NZ_CP0568962893271..2991414

MGE detailed information

MGE type: Prophage        MGE length: 98144 bp
Accession: NZ_CP056896        Location: 2893271..2991414         Organism: Citrobacter sp. RHBSTW-00021       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV039_RS13995 () 2890129..2891010 - 882 WP_003034964.1 protease HtpX -
HV039_RS14000 () 2891203..2893251 - 2049 WP_103283909.1 carboxy terminal-processing peptidase -
HV039_RS14005 () 2893271..2893957 - 687 WP_003833781.1 RNA chaperone ProQ -
HV039_RS14010 () 2894054..2894551 - 498 WP_016152783.1 GAF domain-containing protein -
HV039_RS14015 () 2894680..2895963 + 1284 WP_103283910.1 membrane integrity lipid transport subunit YebS -
HV039_RS14020 () 2895932..2898565 + 2634 WP_103283911.1 hypothetical protein VF
HV039_RS14025 () 2898589..2900070 + 1482 WP_146053227.1 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF -
HV039_RS14030 () 2900171..2900407 + 237 WP_029139506.1 DUF1480 family protein -
HV039_RS14035 () 2900510..2900701 + 192 WP_016152779.1 YebW family protein -
HV039_RS14040 () 2900702..2901343 - 642 WP_047358581.1 protein-serine/threonine phosphatase -
HV039_RS14045 () 2901421..2902587 - 1167 Protein_2756 hypothetical protein -
HV039_RS14050 () 2902604..2903301 - 698 Protein_2757 IS1 family transposase -
HV039_RS14055 () 2904130..2904801 + 672 WP_049041258.1 SOS response-associated peptidase -
HV039_RS14060 () 2904794..2906062 - 1269 WP_049041262.1 Y-family DNA polymerase -
HV039_RS14065 () 2906065..2906484 - 420 WP_019078490.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HV039_RS14070 () 2906562..2906804 + 243 WP_049041271.1 DinI family protein -
HV039_RS14075 () 2906849..2908207 - 1359 WP_049041273.1 hypothetical protein -
HV039_RS14080 () 2908217..2909161 - 945 WP_181500108.1 hypothetical protein -
HV039_RS14085 () 2909161..2912409 - 3249 WP_049041277.1 host specificity protein J -
HV039_RS14090 () 2912464..2913063 - 600 WP_049041279.1 tail assembly protein -
HV039_RS14095 () 2913051..2913782 - 732 WP_049041282.1 C40 family peptidase -
HV039_RS14100 () 2913795..2914568 - 774 WP_049041285.1 phage minor tail protein L -
HV039_RS14105 () 2914577..2914927 - 351 WP_049041287.1 phage tail protein -
HV039_RS14110 () 2915189..2915551 + 363 WP_049041297.1 hypothetical protein -
HV039_RS14115 () 2915597..2915821 - 225 WP_049041291.1 hypothetical protein -
HV039_RS14120 () 2915842..2916417 + 576 WP_049041294.1 hypothetical protein -
HV039_RS14125 () 2916509..2916919 - 411 WP_175330120.1 hypothetical protein -
HV039_RS14130 () 2916982..2917206 - 225 WP_049041295.1 hypothetical protein -
HV039_RS14135 () 2917206..2920337 - 3132 WP_103283914.1 phage tail tape measure protein -
HV039_RS14140 () 2920337..2920624 - 288 WP_035895695.1 DUF1799 domain-containing protein -
HV039_RS14145 () 2920642..2920980 - 339 WP_049040904.1 hypothetical protein -
HV039_RS14150 () 2921021..2921551 - 531 WP_049040902.1 KilA-N domain-containing protein -
HV039_RS14155 () 2921768..2922700 - 933 WP_049040900.1 immunoglobulin domain-containing protein -
HV039_RS14160 () 2922747..2923196 - 450 WP_019076571.1 DUF4128 domain-containing protein -
HV039_RS14165 () 2923186..2923785 - 600 WP_049040897.1 hypothetical protein -
HV039_RS14170 () 2923787..2924140 - 354 WP_049040895.1 hypothetical protein -
HV039_RS14175 () 2924142..2924624 - 483 WP_049040893.1 hypothetical protein -
HV039_RS14180 () 2924627..2925040 - 414 WP_181631222.1 hypothetical protein -
HV039_RS14185 () 2925080..2926219 - 1140 WP_016156686.1 hypothetical protein -
HV039_RS14190 () 2926237..2926989 - 753 WP_049041726.1 hypothetical protein -
HV039_RS14195 () 2927116..2927259 - 144 WP_158655785.1 hypothetical protein -
HV039_RS14200 () 2927262..2928368 - 1107 WP_049041728.1 phage Mu F like family protein -
HV039_RS14205 () 2928370..2929773 - 1404 WP_049041730.1 DUF4055 domain-containing protein -
HV039_RS14210 () 2929778..2931349 - 1572 WP_049041731.1 terminase -
HV039_RS14215 () 2931346..2931996 - 651 WP_049041734.1 hypothetical protein -
HV039_RS14220 () 2932120..2932548 + 429 WP_049041738.1 hypothetical protein -
HV039_RS14225 () 2933058..2933330 - 273 WP_049041743.1 hypothetical protein -
HV039_RS14230 () 2933327..2933869 - 543 WP_049041746.1 glycoside hydrolase family 108 protein -
HV039_RS14235 () 2933869..2934144 - 276 WP_049041753.1 phage holin family protein -
HV039_RS14240 () 2934141..2934539 - 399 WP_049041756.1 membrane protein -
HV039_RS14245 () 2934847..2935176 - 330 WP_049041759.1 hypothetical protein -
HV039_RS14250 () 2935804..2936508 - 705 WP_049041761.1 antiterminator -
HV039_RS14255 () 2936505..2936642 - 138 WP_016156248.1 YlcG family protein -
HV039_RS14260 () 2936639..2937247 - 609 WP_103283916.1 recombination protein NinG -
HV039_RS14265 () 2937250..2937456 - 207 WP_049041776.1 hypothetical protein -
HV039_RS14270 () 2937456..2938055 - 600 WP_049041767.1 DUF1367 family protein -
HV039_RS14275 () 2938161..2938415 - 255 WP_049041769.1 hypothetical protein -
HV039_RS14280 () 2938415..2938672 - 258 WP_049041771.1 DNA polymerase III subunit theta -
HV039_RS14285 () 2938672..2938998 - 327 WP_049041775.1 hypothetical protein -
HV039_RS14290 () 2939092..2939952 - 861 WP_103283917.1 Lar family restriction alleviation protein -
HV039_RS14295 () 2939949..2940368 - 420 WP_049041799.1 HNH endonuclease -
HV039_RS14300 () 2940370..2940666 - 297 WP_053089138.1 ead/Ea22-like family protein -
HV039_RS14305 () 2940663..2940890 - 228 WP_049041802.1 hypothetical protein -
HV039_RS14310 () 2940887..2941432 - 546 WP_049041805.1 hypothetical protein -
HV039_RS14315 () 2941429..2941740 - 312 WP_049041807.1 hypothetical protein -
HV039_RS14320 () 2941759..2942508 - 750 WP_049041809.1 ATP-binding protein -
HV039_RS14325 () 2942511..2943458 - 948 WP_016156235.1 hypothetical protein -
HV039_RS14330 () 2943626..2944165 - 540 WP_049041812.1 toxin YdaT domain-containing protein -
HV039_RS14335 () 2944196..2944423 - 228 WP_016156713.1 hypothetical protein -
HV039_RS14340 () 2944492..2945214 + 723 WP_049041815.1 helix-turn-helix transcriptional regulator -
HV039_RS14345 () 2945382..2946176 + 795 Protein_2816 hypothetical protein -
HV039_RS14350 () 2946320..2947300 - 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
HV039_RS14355 () 2947326..2947505 + 180 WP_181500364.1 hypothetical protein -
HV039_RS14360 () 2947596..2947976 + 381 WP_049041820.1 lipoprotein -
HV039_RS14365 () 2948008..2948214 - 207 WP_172625561.1 hypothetical protein -
HV039_RS14370 () 2948462..2948731 + 270 WP_016247087.1 hypothetical protein -
HV039_RS14375 () 2948712..2949005 - 294 WP_049041823.1 hypothetical protein -
HV039_RS14380 () 2949185..2949391 + 207 WP_001568763.1 hypothetical protein -
HV039_RS14385 () 2949403..2949564 + 162 WP_049259698.1 hypothetical protein -
HV039_RS14390 () 2949704..2952577 + 2874 WP_049040225.1 PD-(D/E)XK nuclease-like domain-containing protein -
HV039_RS14395 () 2952592..2953632 + 1041 WP_049040226.1 recombinase RecT -
HV039_RS14400 () 2953667..2954011 + 345 WP_049040227.1 hypothetical protein -
HV039_RS14405 () 2954004..2954630 + 627 WP_049040228.1 morphogenetic protein -
HV039_RS14410 () 2954617..2954859 + 243 WP_005121071.1 DUF4060 family protein -
HV039_RS14415 () 2954924..2955196 + 273 WP_049040229.1 excisionase -
HV039_RS14420 () 2955165..2956250 + 1086 WP_049040230.1 hypothetical protein ; Integrase Integrase
- () 2956324..2956466 + 143 - - Antitoxin Detail
- () 2956328..2956431 - 104 - - Toxin Detail
HV039_RS14425 () 2956587..2956925 - 339 WP_003833793.1 YebY family protein -
HV039_RS14430 () 2956946..2957818 - 873 WP_103283918.1 copper homeostasis membrane protein CopD -
HV039_RS14435 () 2957822..2958196 - 375 WP_103283919.1 CopC domain-containing protein YobA -
HV039_RS14440 () 2958340..2958570 + 231 WP_003034925.1 DNA polymerase III subunit theta -
HV039_RS14445 () 2958677..2959333 + 657 WP_016156222.1 carbon-nitrogen hydrolase family protein -
HV039_RS14450 () 2959357..2960019 + 663 WP_016152773.1 exodeoxyribonuclease X -
HV039_RS14455 () 2960016..2962076 - 2061 WP_181022921.1 oligopeptidase B -
HV039_RS14460 () 2962163..2962822 - 660 WP_016156220.1 tellurite resistance TerB family protein -
HV039_RS14465 () 2962923..2963276 - 354 WP_016152770.1 hypothetical protein -
HV039_RS14470 () 2963398..2963688 - 291 WP_003833810.1 DNA damage-inducible protein YebG -
HV039_RS14475 () 2963821..2964999 + 1179 WP_016156219.1 formate-dependent phosphoribosylglycinamide formyltransferase -
HV039_RS14480 () 2965066..2965707 - 642 WP_016152768.1 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase -
HV039_RS14485 () 2965742..2967553 - 1812 WP_016152767.1 phosphogluconate dehydratase -
HV039_RS14490 () 2967786..2969261 - 1476 WP_003034896.1 glucose-6-phosphate dehydrogenase -
HV039_RS14495 () 2969630..2970499 + 870 WP_019076523.1 MurR/RpiR family transcriptional regulator -
HV039_RS14500 () 2970618..2972060 + 1443 WP_016152765.1 pyruvate kinase -
HV039_RS14505 () 2972105..2973076 - 972 WP_016152764.1 Lipid A biosynthesis myristoyltransferase VF
HV039_RS14510 () 2973196..2974515 - 1320 WP_016152763.1 murein DD-endopeptidase MepM -
HV039_RS14515 () 2974531..2975475 - 945 WP_019076521.1 zinc ABC transporter substrate-binding protein ZnuA -
HV039_RS14520 () 2975554..2976309 + 756 WP_016152761.1 Vitamin B12 import ATP-binding protein BtuD VF
HV039_RS14525 () 2976306..2977091 + 786 WP_016152760.1 hypothetical protein VF
HV039_RS14530 () 2977908..2979566 - 1659 Protein_2853 hypothetical protein VF
HV039_RS14535 () 2979568..2980482 - 915 Protein_2854 IS30 family transposase IS30D Transposase
HV039_RS14540 () 2980580..2981983 + 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
HV039_RS14545 () 2982012..2982644 - 633 WP_001567369.1 hypothetical protein -
HV039_RS14550 () 2982760..2983002 - 243 Protein_2857 IS30 family transposase IS30D Transposase
HV039_RS14555 () 2982959..2984842 - 1884 WP_181500110.1 hypothetical protein VF
HV039_RS14560 () 2984839..2986056 - 1218 WP_103283922.1 autotransporter strand-loop-strand O-heptosyltransferase -
HV039_RS14565 () 2986183..2986800 - 618 WP_019076517.1 LuxR family transcriptional regulator -
HV039_RS14570 () 2986797..2987249 - 453 WP_019076516.1 CaiF/GrlA family transcriptional regulator -
HV039_RS14575 () 2987606..2988280 - 675 WP_103283923.1 Tyrosine recombinase XerD VF
HV039_RS14580 () 2988429..2989271 + 843 WP_019076514.1 HTH-type transcriptional activator RhaR VF
HV039_RS14585 () 2989268..2989819 - 552 WP_103283924.1 Tyrosine recombinase XerC VF
HV039_RS14590 () 2989963..2990133 - 171 WP_181022919.1 hypothetical protein -
HV039_RS14595 () 2990132..2990358 + 227 Protein_2866 3'-5' exoribonuclease -
HV039_RS14600 () 2990743..2991414 + 672 WP_003846709.1 Regulator of RpoS VF
HV039_RS14605 () 2991414..2992877 + 1464 WP_103283925.1 two-component system sensor histidine kinase PhoQ -
HV039_RS14610 () 2992970..2994091 + 1122 WP_016152697.1 [50S ribosomal protein L16]-arginine 3-hydroxylase -
HV039_RS14615 () 2994196..2995422 - 1227 WP_047415361.1 peptidase T -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance