protein | - |
| HVX63_RS03520 () | 718078..719100 | + | 1023 | WP_032084293.1 | phage major capsid protein, P2 family | - |
| HVX63_RS03525 () | 719104..719805 | + | 702 | WP_163426108.1 | terminase | - |
| HVX63_RS03530 () | 719902..720354 | + | 453 | WP_181825259.1 | head completion/stabilization protein | - |
| HVX63_RS03535 () | 720351..720857 | + | 507 | WP_047657760.1 | phage tail protein | - |
| HVX63_RS03540 () | 720854..721561 | + | 708 | WP_181825260.1 | hypothetical protein | - |
| HVX63_RS03545 () | 721558..722685 | + | 1128 | WP_044267909.1 | DUF2586 family protein | - |
| HVX63_RS03550 () | 722682..723137 | + | 456 | WP_000166744.1 | DUF2597 family protein | - |
| HVX63_RS03555 () | 723147..723449 | + | 303 | WP_181825261.1 | phage holin family protein | - |
| HVX63_RS03560 () | 723436..723777 | + | 342 | WP_181825262.1 | M15 family metallopeptidase | - |
| HVX63_RS03565 () | 723777..724115 | + | 339 | WP_181825263.1 | hypothetical protein | - |
| HVX63_RS03570 () | 724087..724275 | + | 189 | WP_181825264.1 | hypothetical protein | - |
| HVX63_RS03575 () | 724262..724519 | + | 258 | WP_000435058.1 | putative phage tail assembly chaperone | - |
| HVX63_RS03580 () | 724707..726674 | + | 1968 | WP_181825265.1 | phage tail tape measure protein | - |
| HVX63_RS03585 () | 726671..727000 | + | 330 | WP_181825266.1 | DUF2590 family protein | - |
| HVX63_RS03590 () | 726997..728181 | + | 1185 | WP_181825267.1 | baseplate J/gp47 family protein | - |
| HVX63_RS03595 () | 728174..728761 | + | 588 | WP_181825268.1 | hypothetical protein | - |
| HVX63_RS03600 () | 728772..730346 | + | 1575 | WP_181825269.1 | phage tail protein | - |
| HVX63_RS03605 () | 730346..730933 | + | 588 | WP_181825270.1 | tail fiber assembly protein | - |
| HVX63_RS03610 () | 730923..731648 | + | 726 | WP_181825271.1 | hypothetical protein | - |
| HVX63_RS03615 () | 731620..732165 | + | 546 | WP_181825272.1 | hypothetical protein | - |
| HVX63_RS03620 () | 732165..733868 | + | 1704 | WP_181825273.1 | hypothetical protein | - |
| HVX63_RS03625 () | 733974..734306 | + | 333 | WP_181825274.1 | hypothetical protein | - |
| HVX63_RS03630 () | 734455..734712 | + | 258 | WP_181825275.1 | hypothetical protein | - |
| HVX63_RS03635 () | 735269..735751 | + | 483 | WP_181825276.1 | ImmA/IrrE family metallo-endopeptidase | - |
| HVX63_RS03640 () | 735815..736534 | + | 720 | WP_181825451.1 | hypothetical protein | - |
| HVX63_RS03645 () | 736923..738239 | + | 1317 | WP_112035150.1 | Prophage integrase IntA ; Integrase | Integrase |
| HVX63_RS03650 () | 738244..738858 | + | 615 | WP_181825277.1 | Fic family protein | - |
| HVX63_RS03655 () | 738855..739013 | - | 159 | WP_105608933.1 | hypothetical protein | - |
| HVX63_RS03660 () | 739152..740015 | + | 864 | WP_181825419.1 | hypothetical protein | - |
| HVX63_RS03665 () | 740565..740801 | + | 237 | WP_015063060.1 | AlpA family phage regulatory protein | - |
| HVX63_RS03670 () | 740936..742357 | + | 1422 | WP_181825278.1 | DUF3987 domain-containing protein | - |
| HVX63_RS03675 () | 742483..743109 | + | 627 | WP_015063058.1 | inovirus Gp2 family protein | - |
| HVX63_RS03680 () | 743465..744538 | - | 1074 | WP_181825279.1 | SAVED domain-containing protein | - |
| HVX63_RS03685 () | 744542..745012 | - | 471 | WP_181825280.1 | Mov34/MPN/PAD-1 family protein | - |
| HVX63_RS03690 () | 745005..746741 | - | 1737 | WP_181825281.1 | ThiF family adenylyltransferase | - |
| HVX63_RS03695 () | 746738..747808 | - | 1071 | WP_181825282.1 | nucleotidyltransferase | - |
| HVX63_RS03700 () | 748217..749080 | + | 864 | WP_181825283.1 | GTPase family protein | - |
| HVX63_RS03705 () | 749172..749993 | + | 822 | WP_130954727.1 | DUF945 domain-containing protein | - |
| HVX63_RS03710 () | 750210..750911 | + | 702 | WP_134769024.1 | WYL domain-containing protein | - |
| HVX63_RS03715 () | 750948..751184 | + | 237 | WP_134769025.1 | hypothetical protein | - |
| HVX63_RS03720 () | 751184..751627 | + | 444 | WP_105547579.1 | hypothetical protein | - |
| HVX63_RS03725 () | 751651..752097 | + | 447 | WP_181825284.1 | hypothetical protein | - |
| HVX63_RS03730 () | 752099..753067 | + | 969 | WP_181825212.1 | IS5 family transposase IS903B | Transposase |
| HVX63_RS03735 () | 753174..753428 | - | 255 | Protein_733 | transposase | - |
| HVX63_RS03740 () | 753491..753757 | + | 267 | Protein_734 | IS3 family transposase IS3H | Transposase |
| HVX63_RS03745 () | 753815..754512 | + | 698 | Protein_735 | IS1 family transposase | - |
| HVX63_RS03750 () | 754880..755280 | + | 401 | Protein_736 | IS5 family transposase ISMpo8 | Transposase |
| HVX63_RS03755 () | 755316..755669 | + | 354 | WP_064175111.1 | VOC family protein | - |
| HVX63_RS03760 () | 755701..756327 | - | 627 | WP_064188136.1 | LysE family translocator | - |
| HVX63_RS03765 () | 757022..757192 | + | 171 | WP_077268691.1 | MarR family transcriptional regulator | - |
| HVX63_RS03770 () | 757315..757935 | + | 621 | WP_117064107.1 | hypothetical protein | - |
| HVX63_RS03775 () | 758125..758652 | + | 528 | WP_181825420.1 | ATP-binding protein | - |
| HVX63_RS03780 () | 758715..759551 | + | 837 | WP_117064111.1 | MOSC domain-containing protein | - |
| HVX63_RS03785 () | 759779..760636 | - | 858 | WP_181825421.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|