MGE detailed information
MGE type: Prophage MGE length: 98144 bp
Accession: NZ_CP056896 Location: 2893271..2991414 Organism: Citrobacter sp. RHBSTW-00021 Replicon: chromosome
Accession: NZ_CP056896 Location: 2893271..2991414 Organism: Citrobacter sp. RHBSTW-00021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV039_RS13995 () | 2890129..2891010 | - | 882 | WP_003034964.1 | protease HtpX | - |
| HV039_RS14000 () | 2891203..2893251 | - | 2049 | WP_103283909.1 | carboxy terminal-processing peptidase | - |
| HV039_RS14005 () | 2893271..2893957 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| HV039_RS14010 () | 2894054..2894551 | - | 498 | WP_016152783.1 | GAF domain-containing protein | - |
| HV039_RS14015 () | 2894680..2895963 | + | 1284 | WP_103283910.1 | membrane integrity lipid transport subunit YebS | - |
| HV039_RS14020 () | 2895932..2898565 | + | 2634 | WP_103283911.1 | hypothetical protein | VF |
| HV039_RS14025 () | 2898589..2900070 | + | 1482 | WP_146053227.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV039_RS14030 () | 2900171..2900407 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV039_RS14035 () | 2900510..2900701 | + | 192 | WP_016152779.1 | YebW family protein | - |
| HV039_RS14040 () | 2900702..2901343 | - | 642 | WP_047358581.1 | protein-serine/threonine phosphatase | - |
| HV039_RS14045 () | 2901421..2902587 | - | 1167 | Protein_2756 | hypothetical protein | - |
| HV039_RS14050 () | 2902604..2903301 | - | 698 | Protein_2757 | IS1 family transposase | - |
| HV039_RS14055 () | 2904130..2904801 | + | 672 | WP_049041258.1 | SOS response-associated peptidase | - |
| HV039_RS14060 () | 2904794..2906062 | - | 1269 | WP_049041262.1 | Y-family DNA polymerase | - |
| HV039_RS14065 () | 2906065..2906484 | - | 420 | WP_019078490.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV039_RS14070 () | 2906562..2906804 | + | 243 | WP_049041271.1 | DinI family protein | - |
| HV039_RS14075 () | 2906849..2908207 | - | 1359 | WP_049041273.1 | hypothetical protein | - |
| HV039_RS14080 () | 2908217..2909161 | - | 945 | WP_181500108.1 | hypothetical protein | - |
| HV039_RS14085 () | 2909161..2912409 | - | 3249 | WP_049041277.1 | host specificity protein J | - |
| HV039_RS14090 () | 2912464..2913063 | - | 600 | WP_049041279.1 | tail assembly protein | - |
| HV039_RS14095 () | 2913051..2913782 | - | 732 | WP_049041282.1 | C40 family peptidase | - |
| HV039_RS14100 () | 2913795..2914568 | - | 774 | WP_049041285.1 | phage minor tail protein L | - |
| HV039_RS14105 () | 2914577..2914927 | - | 351 | WP_049041287.1 | phage tail protein | - |
| HV039_RS14110 () | 2915189..2915551 | + | 363 | WP_049041297.1 | hypothetical protein | - |
| HV039_RS14115 () | 2915597..2915821 | - | 225 | WP_049041291.1 | hypothetical protein | - |
| HV039_RS14120 () | 2915842..2916417 | + | 576 | WP_049041294.1 | hypothetical protein | - |
| HV039_RS14125 () | 2916509..2916919 | - | 411 | WP_175330120.1 | hypothetical protein | - |
| HV039_RS14130 () | 2916982..2917206 | - | 225 | WP_049041295.1 | hypothetical protein | - |
| HV039_RS14135 () | 2917206..2920337 | - | 3132 | WP_103283914.1 | phage tail tape measure protein | - |
| HV039_RS14140 () | 2920337..2920624 | - | 288 | WP_035895695.1 | DUF1799 domain-containing protein | - |
| HV039_RS14145 () | 2920642..2920980 | - | 339 | WP_049040904.1 | hypothetical protein | - |
| HV039_RS14150 () | 2921021..2921551 | - | 531 | WP_049040902.1 | KilA-N domain-containing protein | - |
| HV039_RS14155 () | 2921768..2922700 | - | 933 | WP_049040900.1 | immunoglobulin domain-containing protein | - |
| HV039_RS14160 () | 2922747..2923196 | - | 450 | WP_019076571.1 | DUF4128 domain-containing protein | - |
| HV039_RS14165 () | 2923186..2923785 | - | 600 | WP_049040897.1 | hypothetical protein | - |
| HV039_RS14170 () | 2923787..2924140 | - | 354 | WP_049040895.1 | hypothetical protein | - |
| HV039_RS14175 () | 2924142..2924624 | - | 483 | WP_049040893.1 | hypothetical protein | - |
| HV039_RS14180 () | 2924627..2925040 | - | 414 | WP_181631222.1 | hypothetical protein | - |
| HV039_RS14185 () | 2925080..2926219 | - | 1140 | WP_016156686.1 | hypothetical protein | - |
| HV039_RS14190 () | 2926237..2926989 | - | 753 | WP_049041726.1 | hypothetical protein | - |
| HV039_RS14195 () | 2927116..2927259 | - | 144 | WP_158655785.1 | hypothetical protein | - |
| HV039_RS14200 () | 2927262..2928368 | - | 1107 | WP_049041728.1 | phage Mu F like family protein | - |
| HV039_RS14205 () | 2928370..2929773 | - | 1404 | WP_049041730.1 | DUF4055 domain-containing protein | - |
| HV039_RS14210 () | 2929778..2931349 | - | 1572 | WP_049041731.1 | terminase | - |
| HV039_RS14215 () | 2931346..2931996 | - | 651 | WP_049041734.1 | hypothetical protein | - |
| HV039_RS14220 () | 2932120..2932548 | + | 429 | WP_049041738.1 | hypothetical protein | - |
| HV039_RS14225 () | 2933058..2933330 | - | 273 | WP_049041743.1 | hypothetical protein | - |
| HV039_RS14230 () | 2933327..2933869 | - | 543 | WP_049041746.1 | glycoside hydrolase family 108 protein | - |
| HV039_RS14235 () | 2933869..2934144 | - | 276 | WP_049041753.1 | phage holin family protein | - |
| HV039_RS14240 () | 2934141..2934539 | - | 399 | WP_049041756.1 | membrane protein | - |
| HV039_RS14245 () | 2934847..2935176 | - | 330 | WP_049041759.1 | hypothetical protein | - |
| HV039_RS14250 () | 2935804..2936508 | - | 705 | WP_049041761.1 | antiterminator | - |
| HV039_RS14255 () | 2936505..2936642 | - | 138 | WP_016156248.1 | YlcG family protein | - |
| HV039_RS14260 () | 2936639..2937247 | - | 609 | WP_103283916.1 | recombination protein NinG | - |
| HV039_RS14265 () | 2937250..2937456 | - | 207 | WP_049041776.1 | hypothetical protein | - |
| HV039_RS14270 () | 2937456..2938055 | - | 600 | WP_049041767.1 | DUF1367 family protein | - |
| HV039_RS14275 () | 2938161..2938415 | - | 255 | WP_049041769.1 | hypothetical protein | - |
| HV039_RS14280 () | 2938415..2938672 | - | 258 | WP_049041771.1 | DNA polymerase III subunit theta | - |
| HV039_RS14285 () | 2938672..2938998 | - | 327 | WP_049041775.1 | hypothetical protein | - |
| HV039_RS14290 () | 2939092..2939952 | - | 861 | WP_103283917.1 | Lar family restriction alleviation protein | - |
| HV039_RS14295 () | 2939949..2940368 | - | 420 | WP_049041799.1 | HNH endonuclease | - |
| HV039_RS14300 () | 2940370..2940666 | - | 297 | WP_053089138.1 | ead/Ea22-like family protein | - |
| HV039_RS14305 () | 2940663..2940890 | - | 228 | WP_049041802.1 | hypothetical protein | - |
| HV039_RS14310 () | 2940887..2941432 | - | 546 | WP_049041805.1 | hypothetical protein | - |
| HV039_RS14315 () | 2941429..2941740 | - | 312 | WP_049041807.1 | hypothetical protein | - |
| HV039_RS14320 () | 2941759..2942508 | - | 750 | WP_049041809.1 | ATP-binding protein | - |
| HV039_RS14325 () | 2942511..2943458 | - | 948 | WP_016156235.1 | hypothetical protein | - |
| HV039_RS14330 () | 2943626..2944165 | - | 540 | WP_049041812.1 | toxin YdaT domain-containing protein | - |
| HV039_RS14335 () | 2944196..2944423 | - | 228 | WP_016156713.1 | hypothetical protein | - |
| HV039_RS14340 () | 2944492..2945214 | + | 723 | WP_049041815.1 | helix-turn-helix transcriptional regulator | - |
| HV039_RS14345 () | 2945382..2946176 | + | 795 | Protein_2816 | hypothetical protein | - |
| HV039_RS14350 () | 2946320..2947300 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| HV039_RS14355 () | 2947326..2947505 | + | 180 | WP_181500364.1 | hypothetical protein | - |
| HV039_RS14360 () | 2947596..2947976 | + | 381 | WP_049041820.1 | lipoprotein | - |
| HV039_RS14365 () | 2948008..2948214 | - | 207 | WP_172625561.1 | hypothetical protein | - |
| HV039_RS14370 () | 2948462..2948731 | + | 270 | WP_016247087.1 | hypothetical protein | - |
| HV039_RS14375 () | 2948712..2949005 | - | 294 | WP_049041823.1 | hypothetical protein | - |
| HV039_RS14380 () | 2949185..2949391 | + | 207 | WP_001568763.1 | hypothetical protein | - |
| HV039_RS14385 () | 2949403..2949564 | + | 162 | WP_049259698.1 | hypothetical protein | - |
| HV039_RS14390 () | 2949704..2952577 | + | 2874 | WP_049040225.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HV039_RS14395 () | 2952592..2953632 | + | 1041 | WP_049040226.1 | recombinase RecT | - |
| HV039_RS14400 () | 2953667..2954011 | + | 345 | WP_049040227.1 | hypothetical protein | - |
| HV039_RS14405 () | 2954004..2954630 | + | 627 | WP_049040228.1 | morphogenetic protein | - |
| HV039_RS14410 () | 2954617..2954859 | + | 243 | WP_005121071.1 | DUF4060 family protein | - |
| HV039_RS14415 () | 2954924..2955196 | + | 273 | WP_049040229.1 | excisionase | - |
| HV039_RS14420 () | 2955165..2956250 | + | 1086 | WP_049040230.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2956324..2956466 | + | 143 | - | - | Antitoxin Detail |
| - () | 2956328..2956431 | - | 104 | - | - | Toxin Detail |
| HV039_RS14425 () | 2956587..2956925 | - | 339 | WP_003833793.1 | YebY family protein | - |
| HV039_RS14430 () | 2956946..2957818 | - | 873 | WP_103283918.1 | copper homeostasis membrane protein CopD | - |
| HV039_RS14435 () | 2957822..2958196 | - | 375 | WP_103283919.1 | CopC domain-containing protein YobA | - |
| HV039_RS14440 () | 2958340..2958570 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV039_RS14445 () | 2958677..2959333 | + | 657 | WP_016156222.1 | carbon-nitrogen hydrolase family protein | - |
| HV039_RS14450 () | 2959357..2960019 | + | 663 | WP_016152773.1 | exodeoxyribonuclease X | - |
| HV039_RS14455 () | 2960016..2962076 | - | 2061 | WP_181022921.1 | oligopeptidase B | - |
| HV039_RS14460 () | 2962163..2962822 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| HV039_RS14465 () | 2962923..2963276 | - | 354 | WP_016152770.1 | hypothetical protein | - |
| HV039_RS14470 () | 2963398..2963688 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| HV039_RS14475 () | 2963821..2964999 | + | 1179 | WP_016156219.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV039_RS14480 () | 2965066..2965707 | - | 642 | WP_016152768.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV039_RS14485 () | 2965742..2967553 | - | 1812 | WP_016152767.1 | phosphogluconate dehydratase | - |
| HV039_RS14490 () | 2967786..2969261 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| HV039_RS14495 () | 2969630..2970499 | + | 870 | WP_019076523.1 | MurR/RpiR family transcriptional regulator | - |
| HV039_RS14500 () | 2970618..2972060 | + | 1443 | WP_016152765.1 | pyruvate kinase | - |
| HV039_RS14505 () | 2972105..2973076 | - | 972 | WP_016152764.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HV039_RS14510 () | 2973196..2974515 | - | 1320 | WP_016152763.1 | murein DD-endopeptidase MepM | - |
| HV039_RS14515 () | 2974531..2975475 | - | 945 | WP_019076521.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV039_RS14520 () | 2975554..2976309 | + | 756 | WP_016152761.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV039_RS14525 () | 2976306..2977091 | + | 786 | WP_016152760.1 | hypothetical protein | VF |
| HV039_RS14530 () | 2977908..2979566 | - | 1659 | Protein_2853 | hypothetical protein | VF |
| HV039_RS14535 () | 2979568..2980482 | - | 915 | Protein_2854 | IS30 family transposase IS30D | Transposase |
| HV039_RS14540 () | 2980580..2981983 | + | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| HV039_RS14545 () | 2982012..2982644 | - | 633 | WP_001567369.1 | hypothetical protein | - |
| HV039_RS14550 () | 2982760..2983002 | - | 243 | Protein_2857 | IS30 family transposase IS30D | Transposase |
| HV039_RS14555 () | 2982959..2984842 | - | 1884 | WP_181500110.1 | hypothetical protein | VF |
| HV039_RS14560 () | 2984839..2986056 | - | 1218 | WP_103283922.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| HV039_RS14565 () | 2986183..2986800 | - | 618 | WP_019076517.1 | LuxR family transcriptional regulator | - |
| HV039_RS14570 () | 2986797..2987249 | - | 453 | WP_019076516.1 | CaiF/GrlA family transcriptional regulator | - |
| HV039_RS14575 () | 2987606..2988280 | - | 675 | WP_103283923.1 | Tyrosine recombinase XerD | VF |
| HV039_RS14580 () | 2988429..2989271 | + | 843 | WP_019076514.1 | HTH-type transcriptional activator RhaR | VF |
| HV039_RS14585 () | 2989268..2989819 | - | 552 | WP_103283924.1 | Tyrosine recombinase XerC | VF |
| HV039_RS14590 () | 2989963..2990133 | - | 171 | WP_181022919.1 | hypothetical protein | - |
| HV039_RS14595 () | 2990132..2990358 | + | 227 | Protein_2866 | 3'-5' exoribonuclease | - |
| HV039_RS14600 () | 2990743..2991414 | + | 672 | WP_003846709.1 | Regulator of RpoS | VF |
| HV039_RS14605 () | 2991414..2992877 | + | 1464 | WP_103283925.1 | two-component system sensor histidine kinase PhoQ | - |
| HV039_RS14610 () | 2992970..2994091 | + | 1122 | WP_016152697.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| HV039_RS14615 () | 2994196..2995422 | - | 1227 | WP_047415361.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|