NZ_CP0568531..177615

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 177615 bp
Accession: NZ_CP056853        Location: 1..177615         Organism: Citrobacter freundii strain RHBSTW-00119       Replicon: plasmid pRHBSTW-00119_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV078_RS23750 () 1694..1909 + 216 WP_057102330.1 DUF2767 family protein -
HV078_RS23755 () 2229..5360 + 3132 WP_100280316.1 hypothetical protein -
HV078_RS23760 () 5469..8441 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
HV078_RS23765 () 8444..9001 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
HV078_RS23770 () 9131..9343 - 213 WP_000993245.1 DUF3330 domain-containing protein -
HV078_RS23775 () 9409..9645 - 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
HV078_RS23780 () 9642..10007 - 366 WP_001277463.1 mercury resistance co-regulator MerD -
HV078_RS23785 () 10025..11707 - 1683 WP_000281123.1 mercury(II) reductase -
HV078_RS23790 () 11746..12153 - 408 WP_000522993.1 organomercurial transporter MerC -
HV078_RS23795 () 12181..12456 - 276 WP_000732276.1 mercury resistance system periplasmic binding protein MerP -
HV078_RS23800 () 12472..12822 - 351 WP_001294660.1 mercuric transport protein MerT -
HV078_RS23805 () 12894..13349 + 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
HV078_RS23810 () 13770..14066 - 297 WP_057102331.1 hypothetical protein -
HV078_RS23815 () 14164..14916 - 753 WP_072143974.1 conjugal transfer protein TraX -
HV078_RS23820 () 15351..15845 - 495 WP_057102333.1 hypothetical protein -
HV078_RS23825 () 15883..16389 - 507 WP_057102334.1 thermonuclease family protein -
HV078_RS23830 () 16561..16965 + 405 Protein_17 recombinase family protein -
HV078_RS23835 () 17093..18226 - 1134 WP_057102335.1 permease -
HV078_RS23840 () 18332..18655 + 324 WP_001175593.1 helix-turn-helix domain-containing protein -
HV078_RS23845 () 18756..19466 + 711 WP_057102336.1 arsenical resistance protein ArsH -
HV078_RS23850 () 19475..20020 + 546 WP_057102337.1 sigma-70 family RNA polymerase sigma factor -
HV078_RS23855 () 20096..20458 + 363 WP_057102338.1 arsenic metallochaperone ArsD family protein -
HV078_RS23860 () 20485..22236 + 1752 WP_023171140.1 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein VF
HV078_RS23865 () 22310..22678 - 369 WP_011117601.1 winged helix-turn-helix domain-containing protein -
HV078_RS23870 () 22741..23553 - 813 WP_011117600.1 sulfite exporter TauE/SafE family protein -
HV078_RS23875 () 23765..24301 + 537 WP_032288325.1 GNAT family N-acetyltransferase -
HV078_RS23880 () 24337..24762 - 426 WP_057102339.1 glutaredoxin-dependent arsenate reductase -
HV078_RS23885 () 24775..26064 - 1290 WP_011117597.1 arsenite efflux transporter membrane subunit ArsB -
HV078_RS23890 () 26112..27863 - 1752 WP_057102340.1 arsenite efflux transporter ATPase subunit ArsA -
HV078_RS23895 () 27881..28243 - 363 WP_057102341.1 arsenite efflux transporter metallochaperone ArsD -
HV078_RS23900 () 28290..28643 - 354 WP_077757418.1 transcriptional regulator -
HV078_RS23905 () 28827..29597 + 771 WP_058805867.1 4Fe-4S dicluster domain-containing protein -
HV078_RS23910 () 29601..30608 + 1008 WP_057102343.1 hypothetical protein -
HV078_RS23915 () 30605..33631 + 3027 WP_057102344.1 molybdopterin-dependent oxidoreductase -
HV078_RS23920 () 33641..34222 + 582 WP_057102345.1 hypothetical protein -
HV078_RS23925 () 34342..34776 - 435 WP_057102346.1 dual specificity protein phosphatase family protein -
HV078_RS23930 () 36279..36452 + 174 WP_156485358.1 hypothetical protein -
HV078_RS23935 () 36684..36908 - 225 WP_057102348.1 hypothetical protein -
HV078_RS23940 () 37018..37497 - 480 WP_057102352.1 arsenate reductase ArsC -
HV078_RS23945 () 37502..37873 - 372 WP_057103093.1 helix-turn-helix domain-containing protein -
HV078_RS23950 () 37980..39416 + 1437 WP_057102349.1 glutathione synthase -
HV078_RS23955 () 40129..41166 + 1038 WP_057064850.1 hypothetical protein -
HV078_RS23960 () 41289..42086 - 798 WP_001750026.1 IS21 family transposase ISEc62 Transposase
HV078_RS23965 () 42086..43258 - 1173 WP_057064851.1 IS21 family transposase IS21 Transposase
HV078_RS23970 () 43629..44591 - 963 WP_057064852.1 hypothetical protein -
HV078_RS23975 () 44588..44851 - 264 WP_057064853.1 hypothetical protein -
HV078_RS23980 () 45165..45344 + 180 WP_004118349.1 type II toxin-antitoxin system ParD family antitoxin -
HV078_RS23985 () 45331..45628 + 298 Protein_48 type II toxin-antitoxin system RelE/ParE family toxin -
HV078_RS23990 () 45807..46241 - 435 WP_131334081.1 copper-binding protein -
HV078_RS23995 () 46457..47857 - 1401 WP_057064175.1 copper resistance membrane spanning protein PcoS -
HV078_RS24000 () 47854..48534 - 681 WP_001188930.1 Regulator of RpoS VF
HV078_RS24005 () 48589..49518 - 930 WP_057064176.1 copper resistance inner membrane protein PcoD -
HV078_RS24010 () 49523..49903 - 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
HV078_RS24015 () 49943..50833 - 891 WP_074133539.1 copper resistance outer membrane transporter PcoB -
HV078_RS24020 () 50839..52656 - 1818 WP_000925242.1 multicopper oxidase PcoA -
HV078_RS24025 () 52891..53340 + 450 WP_001023257.1 copper resistance protein -
HV078_RS24030 () 53629..54366 + 738 WP_000287501.1 hypothetical protein VF
HV078_RS24035 () 54400..54597 - 198 WP_000843494.1 DUF2933 domain-containing protein -
HV078_RS24040 () 54638..57085 - 2448 WP_057064177.1 Ag(+)-translocating P-type ATPase SilP -
HV078_RS24045 () 57212..57652 - 441 WP_000758228.1 hypothetical protein -
HV078_RS24050 () 57739..60885 - 3147 WP_000574029.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
HV078_RS24055 () 60896..62188 - 1293 WP_000157620.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
HV078_RS24060 () 62302..62655 - 354 WP_008786772.1 cation efflux system protein CusF -
HV078_RS24065 () 62684..64069 - 1386 WP_038633711.1 hypothetical protein VF
HV078_RS24070 () 64259..64939 + 681 WP_038633715.1 Regulator of RpoS VF
HV078_RS24075 () 64932..66407 + 1476 WP_057064178.1 copper/silver sensor histidine kinase SilS -
HV078_RS24080 () 66653..67084 + 432 WP_053263389.1 hypothetical protein -
HV078_RS24085 () 67230..67580 + 351 WP_007871800.1 DUF305 domain-containing protein -
HV078_RS24090 () 67988..68896 - 909 WP_007374408.1 HNH endonuclease -
HV078_RS24095 () 70313..70732 + 420 WP_057064180.1 hypothetical protein -
HV078_RS24100 () 70779..71201 + 423 WP_057064181.1 hypothetical protein -
HV078_RS24105 () 71198..71980 + 783 WP_057064182.1 site-specific integrase -
HV078_RS24110 () 72463..73749 - 1287 WP_057064183.1 DUF1173 family protein -
HV078_RS24115 () 73969..74595 + 627 WP_008322831.1 ParA family protein -
HV078_RS24120 () 74637..74864 + 228 WP_008322833.1 hypothetical protein -
HV078_RS24125 () 75386..76138 - 753 WP_057064184.1 replication initiation protein RepE -
HV078_RS24130 () 76584..77858 - 1275 WP_057064185.1 Y-family DNA polymerase -
HV078_RS24135 () 77858..78280 - 423 WP_057064186.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HV078_RS24140 () 78572..79525 + 954 WP_057064187.1 plasmid segregation protein ParM -
HV078_RS24145 () 79531..79905 + 375 WP_057064188.1 plasmid partitioning/stability family protein -
HV078_RS24150 () 79907..80236 + 330 WP_057064189.1 hypothetical protein -
HV078_RS24155 () 80706..81641 + 936 WP_057064190.1 DUF1281 domain-containing protein -
HV078_RS24160 () 81674..82021 + 348 WP_057064191.1 hypothetical protein -
HV078_RS24165 () 82398..83078 + 681 WP_057064192.1 DNA methylase -
HV078_RS24170 () 83078..83299 + 222 WP_057064193.1 hypothetical protein -
HV078_RS24175 () 83344..83763 + 420 WP_057064194.1 DUF1380 domain-containing protein -
HV078_RS24180 () 83816..84595 + 780 WP_057064195.1 hypothetical protein -
HV078_RS24185 () 84994..85422 + 429 WP_057064196.1 antirestriction protein -
HV078_RS24190 () 85489..85911 + 423 WP_071886886.1 DUF1380 family protein -
HV078_RS24195 () 85956..86366 + 411 WP_057064197.1 hypothetical protein -
HV078_RS24200 () 86380..86571 + 192 WP_057064198.1 hypothetical protein -
HV078_RS24205 () 86743..87097 + 355 Protein_92 DNA polymerase III subunit theta -
HV078_RS24210 () 87043..87207 + 165 WP_181642385.1 hypothetical protein -
HV078_RS24215 () 87785..88012 + 228 WP_057064199.1 hypothetical protein -
HV078_RS24220 () 88106..88333 + 228 WP_057064200.1 hypothetical protein -
HV078_RS24225 () 88390..89772 + 1383 WP_057064201.1 DUF3560 domain-containing protein -
HV078_RS24230 () 89819..90382 + 564 WP_057064202.1 class I SAM-dependent methyltransferase -
HV078_RS24235 () 91133..91408 + 276 WP_057064204.1 hypothetical protein -
HV078_RS24240 () 91462..91818 + 357 WP_165410135.1 hypothetical protein -
HV078_RS24245 () 91887..93905 + 2019 WP_057064206.1 ParB/RepB/Spo0J family partition protein -
HV078_RS24250 () 93941..94375 + 435 WP_057064207.1 conjugation system SOS inhibitor PsiB -
HV078_RS24255 () 94372..95094 + 723 WP_057064208.1 plasmid SOS inhibition protein A -
HV078_RS24260 () 95097..95423 + 327 WP_057102321.1 hypothetical protein -
- () 95472..95596 + 125 NuclAT_0 - -
- () 95472..95596 + 125 NuclAT_0 - -
- () 95472..95596 + 125 NuclAT_0 - -
- () 95472..95596 + 125 NuclAT_0 - -
HV078_RS24265 () 95701..95988 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
HV078_RS24270 () 95988..96227 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
HV078_RS24275 () 96490..97413 - 924 WP_000167917.1 cation diffusion facilitator family transporter -
HV078_RS24280 () 97613..98185 - 573 WP_001515348.1 cytochrome b/b6 domain-containing protein -
HV078_RS24285 () 98692..99852 + 1161 WP_032949009.1 IS30 family transposase ISCfr4 Transposase
HV078_RS24290 () 100051..101391 - 1341 WP_058671058.1 ISNCY family transposase ISCARN112 Transposase
HV078_RS24295 () 101479..101637 + 159 WP_023228551.1 type I toxin-antitoxin system Hok family toxin -
HV078_RS24300 () 101680..101859 + 180 WP_131334174.1 hypothetical protein -
HV078_RS24305 () 102432..102650 + 219 WP_131334168.1 hypothetical protein -
HV078_RS24310 () 102676..102984 + 309 WP_131334167.1 hypothetical protein -
HV078_RS24315 () 103018..103302 + 285 WP_131334166.1 hypothetical protein -
HV078_RS24320 () 103486..103812 + 327 WP_131334165.1 hypothetical protein -
HV078_RS24325 () 104686..105255 + 570 WP_131334159.1 single-stranded DNA-binding protein -
HV078_RS24330 () 105612..105770 + 159 WP_079897042.1 type I toxin-antitoxin system Hok family toxin -
HV078_RS24335 () 105813..105992 + 180 WP_131403754.1 hypothetical protein -
HV078_RS24340 () 106551..106844 + 294 WP_061548396.1 hypothetical protein -
HV078_RS24345 () 106856..107677 + 822 WP_061548395.1 DUF945 domain-containing protein -
HV078_RS24350 () 107707..108240 - 534 WP_061548394.1 hypothetical protein VF
HV078_RS24355 () 108895..109287 + 393 WP_100280319.1 relaxosome protein TraM -
HV078_RS24360 () 109319..109960 - 642 WP_061548344.1 Arc family DNA-binding protein -
HV078_RS24365 () 110159..110512 + 354 WP_061548345.1 conjugal transfer protein TraA -
