MGE detailed information
MGE type: Prophage MGE length: 61562 bp
Accession: NZ_CP056907 Location: 2211841..2273402 Organism: Citrobacter freundii strain RHBSTW-00011 Replicon: chromosome
Accession: NZ_CP056907 Location: 2211841..2273402 Organism: Citrobacter freundii strain RHBSTW-00011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV032_RS10505 () | 2207975..2209786 | + | 1812 | WP_043016694.1 | phosphogluconate dehydratase | - |
| HV032_RS10510 () | 2209821..2210462 | + | 642 | WP_043016693.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV032_RS10515 () | 2210530..2211708 | - | 1179 | WP_075146018.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV032_RS10520 () | 2211841..2212131 | + | 291 | WP_032943780.1 | DNA damage-inducible protein YebG | - |
| HV032_RS10525 () | 2212253..2212606 | + | 354 | WP_043016690.1 | hypothetical protein | - |
| HV032_RS10530 () | 2212701..2213360 | + | 660 | WP_075146019.1 | tellurite resistance TerB family protein | - |
| HV032_RS10535 () | 2213447..2215501 | + | 2055 | WP_181634582.1 | oligopeptidase B | - |
| HV032_RS10540 () | 2215504..2216166 | - | 663 | WP_181634583.1 | exodeoxyribonuclease X | - |
| HV032_RS10545 () | 2216190..2216846 | - | 657 | WP_181634584.1 | carbon-nitrogen hydrolase family protein | - |
| HV032_RS10550 () | 2216953..2217183 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV032_RS10555 () | 2217327..2217701 | + | 375 | WP_047410546.1 | CopC domain-containing protein YobA | - |
| HV032_RS10560 () | 2217705..2218577 | + | 873 | WP_043016685.1 | copper homeostasis membrane protein CopD | - |
| HV032_RS10565 () | 2218598..2218936 | + | 339 | WP_043016684.1 | YebY family protein | - |
| - () | 2219057..2219200 | - | 144 | - | - | Antitoxin Detail |
| - () | 2219092..2219195 | + | 104 | - | - | Toxin Detail |
| HV032_RS10570 () | 2219328..2220407 | - | 1080 | WP_148373922.1 | hypothetical protein ; Integrase | Integrase |
| HV032_RS10575 () | 2220385..2220645 | - | 261 | WP_072211989.1 | hypothetical protein | - |
| HV032_RS10580 () | 2220702..2220942 | - | 241 | Protein_2070 | DUF4060 family protein | - |
| HV032_RS10585 () | 2220920..2221222 | - | 303 | WP_181634585.1 | hypothetical protein | - |
| HV032_RS10590 () | 2221219..2223051 | - | 1833 | WP_181634586.1 | hypothetical protein | - |
| HV032_RS10595 () | 2223385..2223570 | - | 186 | WP_175330400.1 | hypothetical protein | - |
| HV032_RS10600 () | 2223563..2223757 | - | 195 | WP_181634587.1 | hypothetical protein | - |
| HV032_RS10605 () | 2224058..2224549 | + | 492 | WP_181634588.1 | hypothetical protein | - |
| HV032_RS10610 () | 2224967..2225383 | - | 417 | WP_181634589.1 | helix-turn-helix domain-containing protein | - |
| HV032_RS10615 () | 2225462..2225686 | + | 225 | WP_181634590.1 | transcriptional regulator | - |
| HV032_RS10620 () | 2225673..2226149 | + | 477 | WP_181626229.1 | hypothetical protein | - |
| HV032_RS10625 () | 2226162..2226404 | + | 243 | WP_181634591.1 | DUF4222 domain-containing protein | - |
| HV032_RS10630 () | 2226401..2227426 | + | 1026 | WP_181634592.1 | helix-turn-helix domain-containing protein | - |
| HV032_RS10635 () | 2227314..2227865 | + | 552 | WP_160298758.1 | replication protein | - |
| HV032_RS10640 () | 2227879..2228541 | + | 663 | WP_180566158.1 | DUF1627 domain-containing protein | - |
| HV032_RS10645 () | 2228538..2228762 | + | 225 | WP_046671208.1 | hypothetical protein | - |
| HV032_RS10650 () | 2228759..2228983 | + | 225 | WP_175330393.1 | hypothetical protein | - |
| HV032_RS10655 () | 2228980..2229234 | + | 255 | WP_175330391.1 | hypothetical protein | - |
| HV032_RS10660 () | 2229231..2229575 | + | 345 | WP_181634593.1 | hypothetical protein | - |
| HV032_RS10665 () | 2229568..2230041 | + | 474 | WP_048241184.1 | class I SAM-dependent methyltransferase | - |
| HV032_RS10670 () | 2230045..2230224 | + | 180 | WP_181634754.1 | hypothetical protein | - |
| HV032_RS10675 () | 2230359..2231141 | + | 783 | WP_046671205.1 | hypothetical protein | - |
| HV032_RS10680 () | 2231160..2231356 | + | 197 | Protein_2090 | DNA cytosine methyltransferase | - |
| HV032_RS10685 () | 2232086..2232322 | + | 237 | WP_046671203.1 | DinI-like family protein | - |
| HV032_RS10690 () | 2232444..2232626 | + | 183 | WP_046671202.1 | hypothetical protein | - |
| HV032_RS10695 () | 2232771..2233079 | + | 309 | WP_181634594.1 | DUF968 domain-containing protein | - |
| HV032_RS10700 () | 2233072..2233431 | + | 360 | WP_181634595.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV032_RS10705 () | 2233428..2234027 | + | 600 | WP_181634596.1 | hypothetical protein | - |
| HV032_RS10710 () | 2234702..2235088 | + | 387 | WP_181634597.1 | phage holin family protein | - |
| HV032_RS10715 () | 2235075..2235356 | + | 282 | WP_181634598.1 | phage holin family protein | - |
| HV032_RS10720 () | 2235512..2236129 | + | 618 | WP_181634599.1 | glycoside hydrolase family 19 protein | - |
| HV032_RS10725 () | 2236126..2236662 | + | 537 | WP_181634600.1 | DUF2514 domain-containing protein | - |
| HV032_RS10730 () | 2236751..2237005 | + | 255 | WP_181634601.1 | hypothetical protein | - |
| HV032_RS10735 () | 2237164..2237340 | + | 177 | WP_181634602.1 | hypothetical protein | - |
| HV032_RS10740 () | 2237353..2238081 | + | 729 | WP_181634603.1 | Fur-regulated protein | - |
| HV032_RS10745 () | 2238253..2238687 | + | 435 | WP_181634604.1 | gas vesicle protein | - |
| HV032_RS10750 () | 2238871..2239212 | + | 342 | WP_181634605.1 | DUF2190 family protein | - |
| HV032_RS10755 () | 2239420..2239908 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| HV032_RS10760 () | 2239908..2242010 | + | 2103 | WP_047499052.1 | phage terminase large subunit family protein | - |
| HV032_RS10765 () | 2242007..2242222 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| HV032_RS10770 () | 2242219..2243727 | + | 1509 | WP_047499054.1 | phage portal protein | - |
| HV032_RS10775 () | 2243654..2245696 | + | 2043 | WP_181634606.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HV032_RS10780 () | 2245789..2246115 | + | 327 | WP_047499162.1 | DUF2190 family protein | - |
| HV032_RS10785 () | 2246108..2246383 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| HV032_RS10790 () | 2246393..2246971 | + | 579 | WP_159137318.1 | phage tail protein | - |
| HV032_RS10795 () | 2246968..2247369 | + | 402 | WP_047499059.1 | phage minor tail U family protein | - |
| HV032_RS10800 () | 2247379..2248122 | + | 744 | WP_047499060.1 | phage tail protein | - |
| HV032_RS10805 () | 2248133..2248564 | + | 432 | WP_047499062.1 | phage minor tail protein G | - |
| HV032_RS10810 () | 2248573..2248887 | + | 315 | WP_071845155.1 | phage tail assembly protein T | - |
| HV032_RS10815 () | 2248871..2252014 | + | 3144 | WP_181634607.1 | phage tail tape measure protein | - |
| HV032_RS10820 () | 2252018..2252365 | + | 348 | WP_047499067.1 | phage tail protein | - |
| HV032_RS10825 () | 2252362..2253117 | + | 756 | WP_121581650.1 | phage minor tail protein L | - |
| HV032_RS10830 () | 2253119..2253829 | + | 711 | WP_047502650.1 | C40 family peptidase | - |
| HV032_RS10835 () | 2253859..2254194 | + | 336 | WP_153072184.1 | hypothetical protein | - |
| HV032_RS10840 () | 2254250..2254852 | + | 603 | WP_121581796.1 | tail assembly protein | - |
| HV032_RS10845 () | 2254905..2258090 | + | 3186 | WP_181634608.1 | host specificity protein J | - |
| HV032_RS10850 () | 2258090..2258404 | + | 315 | WP_181634609.1 | hypothetical protein | - |
| HV032_RS10855 () | 2258405..2259079 | + | 675 | WP_181634610.1 | hypothetical protein | - |
| HV032_RS10860 () | 2259485..2260657 | + | 1173 | WP_181634611.1 | tail fiber domain-containing protein | - |
| HV032_RS10865 () | 2260839..2261081 | - | 243 | WP_181634612.1 | hypothetical protein | - |
| HV032_RS10870 () | 2261078..2261320 | - | 243 | WP_181634613.1 | DinI family protein | - |
| HV032_RS10875 () | 2261414..2261494 | - | 81 | Protein_2129 | DinI family protein | - |
| HV032_RS10880 () | 2261641..2262030 | + | 390 | WP_181634614.1 | LexA family transcriptional regulator | - |
| HV032_RS10885 () | 2262228..2262431 | - | 204 | WP_181634615.1 | hypothetical protein | - |
| HV032_RS10890 () | 2262598..2263266 | - | 669 | WP_181634616.1 | SOS response-associated peptidase | - |
| HV032_RS10895 () | 2263379..2263476 | - | 98 | Protein_2133 | DinI-like family protein | - |
| HV032_RS10900 () | 2263973..2265229 | + | 1257 | WP_181634617.1 | hypothetical protein | - |
| HV032_RS10905 () | 2265331..2265972 | + | 642 | WP_181634618.1 | protein-serine/threonine phosphatase | - |
| HV032_RS10910 () | 2265973..2266164 | - | 192 | WP_016152779.1 | YebW family protein | - |
| HV032_RS10915 () | 2266267..2266503 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV032_RS10920 () | 2266604..2268049 | - | 1446 | WP_181634714.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV032_RS10925 () | 2268108..2270741 | - | 2634 | WP_043016681.1 | hypothetical protein | VF |
| HV032_RS10930 () | 2270710..2271993 | - | 1284 | WP_043016680.1 | membrane integrity lipid transport subunit YebS | - |
| HV032_RS10935 () | 2272122..2272619 | + | 498 | WP_043016679.1 | GAF domain-containing protein | - |
| HV032_RS10940 () | 2272716..2273402 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| HV032_RS10945 () | 2273422..2275470 | + | 2049 | WP_043016678.1 | carboxy terminal-processing peptidase | - |
| HV032_RS10950 () | 2275663..2276544 | + | 882 | WP_043016677.1 | protease HtpX | - |
| HV032_RS10955 () | 2276877..2277458 | + | 582 | WP_043016676.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|