MGE detailed information
MGE type: Prophage MGE length: 120716 bp
Accession: NZ_CP057620 Location: 2607228..2727943 Organism: Citrobacter sp. RHB21-C01 Replicon: chromosome
Accession: NZ_CP057620 Location: 2607228..2727943 Organism: Citrobacter sp. RHB21-C01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVX68_RS12515 () | 2602956..2603414 | + | 459 | WP_181821470.1 | DUF986 family protein | - |
| HVX68_RS12520 () | 2603827..2604393 | + | 567 | WP_181821471.1 | manganese efflux pump MntP | - |
| HVX68_RS12525 () | 2604390..2605199 | - | 810 | WP_060569599.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HVX68_RS12530 () | 2605263..2607008 | - | 1746 | WP_181821472.1 | peptidoglycan glycosyltransferase FtsI | - |
| HVX68_RS12535 () | 2607228..2607437 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HVX68_RS12540 () | 2607477..2607593 | - | 117 | WP_042287799.1 | YobF family protein | - |
| HVX68_RS12545 () | 2608249..2608536 | - | 288 | WP_042287801.1 | YebO family protein | - |
| HVX68_RS12550 () | 2608611..2608754 | - | 144 | WP_181821473.1 | PhoP/PhoQ regulator MgrB | - |
| HVX68_RS12555 () | 2608913..2609152 | + | 240 | WP_181821474.1 | hypothetical protein | - |
| HVX68_RS12560 () | 2609264..2610055 | - | 792 | WP_042287810.1 | DNA-binding transcriptional regulator KdgR | - |
| HVX68_RS12565 () | 2610232..2611605 | + | 1374 | WP_042287812.1 | MFS transporter | - |
| HVX68_RS12570 () | 2611683..2612564 | - | 882 | WP_042287815.1 | protease HtpX | - |
| HVX68_RS12575 () | 2612757..2614805 | - | 2049 | WP_181821475.1 | carboxy terminal-processing peptidase | - |
| HVX68_RS12580 () | 2614825..2615511 | - | 687 | WP_181821476.1 | RNA chaperone ProQ | - |
| HVX68_RS12585 () | 2615609..2616106 | - | 498 | WP_181821477.1 | GAF domain-containing protein | - |
| HVX68_RS12590 () | 2616235..2617518 | + | 1284 | WP_042287824.1 | membrane integrity lipid transport subunit YebS | - |
| HVX68_RS12595 () | 2617487..2620120 | + | 2634 | WP_181821478.1 | hypothetical protein | VF |
| HVX68_RS12600 () | 2620199..2621647 | + | 1449 | WP_072014989.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HVX68_RS12605 () | 2621753..2621989 | + | 237 | WP_167333858.1 | DUF1480 family protein | - |
| HVX68_RS12610 () | 2622092..2622283 | + | 192 | WP_042287832.1 | YebW family protein | - |
| HVX68_RS12615 () | 2622355..2623623 | - | 1269 | WP_181821479.1 | type 1 fimbrial protein | - |
| HVX68_RS12620 () | 2623661..2626210 | - | 2550 | WP_181821480.1 | hypothetical protein | VF |
| HVX68_RS12625 () | 2626253..2626948 | - | 696 | WP_181823275.1 | hypothetical protein | VF |
| HVX68_RS12630 () | 2627026..2627577 | - | 552 | WP_042288202.1 | hypothetical protein | VF |
| HVX68_RS12635 () | 2628586..2629239 | + | 654 | WP_181821481.1 | hypothetical protein | VF |
| HVX68_RS12640 () | 2629782..2630453 | + | 672 | WP_181821482.1 | SOS response-associated peptidase | - |
| HVX68_RS12645 () | 2630446..2631714 | - | 1269 | WP_181823276.1 | Y-family DNA polymerase | - |
| HVX68_RS12650 () | 2631862..2632101 | + | 240 | WP_181821483.1 | DinI family protein | - |
| HVX68_RS12655 () | 2632249..2632776 | + | 528 | WP_181821484.1 | hypothetical protein | - |
| HVX68_RS12660 () | 2633264..2633731 | - | 468 | Protein_2468 | phage tail protein | - |
| HVX68_RS12665 () | 2635457..2635840 | - | 384 | Protein_2469 | phage tail protein | - |
| HVX68_RS12670 () | 2635904..2636530 | - | 627 | WP_181821485.1 | hypothetical protein | - |
| HVX68_RS12675 () | 2636530..2636802 | - | 273 | WP_181821486.1 | hypothetical protein | - |
| HVX68_RS12680 () | 2637048..2640218 | - | 3171 | WP_181821487.1 | host specificity protein J | - |