HV078_RS24370 () 110515..110817 + 303 WP_061548346.1 type IV conjugative transfer system protein TraL -
HV078_RS24375 () 110823..111407 + 585 WP_061548347.1 conjugal transfer protein TraE -
HV078_RS24380 () 111419..112159 + 741 WP_061548348.1 type-F conjugative transfer system secretin TraK -
HV078_RS24385 () 112156..113565 + 1410 WP_061548349.1 conjugal transfer protein TraB -
HV078_RS24390 () 113571..114074 + 504 WP_131403647.1 hypothetical protein -
HV078_RS24395 () 114156..114713 + 558 WP_061548351.1 type IV conjugative transfer system lipoprotein TraV -
HV078_RS24400 () 114710..114895 + 186 WP_061548352.1 hypothetical protein -
HV078_RS24405 () 114892..117495 + 2604 WP_061548353.1 type IV secretion system protein TraC -
HV078_RS24410 () 117492..117908 + 417 WP_061548354.1 type-F conjugative transfer system protein TrbI -
HV078_RS24415 () 117905..118540 + 636 WP_057102324.1 type-F conjugative transfer system protein TraW -
HV078_RS24420 () 118537..118857 + 321 WP_057102325.1 hypothetical protein -
HV078_RS24425 () 118848..119315 + 468 WP_057102326.1 hypothetical protein -
HV078_RS24430 () 119296..119496 + 201 WP_057102327.1 hypothetical protein -
HV078_RS24435 () 119594..119815 + 222 WP_057102328.1 hypothetical protein -
HV078_RS24440 () 119864..120187 + 324 WP_057102329.1 hypothetical protein -
HV078_RS24445 () 120184..121176 + 993 WP_061548355.1 conjugal transfer pilus assembly protein TraU -
HV078_RS24450 () 121187..121807 + 621 WP_061548356.1 type-F conjugative transfer system pilin assembly protein TrbC -
HV078_RS24455 () 121804..123678 + 1875 WP_100280313.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HV078_RS24460 () 123675..124457 + 783 WP_061548431.1 type-F conjugative transfer system pilin assembly protein TraF -
HV078_RS24465 () 124468..124938 + 471 WP_057064239.1 hypothetical protein -
HV078_RS24470 () 125153..125752 + 600 WP_057064240.1 F-type conjugal transfer protein TrbB -
HV078_RS24475 () 125770..126039 + 270 WP_057064241.1 hypothetical protein -
HV078_RS24480 () 126032..127396 + 1365 WP_057064242.1 conjugal transfer protein TraH -
HV078_RS24485 () 127396..128925 + 1530 Protein_148 conjugal transfer mating pair stabilization protein TraG -
HV078_RS24490 () 129031..129591 - 561 WP_016236592.1 Tn3 family transposase TnpR_ISPa38 Transposase
HV078_RS24495 () 129807..130238 - 432 WP_047389468.1 tail fiber assembly protein -
HV078_RS24500 () 130672..130809 - 138 Protein_151 phage tail protein -
HV078_RS24505 () 130954..131337 - 384 Protein_152 hypothetical protein -
HV078_RS24510 () 131337..131909 - 573 WP_117061592.1 DUF2313 domain-containing protein -
HV078_RS24515 () 131906..132973 - 1068 WP_117061591.1 baseplate J/gp47 family protein -
HV078_RS24520 () 132973..133323 - 351 WP_117061590.1 phage GP46 family protein -
HV078_RS24525 () 133413..134018 - 606 WP_117061589.1 phage baseplate assembly protein V -
HV078_RS24530 () 134002..135219 - 1218 WP_117061588.1 phage tail protein -
HV078_RS24535 () 135203..136531 - 1329 WP_177712518.1 DNA circularization N-terminal domain-containing protein -
HV078_RS24540 () 136528..138696 - 2169 WP_117061586.1 phage tail tape measure protein -
HV078_RS24545 () 138831..139223 - 393 WP_117061585.1 hypothetical protein -
HV078_RS24550 () 139224..139598 - 375 WP_023311695.1 hypothetical protein -
HV078_RS24555 () 139612..141030 - 1419 WP_117061584.1 phage tail sheath subtilisin-like domain-containing protein -
HV078_RS24560 () 141017..141238 - 222 WP_117061583.1 hypothetical protein -
HV078_RS24565 () 141225..141884 - 660 WP_117061582.1 DUF1834 family protein -
HV078_RS24570 () 141884..142312 - 429 WP_117061581.1 DUF1320 family protein -
HV078_RS24575 () 142316..142723 - 408 WP_117061580.1 hypothetical protein -
HV078_RS24580 () 142723..143631 - 909 WP_000906837.1 Mu-like prophage major head subunit gpT family protein -
HV078_RS24585 () 143645..144037 - 393 WP_000373840.1 hypothetical protein -
HV078_RS24590 () 144049..145164 - 1116 WP_117061579.1 phage protease -
HV078_RS24595 () 145220..145429 - 210 WP_024238605.1 hypothetical protein -
HV078_RS24600 () 145546..146088 - 543 WP_038637825.1 phage virion morphogenesis protein -
HV078_RS24605 () 146085..147344 - 1260 WP_117061578.1 minor capsid protein -
HV078_RS24610 () 147331..148899 - 1569 WP_117061577.1 DUF935 domain-containing protein -
HV078_RS24615 () 148902..150554 - 1653 WP_117061576.1 phage terminase large subunit -
HV078_RS24620 () 150559..150768 - 210 WP_117061575.1 hypothetical protein -
HV078_RS24625 () 150761..151261 - 501 WP_038637812.1 DUF1804 family protein -
HV078_RS24630 () 151263..151547 - 285 WP_117061574.1 hypothetical protein -
HV078_RS24635 () 151544..151786 - 243 WP_117061595.1 hypothetical protein -
HV078_RS24640 () 151795..152427 - 633 WP_117061594.1 OmpH family outer membrane protein -
HV078_RS24645 () 152393..152656 - 264 WP_023063181.1 DUF2644 domain-containing protein -
HV078_RS24650 () 152653..153297 - 645 WP_023311911.1 glycoside hydrolase family 19 protein -
HV078_RS24655 () 153376..153882 - 507 WP_063930091.1 hypothetical protein -
HV078_RS24660 () 153882..154316 - 435 WP_063930102.1 hypothetical protein -
HV078_RS24665 () 154261..154737 - 477 WP_074168523.1 regulatory protein GemA -
HV078_RS24670 () 154799..155014 - 216 WP_074168549.1 hypothetical protein -
HV078_RS24675 () 155192..155407 - 216 WP_063930219.1 hypothetical protein -
HV078_RS24680 () 155400..155765 - 366 WP_063930220.1 DUF4406 domain-containing protein -
HV078_RS24685 () 155758..156339 - 582 WP_063930221.1 hypothetical protein -
HV078_RS24690 () 156336..157061 - 726 WP_117061573.1 DUF2786 domain-containing protein -
HV078_RS24695 () 157066..157512 - 447 WP_063930223.1 hypothetical protein -
HV078_RS24700 () 157594..157785 - 192 WP_032663812.1 hypothetical protein -
HV078_RS24705 () 157775..158008 - 234 WP_063930224.1 ANR family transcriptional regulator -
HV078_RS24710 () 158010..158654 - 645 WP_063930225.1 DUF3164 family protein -
HV078_RS24715 () 158644..158850 - 207 WP_063930226.1 hypothetical protein -
HV078_RS24720 () 158863..159141 - 279 WP_063930227.1 hypothetical protein -
HV078_RS24725 () 159162..160055 - 894 WP_061548759.1 AAA family ATPase -
HV078_RS24730 () 160101..162158 - 2058 WP_181642384.1 IS481 family transposase ISMav5 Transposase
HV078_RS24735 () 162177..162443 - 267 WP_063930228.1 helix-turn-helix domain-containing protein -
HV078_RS24740 () 162592..163140 + 549 WP_063930229.1 helix-turn-helix domain-containing protein -
HV078_RS24745 () 163610..165343 + 1734 WP_181642383.1 hypothetical protein -
HV078_RS24750 () 165358..165927 + 570 WP_131334063.1 hypothetical protein -
HV078_RS24755 () 166232..166963 + 732 WP_057064245.1 complement resistance protein TraT -
HV078_RS24760 () 167015..167356 + 342 WP_061548330.1 hypothetical protein -
HV078_RS24765 () 167353..167664 - 312 WP_057064246.1 CcdB family protein -
HV078_RS24770 () 167661..167909 - 249 WP_049271083.1 type II toxin-antitoxin system CcdA family antitoxin -
HV078_RS24775 () 168121..170691 + 2571 WP_057064248.1 type IV conjugative transfer system coupling protein TraD -
HV078_RS24780 () 170688..176111 + 5424 WP_061548329.1 ATP-dependent RecD-like DNA helicase Relaxase
HV078_RS24785 () 176145..176927 + 783 WP_100280314.1 DsbA family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance