MGE detailed information
MGE type: Genomic_island MGE length: 41489 bp
Accession: NZ_CP056896 Location: 961388..1002876 Organism: Citrobacter sp. RHBSTW-00021 Replicon: chromosome
Accession: NZ_CP056896 Location: 961388..1002876 Organism: Citrobacter sp. RHBSTW-00021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV039_RS04675 () | 956692..958209 | + | 1518 | WP_005123357.1 | lysine--tRNA ligase | - |
| HV039_RS04680 () | 958295..958843 | - | 549 | WP_103284191.1 | isopentenyl-diphosphate Delta-isomerase | - |
| HV039_RS04685 () | 959010..959768 | + | 759 | WP_016157411.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HV039_RS04695 () | 960117..961295 | + | 1179 | WP_049239070.1 | tyrosine-type recombinase/integrase | - |
| HV039_RS04700 () | 962518..963297 | + | 780 | WP_049239072.1 | hypothetical protein | - |
| HV039_RS04705 () | 963375..963857 | + | 483 | WP_049239073.1 | hypothetical protein | - |
| HV039_RS04710 () | 963889..964198 | + | 310 | Protein_924 | hypothetical protein | - |
| HV039_RS04715 () | 965324..965566 | + | 243 | WP_014837244.1 | IS6 family transposase IS1327 | Transposase |
| HV039_RS04720 () | 965450..965746 | - | 297 | Protein_926 | IS6 family transposase IS1327 | Transposase |
| HV039_RS04725 () | 965966..967183 | - | 1218 | WP_074075385.1 | M24 family metallopeptidase | - |
| HV039_RS04730 () | 967270..968223 | - | 954 | WP_014837246.1 | HTH-type transcriptional regulator ArgP | VF |
| HV039_RS04735 () | 968380..969228 | + | 849 | WP_074075384.1 | transporter substrate-binding domain-containing protein | - |
| HV039_RS04740 () | 969252..969923 | + | 672 | WP_042933959.1 | amino acid ABC transporter permease | - |
| HV039_RS04745 () | 969920..970582 | + | 663 | WP_074075383.1 | amino acid ABC transporter permease | - |
| HV039_RS04750 () | 970587..971405 | + | 819 | WP_014837252.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV039_RS04755 () | 971402..972346 | + | 945 | WP_181500195.1 | DMT family transporter | - |
| HV039_RS04760 () | 972481..972696 | + | 216 | WP_103433584.1 | transposase | - |
| HV039_RS04765 () | 972927..974540 | - | 1614 | WP_014837254.1 | IS66 family transposase ISEc49 | Transposase |
| HV039_RS04770 () | 974547..974927 | - | 381 | WP_014837255.1 | IS66 family transposase ISEc49 | Transposase |
| HV039_RS04775 () | 974914..975246 | - | 333 | WP_071886350.1 | IS66 family transposase ISEc49 | Transposase |
| HV039_RS04780 () | 975324..975659 | + | 336 | Protein_938 | IS66 family transposase ISSfl3 | Transposase |
| HV039_RS04785 () | 975964..976442 | - | 479 | Protein_939 | transposase | - |
| HV039_RS04790 () | 976652..976969 | + | 318 | WP_014837258.1 | hypothetical protein | - |
| HV039_RS04795 () | 977217..977402 | - | 186 | Protein_941 | fructuronate reductase | - |
| HV039_RS04800 () | 977401..978147 | + | 747 | Protein_942 | IS21 family transposase IS21 | Transposase |
| HV039_RS04805 () | 978235..978891 | - | 657 | WP_125295935.1 | hypothetical protein | - |
| HV039_RS04810 () | 979021..979237 | + | 217 | Protein_944 | helix-turn-helix domain-containing protein | - |
| HV039_RS04815 () | 979271..979744 | - | 474 | Protein_945 | IS66 family transposase ISCro1 | Transposase |
| HV039_RS04820 () | 979746..979808 | - | 63 | WP_071846184.1 | hypothetical protein | - |
| HV039_RS04825 () | 980493..981050 | + | 558 | WP_044349215.1 | hypothetical protein | VF |
| HV039_RS04830 () | 981132..981860 | + | 729 | WP_042933963.1 | hypothetical protein | VF |
| HV039_RS04835 () | 981936..984497 | + | 2562 | WP_181500196.1 | hypothetical protein | VF |
| HV039_RS04840 () | 984494..985531 | + | 1038 | WP_181500197.1 | hypothetical protein | VF |
| HV039_RS04845 () | 985960..986547 | - | 588 | WP_047683733.1 | hypothetical protein | - |
| HV039_RS04850 () | 986770..987483 | - | 714 | WP_042933967.1 | hypothetical protein | VF |
| HV039_RS04855 () | 987499..987901 | - | 403 | Protein_953 | fimbrial protein | - |
| HV039_RS04860 () | 988085..988354 | - | 270 | Protein_954 | IS66 family transposase ISEc49 | Transposase |
| HV039_RS04865 () | 988382..988687 | + | 306 | WP_042933968.1 | HigA family addiction module antidote protein | - |
| HV039_RS04870 () | 988794..989123 | + | 330 | Protein_956 | IS4 family transposase ISIlo1 | Transposase |
| HV039_RS04875 () | 989239..989445 | - | 207 | WP_047725194.1 | AlpA family transcriptional regulator | - |
| HV039_RS04880 () | 989748..989990 | - | 243 | WP_044350487.1 | AlpA family phage regulatory protein | - |
| HV039_RS04885 () | 990103..990969 | + | 867 | WP_044350485.1 | hypothetical protein | - |
| HV039_RS04890 () | 991312..992769 | - | 1458 | WP_014837274.1 | DUF3987 domain-containing protein | - |
| HV039_RS04895 () | 993004..993636 | - | 633 | WP_049238458.1 | inovirus Gp2 family protein | - |
| HV039_RS04900 () | 994273..995097 | + | 825 | WP_049238647.1 | DUF945 domain-containing protein | - |
| HV039_RS04905 () | 995094..995351 | + | 258 | WP_049238645.1 | DUF905 domain-containing protein | - |
| HV039_RS04910 () | 995431..995874 | + | 444 | WP_049238643.1 | antirestriction protein | - |
| HV039_RS04915 () | 995886..996365 | + | 480 | WP_049238640.1 | DNA repair protein RadC | - |
| HV039_RS04920 () | 996379..996600 | + | 222 | WP_049238638.1 | DUF987 domain-containing protein | - |
| HV039_RS04925 () | 996658..996984 | + | 327 | WP_171547612.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV039_RS04930 () | 997041..997430 | + | 390 | WP_049238634.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV039_RS04935 () | 997517..998356 | + | 840 | WP_049238632.1 | DUF4942 domain-containing protein | - |
| HV039_RS04940 () | 999771..1000298 | + | 528 | WP_019077624.1 | hypothetical protein | - |
| HV039_RS04945 () | 1000556..1001833 | + | 1278 | WP_016157409.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| HV039_RS04950 () | 1001836..1002876 | + | 1041 | WP_103284190.1 | GDP-L-fucose synthase | VF |
| HV039_RS04955 () | 1002906..1005401 | + | 2496 | WP_103284189.1 | Vi polysaccharide biosynthesis protein TviD | - |
| HV039_RS04960 () | 1005582..1006562 | - | 981 | WP_000019445.1 | IS5-like element ISKpn26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|