| HVX68_RS12685 () | 2640270..2640875 | - | 606 | WP_181821488.1 | tail assembly protein | - |
| HVX68_RS12690 () | 2640908..2641618 | - | 711 | WP_181821489.1 | C40 family peptidase | - |
| HVX68_RS12695 () | 2641620..2642375 | - | 756 | WP_181821490.1 | phage minor tail protein L | - |
| HVX68_RS12700 () | 2642372..2642719 | - | 348 | WP_095440551.1 | phage tail protein | - |
| HVX68_RS12705 () | 2642775..2643212 | - | 438 | WP_181821491.1 | hypothetical protein | - |
| HVX68_RS12710 () | 2643290..2646205 | - | 2916 | WP_181821492.1 | phage tail tape measure protein | - |
| HVX68_RS12715 () | 2646202..2646516 | - | 315 | WP_181823277.1 | DUF1799 domain-containing protein | - |
| HVX68_RS12720 () | 2646513..2646824 | - | 312 | WP_181821493.1 | hypothetical protein | - |
| HVX68_RS12725 () | 2646867..2647802 | - | 936 | WP_181821494.1 | Ig-like domain-containing protein | - |
| HVX68_RS12730 () | 2647860..2648270 | - | 411 | WP_181821495.1 | DUF4128 domain-containing protein | - |
| HVX68_RS12735 () | 2648267..2648851 | - | 585 | WP_181821496.1 | hypothetical protein | - |
| HVX68_RS12740 () | 2648853..2649203 | - | 351 | WP_181821497.1 | hypothetical protein | - |
| HVX68_RS12745 () | 2649205..2649687 | - | 483 | WP_181821498.1 | hypothetical protein | - |
| HVX68_RS12750 () | 2649724..2650023 | - | 300 | WP_181823278.1 | Ig-like domain-containing protein | - |
| HVX68_RS12755 () | 2650005..2650958 | - | 954 | WP_045135241.1 | Ig domain-containing protein | - |
| HVX68_RS12760 () | 2650971..2651741 | - | 771 | WP_181821499.1 | hypothetical protein | - |
| HVX68_RS12765 () | 2651823..2652008 | - | 186 | WP_048228552.1 | hypothetical protein | - |
| HVX68_RS12770 () | 2652632..2653708 | - | 1077 | Protein_2490 | hypothetical protein | - |
| HVX68_RS12775 () | 2653710..2655098 | - | 1389 | WP_181821500.1 | DUF4055 domain-containing protein | - |
| HVX68_RS12780 () | 2655100..2656407 | - | 1308 | WP_181821501.1 | terminase family protein | - |
| HVX68_RS12785 () | 2656385..2657365 | - | 981 | WP_181821502.1 | terminase small subunit | - |
| HVX68_RS12790 () | 2657443..2657913 | + | 471 | WP_139267361.1 | hypothetical protein | - |
| HVX68_RS12795 () | 2658028..2658234 | + | 207 | WP_042291595.1 | HEAT repeat domain-containing protein | - |
| HVX68_RS12800 () | 2658330..2658689 | - | 360 | WP_071258647.1 | hypothetical protein | - |
| HVX68_RS12805 () | 2658905..2659174 | - | 270 | WP_071258649.1 | hypothetical protein | - |
| HVX68_RS12810 () | 2659182..2659811 | - | 630 | WP_104868777.1 | glycoside hydrolase family 19 protein | - |
| HVX68_RS12815 () | 2659968..2660249 | - | 282 | WP_181821503.1 | phage holin family protein | - |
| HVX68_RS12820 () | 2660236..2660631 | - | 396 | WP_042291608.1 | phage holin family protein | - |
| HVX68_RS12835 () | 2661707..2663047 | + | 1341 | WP_181821504.1 | ISNCY family transposase ISCARN112 | Transposase |
| HVX68_RS12840 () | 2663484..2663816 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| HVX68_RS12845 () | 2664019..2664324 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| HVX68_RS12850 () | 2664349..2664588 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HVX68_RS12855 () | 2664588..2664875 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HVX68_RS12860 () | 2664974..2665783 | - | 810 | WP_181821505.1 | antitermination protein | - |
| HVX68_RS12865 () | 2665783..2665920 | - | 138 | WP_181821506.1 | YlcG family protein | - |
| HVX68_RS12870 () | 2665917..2666273 | - | 357 | WP_181821507.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVX68_RS12875 () | 2666270..2666551 | - | 282 | WP_181821508.1 | hypothetical protein | - |
| HVX68_RS12880 () | 2666751..2667356 | - | 606 | WP_181821509.1 | DUF1367 family protein | - |
| HVX68_RS12885 () | 2667441..2667662 | - | 222 | WP_181821510.1 | hypothetical protein | - |
| HVX68_RS12890 () | 2667772..2668005 | - | 234 | WP_181821511.1 | DinI-like family protein | - |
| HVX68_RS12895 () | 2669151..2670170 | - | 1020 | WP_181821512.1 | ParA family protein | - |
| HVX68_RS12900 () | 2670402..2670719 | - | 318 | WP_181821513.1 | hypothetical protein | - |
| HVX68_RS12905 () | 2670716..2671063 | - | 348 | WP_181821514.1 | ead/Ea22-like family protein | - |
| HVX68_RS12910 () | 2671060..2671908 | - | 849 | WP_181821515.1 | DNA adenine methylase | - |
| HVX68_RS12915 () | 2671905..2672237 | - | 333 | WP_181821516.1 | DUF977 family protein | - |
| HVX68_RS12920 () | 2672241..2672927 | - | 687 | WP_181821517.1 | hypothetical protein | - |
| HVX68_RS12925 () | 2672939..2673625 | - | 687 | WP_181821518.1 | phage replication protein | - |
| HVX68_RS12930 () | 2673622..2674548 | - | 927 | WP_042291650.1 | replication protein | - |
| HVX68_RS12935 () | 2674623..2674877 | - | 255 | WP_181823314.1 | hypothetical protein | - |
| HVX68_RS12940 () | 2674887..2675429 | - | 543 | WP_181821519.1 | toxin YdaT domain-containing protein | - |
| HVX68_RS12945 () | 2675432..2675662 | - | 231 | WP_048986204.1 | hypothetical protein | - |
| HVX68_RS12950 () | 2675783..2676196 | + | 414 | WP_181821520.1 | helix-turn-helix domain-containing protein | - |
| HVX68_RS12955 () | 2676729..2676887 | + | 159 | WP_181821521.1 | hypothetical protein | - |
| HVX68_RS12960 () | 2676962..2677249 | + | 288 | WP_181821522.1 | DNA breaking-rejoining protein | - |
| HVX68_RS12965 () | 2677376..2680264 | + | 2889 | WP_181821523.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HVX68_RS12970 () | 2680275..2681357 | + | 1083 | WP_181821524.1 | recombinase RecT | - |
| HVX68_RS12975 () | 2681401..2681640 | + | 240 | WP_181821525.1 | DUF4060 family protein | - |
| HVX68_RS12980 () | 2681705..2681977 | + | 273 | WP_181821526.1 | excisionase | - |
| HVX68_RS12985 () | 2681946..2683031 | + | 1086 | WP_181821527.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2683103..2683247 | + | 145 | - | - | Antitoxin Detail |
| - () | 2683109..2683212 | - | 104 | - | - | Toxin Detail |
| HVX68_RS12990 () | 2683368..2683706 | - | 339 | WP_060569589.1 | YebY family protein | - |
| HVX68_RS12995 () | 2683723..2684595 | - | 873 | WP_181821528.1 | copper homeostasis membrane protein CopD | - |
| HVX68_RS13000 () | 2684598..2684960 | - | 363 | WP_042287846.1 | CopC domain-containing protein YobA | - |
| HVX68_RS13005 () | 2685098..2685328 | + | 231 | WP_042287849.1 | DNA polymerase III subunit theta | - |
| HVX68_RS13010 () | 2685437..2686093 | + | 657 | WP_042287851.1 | carbon-nitrogen hydrolase family protein | - |
| HVX68_RS13015 () | 2686117..2686779 | + | 663 | WP_042287853.1 | exodeoxyribonuclease X | - |
| HVX68_RS13020 () | 2686776..2688836 | - | 2061 | WP_042287855.1 | oligopeptidase B | - |
| HVX68_RS13025 () | 2688920..2689585 | - | 666 | WP_042287858.1 | tellurite resistance TerB family protein | - |
| HVX68_RS13030 () | 2689681..2690031 | - | 351 | WP_181821529.1 | protein YebF | - |
| HVX68_RS13035 () | 2690104..2690385 | - | 282 | WP_042287862.1 | DNA damage-inducible protein YebG | - |
| HVX68_RS13040 () | 2690517..2691695 | + | 1179 | WP_181821530.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HVX68_RS13045 () | 2691750..2692391 | - | 642 | WP_042287867.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HVX68_RS13050 () | 2692427..2694238 | - | 1812 | WP_181821531.1 | phosphogluconate dehydratase | - |
| HVX68_RS13055 () | 2694473..2695948 | - | 1476 | WP_060569584.1 | glucose-6-phosphate dehydrogenase | - |
| HVX68_RS13060 () | 2696299..2697168 | + | 870 | WP_042287873.1 | MurR/RpiR family transcriptional regulator | - |
| HVX68_RS13065 () | 2697293..2698735 | + | 1443 | WP_042287875.1 | pyruvate kinase | - |
| HVX68_RS13070 () | 2698842..2699813 | - | 972 | WP_042287878.1 | hypothetical protein | VF |
| HVX68_RS13075 () | 2699934..2701256 | - | 1323 | WP_042287880.1 | murein DD-endopeptidase MepM | - |
| HVX68_RS13080 () | 2701272..2702216 | - | 945 | WP_042288205.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HVX68_RS13085 () | 2702295..2703050 | + | 756 | WP_042287883.1 | hypothetical protein | VF |
| HVX68_RS13090 () | 2703047..2703832 | + | 786 | WP_042287886.1 | hypothetical protein | VF |
| HVX68_RS13095 () | 2703901..2704689 | - | 789 | WP_042287889.1 | phosphate starvation-inducible protein PhoH | - |
| HVX68_RS13100 () | 2705203..2706486 | - | 1284 | WP_181821532.1 | deferrochelatase/peroxidase EfeB | - |
| HVX68_RS13105 () | 2706492..2707619 | - | 1128 | WP_181821533.1 | iron uptake system protein EfeO | - |
| HVX68_RS13110 () | 2707673..2708506 | - | 834 | WP_181821534.1 | FTR1 family protein | - |
| HVX68_RS13115 () | 2708760..2710268 | - | 1509 | WP_042287900.1 | sodium/proline symporter PutP | - |
| HVX68_RS13120 () | 2710666..2714628 | + | 3963 | WP_181821535.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| HVX68_RS13125 () | 2714730..2715125 | + | 396 | WP_060569578.1 | lysozyme inhibitor LprI family protein | - |
| HVX68_RS13130 () | 2715122..2715760 | - | 639 | WP_181821536.1 | hypothetical protein | VF |
| HVX68_RS13135 () | 2715963..2716136 | - | 174 | WP_042287910.1 | general stress protein | - |
| HVX68_RS13140 () | 2716519..2717115 | + | 597 | WP_042287913.1 | NAD(P)H:quinone oxidoreductase | - |
| HVX68_RS13145 () | 2717136..2717363 | + | 228 | WP_042287915.1 | YccJ family protein | - |
| HVX68_RS13150 () | 2717398..2718639 | - | 1242 | WP_181821537.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| HVX68_RS13155 () | 2718966..2719475 | - | 510 | WP_181821538.1 | protein disulfide oxidoreductase | - |
| HVX68_RS13160 () | 2719465..2720088 | - | 624 | WP_181821539.1 | DsbA family protein | - |
| HVX68_RS13165 () | 2720085..2721965 | - | 1881 | WP_181821540.1 | thioredoxin family protein | - |
| HVX68_RS13170 () | 2722014..2722379 | - | 366 | WP_181823279.1 | copper resistance protein | - |
| HVX68_RS13175 () | 2722561..2723481 | + | 921 | WP_181821541.1 | curved DNA-binding protein | - |
| HVX68_RS13180 () | 2723481..2723786 | + | 306 | WP_042287937.1 | chaperone modulator CbpM | - |
| HVX68_RS13185 () | 2723904..2724983 | + | 1080 | WP_181821542.1 | 4Fe-4S binding protein | - |
| HVX68_RS13190 () | 2725022..2726137 | - | 1116 | WP_181821543.1 | AI-2E family transporter | - |
| HVX68_RS13195 () | 2726706..2727062 | + | 357 | WP_042287946.1 | anti-adapter protein IraM | - |
| HVX68_RS13200 () | 2727446..2727943 | - | 498 | WP_181821544.1 | GNAT family N-acetyltransferase | - |
| HVX68_RS13205 () | 2727959..2728873 | - | 915 | WP_181821545.1 | hypothetical protein | - |
| HVX68_RS13210 () | 2728960..2729580 | - | 621 | WP_042287957.1 | Crp/Fnr family transcriptional regulator | - |
| HVX68_RS13215 () | 2729807..2730118 | + | 312 | Protein_2577 | integrase | - |
| HVX68_RS13225 () | 2730324..2730554 | - | 231 | WP_060569566.1 | hypothetical protein | - |
| HVX68_RS13230 () | 2730587..2731246 | + | 660 | WP_012905355.1 | FtsH protease modulator YccA | - |
| HVX68_RS13235 () | 2731296..2731778 | - | 483 | WP_181821546.1 | hypothetical protein | - |
| HVX68_RS13240 () | 2731775..2732536 | - | 762 | WP_042287964.1 | winged helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|