MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98816 bp
Accession: NZ_CP056963 Location: 1..98816 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: plasmid pRHB41-C20_3
Accession: NZ_CP056963 Location: 1..98816 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: plasmid pRHB41-C20_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV012_RS23310 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| HV012_RS23315 () | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| HV012_RS23320 () | 2463..3428 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| HV012_RS23325 () | 3693..5399 | + | 1707 | WP_009446764.1 | hypothetical protein | - |
| HV012_RS23330 () | 5460..7049 | + | 1590 | WP_000085145.1 | hypothetical protein | - |
| HV012_RS23335 () | 7059..7874 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| HV012_RS23340 () | 7910..8491 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| HV012_RS23345 () | 8503..9012 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| HV012_RS23350 () | 9129..9284 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| HV012_RS23355 () | 9466..9711 | - | 246 | WP_001702262.1 | hypothetical protein | - |
| HV012_RS23360 () | 9762..10607 | - | 846 | WP_023154394.1 | hypothetical protein | - |
| HV012_RS23365 () | 10637..11437 | - | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| HV012_RS23370 () | 11602..12645 | - | 1044 | WP_000743162.1 | phage antirepressor Ant | - |
| HV012_RS23375 () | 12642..12863 | - | 222 | WP_000245708.1 | host cell division inhibitor Icd-like protein | - |
| HV012_RS23380 () | 13483..13995 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| HV012_RS23385 () | 13999..14538 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| HV012_RS23390 () | 14619..15185 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| HV012_RS23395 () | 15196..15807 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| HV012_RS23400 () | 15822..16703 | + | 882 | WP_000926346.1 | hypothetical protein | - |
| HV012_RS23405 () | 16785..20207 | + | 3423 | WP_112823856.1 | transglycosylase SLT domain-containing protein | - |
| HV012_RS23410 () | 20207..20563 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| HV012_RS23415 () | 20560..21993 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| HV012_RS23420 () | 21993..22829 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| HV012_RS23425 () | 22908..23342 | + | 435 | WP_001286328.1 | hypothetical protein | - |
| HV012_RS23430 () | 23354..25993 | + | 2640 | WP_181645799.1 | tail fiber protein | - |
| HV012_RS23435 () | 25996..26529 | + | 534 | WP_047630150.1 | tail fiber assembly protein | - |
| HV012_RS23440 () | 26558..27085 | - | 528 | WP_001164120.1 | tail fiber assembly protein | - |
| HV012_RS23445 () | 27089..28525 | - | 1437 | WP_089659781.1 | phage tail protein | - |
| HV012_RS23450 () | 28573..29133 | - | 561 | WP_097454727.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HV012_RS23455 () | 29261..29542 | + | 282 | WP_001615647.1 | hypothetical protein | - |
| HV012_RS23460 () | 29610..29939 | + | 330 | WP_000887652.1 | holin | - |
| HV012_RS23465 () | 29936..30379 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| HV012_RS23470 () | 30366..30968 | + | 603 | WP_047629434.1 | hypothetical protein | - |
| HV012_RS23475 () | 30970..32889 | + | 1920 | WP_181588893.1 | hypothetical protein | - |
| HV012_RS23480 () | 32886..33251 | + | 366 | WP_000175490.1 | hypothetical protein | - |
| HV012_RS23485 () | 33264..36251 | + | 2988 | WP_112020960.1 | hypothetical protein | - |
| HV012_RS23490 () | 36241..36549 | + | 309 | WP_001697775.1 | hypothetical protein | - |
| HV012_RS23495 () | 36948..38156 | - | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| HV012_RS23500 () | 38313..39863 | + | 1551 | WP_001189617.1 | multicopper oxidase CueO | - |
| HV012_RS23505 () | 40065..41342 | - | 1278 | Protein_39 | PQQ-binding-like beta-propeller repeat protein | - |
| HV012_RS23510 () | 41357..42565 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| HV012_RS23515 () | 43007..43795 | - | 789 | WP_001697797.1 | hypothetical protein | - |
| HV012_RS23520 () | 43802..44479 | - | 678 | WP_072649189.1 | DUF2829 domain-containing protein | - |
| HV012_RS23525 () | 44677..45165 | - | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| HV012_RS23530 () | 45335..45892 | + | 558 | WP_001345478.1 | lysozyme | - |
| HV012_RS23535 () | 46184..47203 | - | 1020 | WP_000132937.1 | head processing protein | - |
| HV012_RS23540 () | 47316..48446 | + | 1131 | WP_024199460.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| HV012_RS23545 () | 48479..50200 | - | 1722 | WP_181588896.1 | phage portal protein | - |
| HV012_RS23550 () | 50276..57043 | + | 6768 | WP_181588888.1 | N-6 DNA methylase | - |
| HV012_RS23555 () | 57077..57517 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| HV012_RS23560 () | 57514..57762 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| HV012_RS23565 () | 57802..58443 | - | 642 | WP_023352065.1 | hypothetical protein | - |
| HV012_RS23570 () | 58633..59193 | - | 561 | WP_094320458.1 | Ref family protein | - |
| HV012_RS23575 () | 59440..59751 | - | 312 | WP_001224236.1 | hypothetical protein | - |
| HV012_RS23580 () | 59802..60833 | - | 1032 | WP_052908434.1 | site-specific integrase | - |
| HV012_RS23585 () | 60841..61062 | - | 222 | WP_112823855.1 | creatininase | - |
| HV012_RS23590 () | 61666..61875 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| HV012_RS23595 () | 61986..62837 | + | 852 | WP_000611656.1 | hypothetical protein | - |
| HV012_RS23600 () | 62862..64346 | - | 1485 | WP_000124150.1 | terminase | - |
| HV012_RS23605 () | 64346..65539 | - | 1194 | WP_000219625.1 | hypothetical protein | - |
| HV012_RS23610 () | 65625..66077 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| HV012_RS23615 () | 66166..67209 | - | 1044 | WP_112075408.1 | DUF968 domain-containing protein | - |
| HV012_RS23620 () | 67237..67416 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| HV012_RS23625 () | 67421..67801 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HV012_RS23630 () | 67801..68022 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HV012_RS23635 () | 68095..68484 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| HV012_RS23640 () | 68659..69243 | + | 585 | WP_023356284.1 | hypothetical protein | - |
| HV012_RS23645 () | 69244..69606 | + | 363 | WP_042102765.1 | hypothetical protein | - |
| HV012_RS23650 () | 69618..69857 | - | 240 | WP_023356286.1 | DNA polymerase III subunit theta | - |
| HV012_RS23655 () | 69860..70060 | - | 201 | WP_032145427.1 | hypothetical protein | - |
| HV012_RS23660 () | 70172..70930 | - | 759 | WP_032353390.1 | hypothetical protein | - |
| HV012_RS23665 () | 70927..71163 | - | 237 | Protein_71 | hypothetical protein | - |
| HV012_RS23670 () | 71170..71867 | - | 698 | Protein_72 | IS1 family transposase | - |
| HV012_RS23675 () | 71892..72077 | - | 186 | Protein_73 | hypothetical protein | - |
| HV012_RS23680 () | 72084..72377 | - | 294 | WP_000269001.1 | hypothetical protein | - |
| HV012_RS23685 () | 72556..72789 | - | 234 | WP_000517421.1 | hypothetical protein | - |
| HV012_RS23690 () | 72872..73567 | - | 696 | WP_052896298.1 | DUF551 domain-containing protein | - |
| HV012_RS23695 () | 73564..74079 | - | 516 | WP_001229203.1 | hypothetical protein | - |
| HV012_RS23700 () | 74081..74269 | - | 189 | WP_047091814.1 | hypothetical protein | - |
| HV012_RS23705 () | 74266..74442 | - | 177 | WP_000797289.1 | hypothetical protein | - |
| HV012_RS23710 () | 74439..74615 | - | 177 | WP_001261538.1 | hypothetical protein | - |
| HV012_RS23715 () | 74615..75364 | - | 750 | WP_023356291.1 | ead/Ea22-like family protein | - |
| HV012_RS23720 () | 75361..76005 | - | 645 | WP_109548817.1 | hypothetical protein | - |
| HV012_RS23725 () | 75998..76258 | - | 261 | WP_001471568.1 | hypothetical protein | - |
| HV012_RS23730 () | 76251..76832 | - | 582 | WP_000675643.1 | hypothetical protein | - |
| HV012_RS23735 () | 77027..77533 | - | 507 | WP_023356293.1 | hypothetical protein | - |
| HV012_RS23740 () | 77606..78868 | - | 1263 | WP_000107690.1 | hypothetical protein | - |
| HV012_RS23745 () | 79170..79871 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| HV012_RS23750 () | 79868..80545 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| HV012_RS23755 () | 80542..81168 | - | 627 | WP_000484110.1 | norphogenetic protein | - |
| HV012_RS23760 () | 81066..81728 | - | 663 | WP_012817939.1 | hypothetical protein | - |
| HV012_RS23765 () | 81670..81825 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| HV012_RS23770 () | 81892..82470 | - | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| HV012_RS23775 () | 82473..82718 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| HV012_RS23780 () | 82865..83242 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| HV012_RS23785 () | 83252..84469 | + | 1218 | WP_001141908.1 | hypothetical protein | - |
| HV012_RS23790 () | 84473..85201 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| HV012_RS23795 () | 85188..85973 | + | 786 | WP_000602719.1 | hypothetical protein | - |
| HV012_RS23800 () | 85975..86991 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| HV012_RS23805 () | 86984..87616 | + | 633 | WP_000535202.1 | baseplate protein | - |
| HV012_RS23810 () | 87663..88661 | - | 999 | WP_032167108.1 | hypothetical protein | - |
| HV012_RS23815 () | 88661..90025 | - | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| HV012_RS23825 () | 90415..91242 | - | 828 | WP_000751808.1 | hypothetical protein | - |
| HV012_RS23840 () | 93019..95037 | - | 2019 | WP_032167109.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HV012_RS23845 () | 95034..95939 | - | 906 | WP_032167110.1 | recombination-associated protein RdgC | - |
| HV012_RS23850 () | 95932..96216 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| HV012_RS23855 () | 96513..96665 | + | 153 | WP_161403143.1 | hypothetical protein | - |
| HV012_RS23860 () | 96679..97467 | + | 789 | WP_000890198.1 | hypothetical protein | - |
| HV012_RS23865 () | 97507..97929 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| HV012_RS23870 () | 97955..98095 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| HV012_RS23875 () | 98107..98499 | + | 393 | WP_001281116.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|