MGE detailed information
MGE type: Prophage MGE length: 45633 bp
Accession: NZ_CP057215 Location: 2751624..2797256 Organism: Escherichia fergusonii strain RHB33-C04 Replicon: chromosome
Accession: NZ_CP057215 Location: 2751624..2797256 Organism: Escherichia fergusonii strain RHB33-C04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVZ08_RS13240 () | 2747939..2749396 | + | 1458 | WP_181666546.1 | TrkH family potassium uptake protein | - |
| HVZ08_RS13245 () | 2749505..2750356 | + | 852 | WP_000218044.1 | protein deglycase HchA | - |
| HVZ08_RS13250 () | 2751624..2752205 | - | 582 | WP_000885571.1 | tail fiber assembly protein | - |
| HVZ08_RS13255 () | 2752205..2755168 | - | 2964 | WP_181666547.1 | phage tail protein | - |
| HVZ08_RS13260 () | 2755233..2755832 | - | 600 | WP_001233158.1 | Outer membrane protein X | VF |
| HVZ08_RS13265 () | 2755900..2759295 | - | 3396 | WP_137485418.1 | host specificity protein J | - |
| HVZ08_RS13270 () | 2759356..2759958 | - | 603 | WP_000090949.1 | tail assembly protein | - |
| HVZ08_RS13275 () | 2759895..2760638 | - | 744 | WP_032241748.1 | C40 family peptidase | - |
| HVZ08_RS13280 () | 2760643..2761341 | - | 699 | WP_001152459.1 | phage minor tail protein L | - |
| HVZ08_RS13285 () | 2761341..2761697 | - | 357 | WP_001330090.1 | phage tail protein | - |
| HVZ08_RS13290 () | 2761675..2764902 | - | 3228 | WP_181666548.1 | phage tail tape measure protein | - |
| HVZ08_RS13295 () | 2764949..2765227 | - | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| HVZ08_RS13300 () | 2765251..2765622 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| HVZ08_RS13305 () | 2765637..2766341 | - | 705 | WP_000097533.1 | hypothetical protein | - |
| HVZ08_RS13310 () | 2766401..2766745 | - | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| HVZ08_RS13315 () | 2766742..2767188 | - | 447 | WP_000347790.1 | HK97 gp10 family phage protein | - |
| HVZ08_RS13320 () | 2767188..2767526 | - | 339 | WP_001147820.1 | phage head closure protein | - |
| HVZ08_RS13325 () | 2767535..2767840 | - | 306 | WP_000983037.1 | head-tail connector protein | - |
| HVZ08_RS13330 () | 2767852..2768040 | - | 189 | WP_000601355.1 | hypothetical protein | - |
| HVZ08_RS13335 () | 2768091..2769296 | - | 1206 | WP_000257522.1 | phage major capsid protein | - |
| HVZ08_RS13340 () | 2769311..2769961 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| HVZ08_RS13345 () | 2769939..2771180 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| HVZ08_RS13350 () | 2771180..2771362 | - | 183 | WP_000478564.1 | hypothetical protein | - |
| HVZ08_RS13355 () | 2771374..2773131 | - | 1758 | WP_001140903.1 | terminase large subunit | - |
| HVZ08_RS13360 () | 2773131..2773613 | - | 483 | WP_001312917.1 | phage terminase small subunit P27 family | - |
| HVZ08_RS13365 () | 2773761..2774111 | - | 351 | WP_001140099.1 | HNH endonuclease | - |
| HVZ08_RS13370 () | 2774216..2774401 | - | 186 | WP_001228684.1 | Rz1 family lipoprotein | - |
| HVZ08_RS13375 () | 2774618..2775151 | - | 534 | WP_064154082.1 | lysozyme | - |
| HVZ08_RS13380 () | 2775215..2775565 | - | 351 | WP_001545374.1 | YdfR family protein | - |
| HVZ08_RS13385 () | 2775676..2776844 | + | 1169 | WP_181666549.1 | IS3 family transposase ISLad1 | Transposase |
| HVZ08_RS13390 () | 2776819..2777037 | - | 219 | WP_181666550.1 | class II holin family protein | - |
| HVZ08_RS13415 () | 2777834..2778523 | - | 690 | WP_096215950.1 | antiterminator | - |
| HVZ08_RS13420 () | 2778520..2778885 | - | 366 | WP_000139994.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVZ08_RS13425 () | 2778886..2779941 | - | 1056 | WP_181666551.1 | DUF968 domain-containing protein | - |
| HVZ08_RS13430 () | 2779943..2780221 | - | 279 | WP_097419052.1 | hypothetical protein | - |
| HVZ08_RS13435 () | 2780337..2780822 | - | 486 | WP_000818167.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HVZ08_RS13440 () | 2780841..2781020 | - | 180 | WP_001277774.1 | hypothetical protein | - |
| HVZ08_RS13445 () | 2781236..2781391 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2781403..2781461 | + | 59 | - | - | Antitoxin Detail |
| HVZ08_RS13450 () | 2781968..2782876 | + | 909 | WP_001297700.1 | bacteriophage abortive infection AbiH family protein | - |
| HVZ08_RS13455 () | 2782966..2784357 | + | 1392 | WP_181666552.1 | hypothetical protein | - |
| HVZ08_RS13460 () | 2784620..2785042 | - | 423 | WP_162522223.1 | DUF977 family protein | - |
| HVZ08_RS13465 () | 2785083..2786153 | - | 1071 | WP_001262357.1 | hypothetical protein | - |
| HVZ08_RS13470 () | 2786225..2786650 | - | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| HVZ08_RS13475 () | 2786647..2786862 | - | 216 | WP_060615121.1 | transcriptional regulator | - |
| HVZ08_RS13480 () | 2786912..2787628 | + | 717 | WP_001394126.1 | helix-turn-helix domain-containing protein | - |
| HVZ08_RS13485 () | 2787901..2788056 | + | 156 | WP_053881715.1 | DUF1391 family protein | - |
| HVZ08_RS13490 () | 2788216..2788434 | + | 219 | WP_001171946.1 | hypothetical protein | - |
| HVZ08_RS13495 () | 2789002..2789190 | + | 189 | WP_000854558.1 | cell division inhibition protein DicB | - |
| HVZ08_RS13500 () | 2789187..2789378 | + | 192 | WP_181666553.1 | DUF1482 family protein | - |
| HVZ08_RS13505 () | 2789472..2791307 | + | 1836 | Protein_2631 | exonuclease | - |
| HVZ08_RS13510 () | 2791371..2791914 | + | 544 | Protein_2632 | 3'-5' exoribonuclease | - |
| HVZ08_RS13515 () | 2791973..2792176 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| HVZ08_RS13520 () | 2792176..2793201 | + | 1026 | WP_000533615.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HVZ08_RS13530 () | 2793437..2794234 | + | 798 | WP_046077351.1 | DgsA anti-repressor MtfA | - |
| HVZ08_RS13540 () | 2794449..2795399 | - | 951 | WP_001010985.1 | HTH-type transcriptional regulator Cbl | - |
| HVZ08_RS13545 () | 2795501..2796418 | - | 918 | WP_001011449.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HVZ08_RS13555 () | 2796987..2797184 | + | 198 | Protein_2638 | DUF4102 domain-containing protein | - |
| HVZ08_RS13560 () | 2797463..2797606 | - | 144 | WP_167315501.1 | hypothetical protein | - |
| HVZ08_RS13565 () | 2797861..2798181 | - | 321 | WP_000998326.1 | hypothetical protein | - |
| HVZ08_RS13570 () | 2798193..2798519 | - | 327 | WP_181670216.1 | hypothetical protein | - |
| HVZ08_RS13575 () | 2799064..2799435 | - | 372 | WP_181590493.1 | hypothetical protein | - |
| HVZ08_RS13580 () | 2799440..2799889 | - | 450 | WP_046077359.1 | DUF1311 domain-containing protein | - |
| HVZ08_RS13585 () | 2799889..2800560 | - | 672 | WP_181667467.1 | hypothetical protein | - |
| HVZ08_RS13590 () | 2800801..2801280 | - | 480 | WP_001284966.1 | Hcp family type VI secretion system effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|