MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106982 bp
Accession: NZ_CP056962 Location: 1..106982 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: plasmid pRHB41-C20_2
Accession: NZ_CP056962 Location: 1..106982 Organism: Escherichia fergusonii strain RHB41-C20 Replicon: plasmid pRHB41-C20_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV012_RS22715 () | 1..1056 | + | 1056 | WP_001711119.1 | replication protein RepA | - |
| HV012_RS22720 () | 1666..1878 | - | 213 | WP_001711118.1 | hypothetical protein | - |
| HV012_RS22725 () | 1878..2213 | - | 336 | WP_087905089.1 | hypothetical protein | - |
| HV012_RS22730 () | 2210..2389 | - | 180 | WP_023135695.1 | hypothetical protein | - |
| HV012_RS22735 () | 2429..2704 | - | 276 | WP_023135696.1 | hypothetical protein | - |
| HV012_RS22740 () | 2884..3516 | - | 633 | Protein_5 | IS3 family transposase ISLad1 | Transposase |
| HV012_RS22745 () | 3585..6602 | - | 3018 | WP_032187690.1 | type I restriction endonuclease subunit R | - |
| HV012_RS22750 () | 6617..7780 | - | 1164 | WP_063085660.1 | DUF4268 domain-containing protein | - |
| HV012_RS22755 () | 7790..9109 | - | 1320 | WP_181588871.1 | restriction endonuclease subunit S | - |
| HV012_RS22760 () | 9127..11556 | - | 2430 | WP_181588859.1 | type I restriction-modification system subunit M | - |
| HV012_RS22765 () | 11801..11940 | - | 140 | Protein_10 | SPFH/Band 7/PHB domain protein | - |
| HV012_RS22770 () | 11944..12144 | - | 201 | WP_001711109.1 | membrane protein | - |
| HV012_RS22775 () | 12235..14574 | - | 2340 | WP_181588862.1 | recombinase RecA | - |
| HV012_RS22780 () | 14577..14843 | - | 267 | WP_000920226.1 | hypothetical protein | - |
| HV012_RS22785 () | 14843..15787 | - | 945 | WP_023135728.1 | exonuclease | - |
| HV012_RS22790 () | 15848..16864 | - | 1017 | WP_123902826.1 | regulator | - |
| HV012_RS22795 () | 16984..17415 | - | 432 | WP_053292493.1 | hypothetical protein | - |
| HV012_RS22800 () | 17525..18085 | + | 561 | WP_049885240.1 | DNA-binding protein | - |
| HV012_RS22805 () | 18114..21632 | - | 3519 | WP_122224842.1 | DNA polymerase III subunit alpha | - |
| HV012_RS22810 () | 21813..23048 | - | 1236 | WP_097558678.1 | AAA family ATPase | - |
| HV012_RS22815 () | 23144..25375 | - | 2232 | WP_152922662.1 | porphyrin biosynthesis protein | - |
| HV012_RS22820 () | 25489..25701 | - | 213 | WP_024172742.1 | hypothetical protein | - |
| HV012_RS22825 () | 25957..26346 | + | 390 | WP_023135736.1 | hypothetical protein | - |
| HV012_RS22830 () | 26341..27444 | - | 1104 | WP_003980691.1 | site-specific integrase | - |
| HV012_RS22835 () | 27744..28160 | - | 417 | WP_097418269.1 | type II toxin-antitoxin system YafO family toxin | - |
| HV012_RS22840 () | 28151..28699 | - | 549 | WP_072662626.1 | hypothetical protein | - |
| HV012_RS22850 () | 29772..30077 | - | 306 | WP_097296363.1 | C-type natriuretic protein | - |
| HV012_RS22855 () | 30226..30438 | - | 213 | WP_023135646.1 | hypothetical protein | - |
| HV012_RS22860 () | 30598..31920 | - | 1323 | WP_023135648.1 | DNA ligase | - |
| HV012_RS22865 () | 31955..32431 | - | 477 | WP_172942250.1 | hypothetical protein | - |
| HV012_RS22870 () | 32514..33326 | - | 813 | WP_097476169.1 | hypothetical protein | - |
| HV012_RS22875 () | 33451..33864 | - | 414 | WP_033870693.1 | hypothetical protein | - |
| HV012_RS22880 () | 34084..34781 | + | 698 | Protein_32 | IS1 family transposase IS1D | Transposase |
| HV012_RS22885 () | 34797..35681 | + | 885 | Protein_33 | Putative beta-lactamase HcpC | VF |
| HV012_RS22890 () | 35673..36788 | - | 1116 | WP_024144822.1 | hypothetical protein | - |
| HV012_RS22895 () | 36945..38285 | - | 1341 | WP_087904724.1 | AAA family ATPase | - |
| HV012_RS22900 () | 38346..39071 | - | 726 | WP_097418314.1 | hypothetical protein | - |
| HV012_RS22905 () | 39354..40121 | + | 768 | WP_001711193.1 | hypothetical protein | - |
| HV012_RS22910 () | 40174..40527 | - | 354 | WP_161953766.1 | hypothetical protein | - |
| HV012_RS22915 () | 40533..41198 | - | 666 | WP_023135658.1 | AAA family ATPase | - |
| HV012_RS22920 () | 41518..41787 | + | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV012_RS22925 () | 41795..42316 | + | 522 | WP_077580870.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV012_RS22930 () | 42485..42736 | - | 252 | WP_023135660.1 | hypothetical protein | - |
| HV012_RS22935 () | 42739..43431 | - | 693 | WP_024172707.1 | membrane protein | - |
| HV012_RS22940 () | 43445..43768 | - | 324 | WP_077580871.1 | hypothetical protein | - |
| HV012_RS22945 () | 43902..44483 | - | 582 | WP_077580872.1 | tail fiber assembly protein | - |
| HV012_RS22950 () | 44492..45395 | - | 904 | Protein_46 | macro domain-containing protein | - |
| HV012_RS22955 () | 45392..46348 | - | 957 | Protein_47 | tail fiber protein | - |
| HV012_RS22960 () | 46805..48079 | - | 1275 | Protein_48 | tail fiber protein | - |
| HV012_RS22965 () | 49073..53173 | - | 4101 | Protein_49 | DUF1983 domain-containing protein | - |
| HV012_RS22970 () | 53190..53783 | - | 594 | WP_064674264.1 | tail assembly protein | - |
| HV012_RS22975 () | 53771..54568 | - | 798 | WP_032187295.1 | C40 family peptidase | - |
| HV012_RS22980 () | 54558..55259 | - | 702 | WP_074014850.1 | phage minor tail protein L | - |
| HV012_RS22985 () | 55342..55677 | - | 336 | WP_000442113.1 | phage tail protein | - |
| HV012_RS22990 () | 55720..60285 | - | 4566 | WP_130061055.1 | tape measure protein | - |
| HV012_RS22995 () | 60293..60517 | - | 225 | WP_000952684.1 | hypothetical protein | - |
| HV012_RS23000 () | 60643..60960 | - | 318 | WP_000163862.1 | hypothetical protein | - |
| HV012_RS23005 () | 61020..61766 | - | 747 | WP_032187301.1 | Ig domain-containing protein | - |
| HV012_RS23010 () | 61841..62224 | - | 384 | WP_063122781.1 | minor capsid protein | - |
| HV012_RS23015 () | 62226..62699 | - | 474 | WP_032187304.1 | hypothetical protein | - |
| HV012_RS23020 () | 62690..63034 | - | 345 | WP_032187305.1 | hypothetical protein | - |
| HV012_RS23025 () | 63132..63965 | - | 834 | WP_130061054.1 | hypothetical protein | - |
| HV012_RS23030 () | 63965..64399 | - | 435 | WP_032187307.1 | hypothetical protein | - |
| HV012_RS23035 () | 64443..64871 | - | 429 | WP_032187308.1 | Ig-like domain-containing protein | - |
| HV012_RS23040 () | 64946..65821 | - | 876 | WP_032187309.1 | hypothetical protein | - |
| HV012_RS23045 () | 65848..66741 | - | 894 | WP_063122778.1 | hypothetical protein | - |
| HV012_RS23050 () | 66764..68338 | - | 1575 | WP_032187311.1 | hypothetical protein | - |
| HV012_RS23055 () | 68372..69628 | - | 1257 | WP_023135663.1 | phage terminase large subunit | - |
| HV012_RS23060 () | 69631..70272 | - | 642 | WP_130061053.1 | DNA-binding protein | - |
| HV012_RS23065 () | 70468..70734 | - | 267 | WP_000176291.1 | hypothetical protein | - |
| HV012_RS23070 () | 70744..71634 | - | 891 | WP_165369582.1 | hypothetical protein | - |
| HV012_RS23075 () | 71640..71894 | - | 255 | WP_130061052.1 | hypothetical protein | - |
| HV012_RS23080 () | 71887..72525 | - | 639 | WP_016051719.1 | ATP-binding cassette domain-containing protein | - |
| HV012_RS23085 () | 72522..73190 | - | 669 | WP_074014858.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HV012_RS23090 () | 73190..73888 | - | 699 | WP_074014859.1 | ParB N-terminal domain-containing protein | - |
| HV012_RS23095 () | 73953..75512 | + | 1560 | WP_074014860.1 | DEAD/DEAH box helicase | - |
| HV012_RS23100 () | 75515..75793 | + | 279 | WP_001711179.1 | hypothetical protein | - |
| HV012_RS23105 () | 75853..76275 | + | 423 | Protein_77 | hypothetical protein | - |
| HV012_RS23110 () | 76280..76807 | + | 528 | WP_053292515.1 | transcriptional regulator | - |
| HV012_RS23115 () | 77129..77779 | + | 651 | WP_053292514.1 | hypothetical protein | - |
| HV012_RS23120 () | 77830..78060 | + | 231 | WP_001711144.1 | hypothetical protein | - |
| HV012_RS23125 () | 78684..79166 | - | 483 | WP_001009192.1 | hypothetical protein | - |
| HV012_RS23130 () | 79517..79891 | - | 375 | WP_074014865.1 | hypothetical protein | - |
| HV012_RS23135 () | 80009..80404 | - | 396 | WP_130061051.1 | hypothetical protein | - |
| HV012_RS23140 () | 80526..80837 | - | 312 | WP_001711135.1 | hypothetical protein | - |
| HV012_RS23145 () | 80998..81327 | - | 330 | WP_032187826.1 | hypothetical protein | - |
| HV012_RS23150 () | 81467..81681 | - | 215 | Protein_86 | hypothetical protein | - |
| HV012_RS23155 () | 83297..83854 | - | 558 | WP_112916386.1 | hypothetical protein | - |
| HV012_RS23160 () | 83939..84256 | - | 318 | WP_112916385.1 | hypothetical protein | - |
| HV012_RS23165 () | 84256..84492 | - | 237 | WP_032187612.1 | DUF1380 family protein | - |
| HV012_RS23170 () | 84578..84844 | - | 267 | WP_032187611.1 | hypothetical protein | - |
| HV012_RS23175 () | 85031..85234 | + | 204 | WP_032187610.1 | putative selenium delivery protein YdfZ | - |
| HV012_RS23180 () | 85290..85988 | - | 699 | WP_074014813.1 | DUF1311 domain-containing protein | - |
| HV012_RS23185 () | 86027..86242 | - | 216 | WP_032187608.1 | hypothetical protein | - |
| HV012_RS23190 () | 86289..86528 | - | 240 | WP_072650124.1 | hypothetical protein | - |
| HV012_RS23195 () | 86525..87214 | - | 690 | WP_181588845.1 | hypothetical protein | - |
| HV012_RS23200 () | 87273..88958 | - | 1686 | WP_181588846.1 | DUF4942 domain-containing protein | - |
| HV012_RS23205 () | 89099..89671 | - | 573 | WP_181588848.1 | hypothetical protein | - |
| HV012_RS23210 () | 89780..90538 | - | 759 | WP_181588879.1 | Rha family transcriptional regulator | - |
| HV012_RS23215 () | 90702..90890 | - | 189 | WP_097296294.1 | hypothetical protein | - |
| HV012_RS23220 () | 90900..91400 | - | 501 | WP_181588850.1 | hypothetical protein | - |
| HV012_RS23225 () | 91543..92151 | - | 609 | WP_087905081.1 | ribonuclease HI | - |
| HV012_RS23230 () | 92746..92976 | - | 231 | WP_025670509.1 | hypothetical protein | - |
| HV012_RS23235 () | 93179..93772 | - | 594 | WP_004109976.1 | phage N-6-adenine-methyltransferase | - |
| HV012_RS23240 () | 93928..94800 | - | 873 | WP_181588852.1 | hypothetical protein | - |
| HV012_RS23245 () | 94929..95483 | - | 555 | WP_025670512.1 | 3'-5' exonuclease | - |
| HV012_RS23250 () | 95493..95912 | - | 420 | WP_025670513.1 | hypothetical protein | - |
| HV012_RS23255 () | 95976..96620 | - | 645 | WP_033546606.1 | AAA family ATPase | - |
| HV012_RS23260 () | 96620..97090 | - | 471 | WP_166494814.1 | dihydrofolate reductase | - |
| HV012_RS23265 () | 97093..97488 | - | 396 | WP_160956520.1 | hypothetical protein | - |
| HV012_RS23270 () | 97508..98611 | - | 1104 | WP_181588855.1 | thymidylate synthase | - |
| HV012_RS23275 () | 98791..99669 | - | 879 | WP_032187593.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| HV012_RS23280 () | 99935..100504 | - | 570 | WP_025670519.1 | hypothetical protein | - |
| HV012_RS23285 () | 100501..101277 | - | 777 | WP_149017521.1 | hypothetical protein | - |
| HV012_RS23290 () | 101253..101999 | - | 747 | WP_114217553.1 | hypothetical protein | - |
| HV012_RS23295 () | 101989..103905 | - | 1917 | WP_106509446.1 | AAA family ATPase | - |
| HV012_RS23300 () | 104135..105220 | - | 1086 | WP_032187693.1 | metallophosphoesterase | - |
| HV012_RS23305 () | 105617..106261 | - | 645 | WP_181588857.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|