MGE detailed information
MGE type: Genomic_island MGE length: 41585 bp
Accession: NZ_CP056899 Location: 997613..1039197 Organism: Citrobacter sp. RHBSTW-00017 Replicon: chromosome
Accession: NZ_CP056899 Location: 997613..1039197 Organism: Citrobacter sp. RHBSTW-00017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV037_RS04850 () | 992917..994434 | + | 1518 | WP_005123357.1 | lysine--tRNA ligase | - |
| HV037_RS04855 () | 994520..995068 | - | 549 | WP_103284191.1 | isopentenyl-diphosphate Delta-isomerase | - |
| HV037_RS04860 () | 995235..995993 | + | 759 | WP_016157411.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HV037_RS04870 () | 996342..997520 | + | 1179 | WP_049239070.1 | tyrosine-type recombinase/integrase | - |
| HV037_RS04875 () | 998743..999522 | + | 780 | WP_049239072.1 | hypothetical protein | - |
| HV037_RS04880 () | 999600..1000082 | + | 483 | WP_049239073.1 | hypothetical protein | - |
| HV037_RS04885 () | 1000114..1000423 | + | 310 | Protein_959 | hypothetical protein | - |
| HV037_RS04890 () | 1001549..1001791 | + | 243 | WP_014837244.1 | IS6 family transposase IS1327 | Transposase |
| HV037_RS04895 () | 1001675..1001971 | - | 297 | Protein_961 | IS6 family transposase IS1327 | Transposase |
| HV037_RS04900 () | 1002191..1003408 | - | 1218 | WP_074075385.1 | M24 family metallopeptidase | - |
| HV037_RS04905 () | 1003495..1004448 | - | 954 | WP_014837246.1 | Glycine cleavage system transcriptional activator | VF |
| HV037_RS04910 () | 1004605..1005453 | + | 849 | WP_074075384.1 | transporter substrate-binding domain-containing protein | - |
| HV037_RS04915 () | 1005477..1006148 | + | 672 | WP_042933959.1 | amino acid ABC transporter permease | - |
| HV037_RS04920 () | 1006145..1006807 | + | 663 | WP_074075383.1 | amino acid ABC transporter permease | - |
| HV037_RS04925 () | 1006812..1007630 | + | 819 | WP_014837252.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| HV037_RS04930 () | 1007627..1008571 | + | 945 | WP_181500195.1 | DMT family transporter | - |
| HV037_RS04935 () | 1008706..1008921 | + | 216 | WP_103433584.1 | transposase | - |
| HV037_RS04940 () | 1009152..1010765 | - | 1614 | WP_014837254.1 | IS66 family transposase ISEc49 | Transposase |
| HV037_RS04945 () | 1010772..1011152 | - | 381 | WP_014837255.1 | IS66 family transposase ISEc49 | Transposase |
| HV037_RS04950 () | 1011139..1011471 | - | 333 | WP_071886350.1 | IS66 family transposase ISEc49 | Transposase |
| HV037_RS04955 () | 1011549..1011884 | + | 336 | Protein_973 | IS66 family transposase ISSfl3 | Transposase |
| HV037_RS04960 () | 1012189..1012667 | - | 479 | Protein_974 | transposase | - |
| HV037_RS04965 () | 1012877..1013194 | + | 318 | WP_014837258.1 | hypothetical protein | - |
| HV037_RS04970 () | 1013442..1013627 | - | 186 | Protein_976 | fructuronate reductase | - |
| HV037_RS04975 () | 1013626..1014372 | + | 747 | Protein_977 | IS21 family transposase IS21 | Transposase |
| HV037_RS04980 () | 1014460..1015116 | - | 657 | WP_125295935.1 | hypothetical protein | - |
| HV037_RS04985 () | 1015246..1015462 | + | 217 | Protein_979 | helix-turn-helix domain-containing protein | - |
| HV037_RS04990 () | 1015496..1015969 | - | 474 | Protein_980 | IS66 family transposase ISCro1 | Transposase |
| HV037_RS04995 () | 1015971..1016033 | - | 63 | WP_071846184.1 | hypothetical protein | - |
| HV037_RS05000 () | 1016718..1017275 | + | 558 | WP_044349215.1 | Major fimbrial subunit SMF-1 | VF |
| HV037_RS05005 () | 1017357..1018085 | + | 729 | WP_042933963.1 | putative fimbrial chaperone YadV | VF |
| HV037_RS05010 () | 1018161..1020722 | + | 2562 | WP_181500196.1 | Outer membrane usher protein HtrE | VF |
| HV037_RS05015 () | 1020719..1021756 | + | 1038 | WP_181500197.1 | Fimbria adhesin protein | VF |
| HV037_RS05020 () | 1022185..1022772 | - | 588 | WP_047683733.1 | hypothetical protein | - |
| HV037_RS05025 () | 1022995..1023708 | - | 714 | WP_042933967.1 | Cyclic di-GMP phosphodiesterase PdeH | VF |
| HV037_RS05030 () | 1023724..1024126 | - | 403 | Protein_988 | fimbrial protein | - |
| HV037_RS05035 () | 1024310..1024579 | - | 270 | Protein_989 | IS66 family transposase ISEc49 | Transposase |
| HV037_RS05040 () | 1024607..1024912 | + | 306 | WP_042933968.1 | HigA family addiction module antidote protein | - |
| HV037_RS05045 () | 1025019..1025348 | + | 330 | Protein_991 | IS4 family transposase ISIlo1 | Transposase |
| HV037_RS05050 () | 1025464..1025670 | - | 207 | WP_047725194.1 | AlpA family transcriptional regulator | - |
| HV037_RS05055 () | 1025973..1026215 | - | 243 | WP_044350487.1 | AlpA family phage regulatory protein | - |
| HV037_RS05060 () | 1026328..1027194 | + | 867 | WP_044350485.1 | hypothetical protein | - |
| HV037_RS05065 () | 1027537..1028994 | - | 1458 | WP_014837274.1 | DUF3987 domain-containing protein | - |
| HV037_RS05070 () | 1029229..1029861 | - | 633 | WP_049238458.1 | inovirus Gp2 family protein | - |
| HV037_RS05075 () | 1030594..1031418 | + | 825 | WP_049238647.1 | DUF945 domain-containing protein | - |
| HV037_RS05080 () | 1031415..1031672 | + | 258 | WP_049238645.1 | DUF905 domain-containing protein | - |
| HV037_RS05085 () | 1031752..1032195 | + | 444 | WP_049238643.1 | antirestriction protein | - |
| HV037_RS05090 () | 1032207..1032686 | + | 480 | WP_049238640.1 | DNA repair protein RadC | - |
| HV037_RS05095 () | 1032700..1032921 | + | 222 | WP_049238638.1 | DUF987 domain-containing protein | - |
| HV037_RS05100 () | 1032979..1033305 | + | 327 | WP_171547612.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV037_RS05105 () | 1033362..1033751 | + | 390 | WP_049238634.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV037_RS05110 () | 1033838..1034677 | + | 840 | WP_049238632.1 | DUF4942 domain-containing protein | - |
| HV037_RS05115 () | 1036092..1036619 | + | 528 | WP_019077624.1 | hypothetical protein | - |
| HV037_RS05120 () | 1036877..1038154 | + | 1278 | WP_016157409.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| HV037_RS05125 () | 1038157..1039197 | + | 1041 | WP_103284190.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| HV037_RS05130 () | 1039227..1041722 | + | 2496 | WP_181624250.1 | Vi polysaccharide biosynthesis protein TviD | - |
| HV037_RS05135 () | 1041903..1042883 | - | 981 | WP_000019445.1 | IS5-like element ISKpn26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|