MGE detailed information
MGE type: Prophage MGE length: 47994 bp
Accession: NZ_CP057093 Location: 1912476..1960469 Organism: Escherichia fergusonii strain RHB38-C07 Replicon: chromosome
Accession: NZ_CP057093 Location: 1912476..1960469 Organism: Escherichia fergusonii strain RHB38-C07 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVZ69_RS09315 () | 1907970..1908488 | - | 519 | WP_001217010.1 | hypothetical protein | - |
| HVZ69_RS09320 () | 1908488..1909306 | - | 819 | WP_046080813.1 | winged helix-turn-helix domain-containing protein | - |
| HVZ69_RS09325 () | 1909329..1909907 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| HVZ69_RS09335 () | 1910489..1911925 | + | 1437 | Protein_1815 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| HVZ69_RS09345 () | 1912476..1913780 | + | 1305 | WP_000378537.1 | shikimate transporter | - |
| HVZ69_RS09350 () | 1913908..1915362 | + | 1455 | WP_181588670.1 | AMP nucleosidase | - |
| HVZ69_RS09355 () | 1915462..1916560 | - | 1099 | Protein_1818 | ISAs1 family transposase ISEc1 | Transposase |
| HVZ69_RS09365 () | 1917803..1917952 | - | 150 | Protein_1820 | DUF4102 domain-containing protein | - |
| HVZ69_RS09375 () | 1918521..1919438 | + | 918 | WP_001011449.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HVZ69_RS09380 () | 1919540..1920490 | + | 951 | WP_181588672.1 | HTH-type transcriptional regulator Cbl | - |
| HVZ69_RS09390 () | 1920705..1921502 | - | 798 | WP_000598929.1 | DgsA anti-repressor MtfA | - |
| HVZ69_RS09400 () | 1921738..1922763 | - | 1026 | WP_000533617.1 | Regulator of sigma S factor FliZ ; Integrase | Integrase |
| HVZ69_RS09405 () | 1922763..1922966 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| HVZ69_RS09410 () | 1923025..1925499 | - | 2475 | WP_181598226.1 | exonuclease | - |
| HVZ69_RS09415 () | 1925592..1925783 | - | 192 | WP_001090188.1 | DUF1482 family protein | - |
| HVZ69_RS09420 () | 1925780..1925968 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| HVZ69_RS09425 () | 1926531..1926752 | + | 222 | WP_000202161.1 | hypothetical protein | - |
| HVZ69_RS09430 () | 1926742..1927116 | - | 375 | WP_094338612.1 | hypothetical protein | - |
| HVZ69_RS09435 () | 1927139..1927357 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| HVZ69_RS09440 () | 1927429..1927728 | - | 300 | WP_050582285.1 | hypothetical protein | - |
| HVZ69_RS09445 () | 1928067..1928711 | - | 645 | WP_000444613.1 | LexA family transcriptional regulator | - |
| HVZ69_RS09450 () | 1928811..1929038 | + | 228 | WP_001261754.1 | cell division control protein | - |
| HVZ69_RS09455 () | 1929035..1929460 | + | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| HVZ69_RS09460 () | 1929532..1930602 | + | 1071 | WP_023154928.1 | phage replisome organizer protein | - |
| HVZ69_RS09465 () | 1930643..1931068 | + | 426 | WP_021546098.1 | DUF977 family protein | - |
| HVZ69_RS09470 () | 1931243..1931908 | + | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| - () | 1932076..1932134 | - | 59 | - | - | Antitoxin Detail |
| HVZ69_RS09475 () | 1932146..1932301 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| HVZ69_RS09480 () | 1932445..1932837 | + | 393 | WP_000737636.1 | hypothetical protein | - |
| HVZ69_RS09485 () | 1933134..1933412 | + | 279 | WP_113488262.1 | hypothetical protein | - |
| HVZ69_RS09490 () | 1933414..1934469 | + | 1056 | WP_181598227.1 | DUF968 domain-containing protein | - |
| HVZ69_RS09495 () | 1934470..1934835 | + | 366 | WP_000139992.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVZ69_RS09500 () | 1934832..1935521 | + | 690 | WP_001064896.1 | antiterminator | - |
| HVZ69_RS09525 () | 1936318..1936533 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| HVZ69_RS09530 () | 1936538..1936888 | + | 351 | WP_001545374.1 | YdfR family protein | - |
| HVZ69_RS09535 () | 1936952..1937485 | + | 534 | WP_000992100.1 | lysozyme | - |
| HVZ69_RS09540 () | 1937702..1937887 | + | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| HVZ69_RS09545 () | 1938105..1938371 | + | 267 | WP_001100260.1 | hypothetical protein | - |
| HVZ69_RS09550 () | 1938377..1938916 | - | 540 | WP_113966962.1 | YfbU family protein | - |
| HVZ69_RS09555 () | 1939055..1939405 | + | 351 | WP_001532429.1 | HNH endonuclease | - |
| HVZ69_RS09560 () | 1939553..1940035 | + | 483 | WP_001312917.1 | phage terminase small subunit P27 family | - |
| HVZ69_RS09565 () | 1940035..1941792 | + | 1758 | WP_001140903.1 | terminase large subunit | - |
| HVZ69_RS09570 () | 1941804..1941986 | + | 183 | WP_000478567.1 | hypothetical protein | - |
| HVZ69_RS09575 () | 1941986..1943227 | + | 1242 | WP_181598228.1 | phage portal protein | - |
| HVZ69_RS09580 () | 1943205..1943855 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| HVZ69_RS09585 () | 1943870..1945075 | + | 1206 | WP_021562582.1 | phage major capsid protein | - |
| HVZ69_RS09590 () | 1945127..1945315 | + | 189 | WP_000601355.1 | hypothetical protein | - |
| HVZ69_RS09595 () | 1945327..1945632 | + | 306 | WP_000983037.1 | head-tail connector protein | - |
| HVZ69_RS09600 () | 1945641..1945979 | + | 339 | WP_001147820.1 | phage head closure protein | - |
| HVZ69_RS09605 () | 1945979..1946425 | + | 447 | WP_000347790.1 | HK97 gp10 family phage protein | - |
| HVZ69_RS09610 () | 1946422..1946766 | + | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| HVZ69_RS09615 () | 1946827..1947531 | + | 705 | WP_181598229.1 | phage tail protein | - |
| HVZ69_RS09620 () | 1947546..1947917 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| HVZ69_RS09625 () | 1947941..1948219 | + | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| HVZ69_RS09630 () | 1948266..1951505 | + | 3240 | WP_181598230.1 | phage tail tape measure protein | - |
| HVZ69_RS09635 () | 1951498..1951839 | + | 342 | WP_001114907.1 | phage tail protein | - |
| HVZ69_RS09640 () | 1951839..1952537 | + | 699 | WP_016231752.1 | phage minor tail protein L | - |
| HVZ69_RS09645 () | 1952543..1953286 | + | 744 | WP_181598231.1 | C40 family peptidase | - |
| HVZ69_RS09650 () | 1953184..1953831 | + | 648 | WP_089639668.1 | tail assembly protein | - |
| HVZ69_RS09655 () | 1953892..1957380 | + | 3489 | WP_181598232.1 | host specificity protein J | - |
| HVZ69_RS09660 () | 1957448..1958047 | + | 600 | WP_001233185.1 | Inner membrane protein YecN | VF |
| HVZ69_RS09665 () | 1958112..1960469 | + | 2358 | WP_181598223.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HVZ69_RS09670 () | 1960469..1960738 | + | 270 | WP_001204892.1 | hypothetical protein | - |
| HVZ69_RS09675 () | 1960751..1961791 | + | 1041 | WP_181598233.1 | tail fiber domain-containing protein | - |
| HVZ69_RS09680 () | 1961834..1962121 | + | 288 | WP_181598234.1 | hypothetical protein | - |
| HVZ69_RS09685 () | 1962876..1963727 | - | 852 | WP_181588673.1 | protein deglycase HchA | - |
| HVZ69_RS09690 () | 1963836..1965293 | - | 1458 | WP_002431477.1 | TrkH family potassium uptake protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|