MGE detailed information
MGE type: Genomic_island MGE length: 38848 bp
Accession: NZ_CP056852 Location: 1280594..1319441 Organism: Citrobacter freundii strain RHBSTW-00119 Replicon: chromosome
Accession: NZ_CP056852 Location: 1280594..1319441 Organism: Citrobacter freundii strain RHBSTW-00119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV078_RS06135 () | 1276327..1279869 | - | 3543 | WP_032949841.1 | inverse autotransporter beta domain-containing protein | - |
| HV078_RS06140 () | 1280594..1280923 | - | 330 | WP_057064441.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV078_RS06145 () | 1280944..1281261 | - | 318 | WP_007870247.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV078_RS06150 () | 1281279..1281500 | - | 222 | WP_001548165.1 | DUF987 domain-containing protein | - |
| HV078_RS06155 () | 1281509..1281985 | - | 477 | WP_057064440.1 | RadC family protein | - |
| HV078_RS06160 () | 1282001..1282480 | - | 480 | WP_081014411.1 | antirestriction protein | - |
| HV078_RS06165 () | 1283334..1285529 | - | 2196 | WP_143113983.1 | DEAD/DEAH box helicase | - |
| HV078_RS06170 () | 1285526..1286842 | - | 1317 | WP_143113982.1 | ATP-binding protein | - |
| HV078_RS06175 () | 1286846..1289155 | - | 2310 | WP_143113981.1 | TerB N-terminal domain-containing protein | - |
| HV078_RS06180 () | 1289684..1290652 | + | 969 | WP_143113980.1 | phage exclusion protein | - |
| HV078_RS06185 () | 1290954..1291421 | - | 468 | WP_181642284.1 | hypothetical protein | - |
| HV078_RS06190 () | 1291446..1291889 | - | 444 | WP_143113979.1 | hypothetical protein | - |
| HV078_RS06195 () | 1291889..1292133 | - | 245 | Protein_1213 | hypothetical protein | - |
| HV078_RS06200 () | 1292174..1292875 | - | 702 | WP_143113978.1 | WYL domain-containing protein | - |
| HV078_RS06205 () | 1293092..1293913 | - | 822 | WP_143113977.1 | DUF945 domain-containing protein | - |
| HV078_RS06210 () | 1294005..1294868 | - | 864 | WP_143113976.1 | GTPase family protein | - |
| HV078_RS06215 () | 1295035..1295982 | - | 948 | WP_099433498.1 | ankyrin repeat domain-containing protein | - |
| HV078_RS06220 () | 1296458..1297180 | - | 723 | Protein_1218 | SWF/SNF helicase family protein | - |
| HV078_RS06225 () | 1297279..1297659 | + | 381 | WP_021569967.1 | IS66 family transposase ISEc8 | Transposase |
| HV078_RS06230 () | 1297656..1298003 | + | 348 | WP_021569968.1 | IS66 family transposase ISKpn24 | Transposase |
| HV078_RS06235 () | 1298053..1299591 | + | 1539 | WP_099433497.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV078_RS06240 () | 1300023..1301669 | - | 1647 | WP_021569970.1 | glucose-6-phosphate isomerase | - |
| HV078_RS06245 () | 1301943..1304531 | - | 2589 | Protein_1223 | Aldehyde-alcohol dehydrogenase | VF |
| HV078_RS06250 () | 1304854..1306011 | - | 1158 | WP_021569972.1 | glycerate kinase | - |
| HV078_RS06255 () | 1306069..1307397 | - | 1329 | WP_099433495.1 | MFS transporter | - |
| HV078_RS06260 () | 1307522..1309039 | - | 1518 | WP_024241186.1 | xylulose kinase | - |
| HV078_RS06265 () | 1309049..1310089 | - | 1041 | WP_021569975.1 | zinc-dependent dehydrogenase | - |
| HV078_RS06270 () | 1310120..1310929 | - | 810 | WP_021569976.1 | hypothetical protein | - |
| HV078_RS06275 () | 1310961..1311926 | - | 966 | WP_021569977.1 | D-2-hydroxyacid dehydrogenase | - |
| HV078_RS06280 () | 1312156..1312524 | + | 369 | Protein_1230 | DDE-type integrase/transposase/recombinase | - |
| HV078_RS06285 () | 1312681..1312851 | + | 171 | WP_126317535.1 | hypothetical protein | - |
| HV078_RS06290 () | 1312941..1313012 | + | 72 | WP_113078511.1 | hypothetical protein | - |
| HV078_RS06295 () | 1313243..1314451 | + | 1209 | WP_169328781.1 | IS256 family transposase ISEc39 | Transposase |
| HV078_RS06300 () | 1314544..1315164 | - | 621 | WP_057064095.1 | inovirus Gp2 family protein | - |
| HV078_RS06305 () | 1315405..1316760 | - | 1356 | WP_126319765.1 | DUF3987 domain-containing protein | - |
| HV078_RS06310 () | 1316925..1317137 | - | 213 | WP_001549567.1 | AlpA family transcriptional regulator | - |
| HV078_RS06315 () | 1317263..1318141 | + | 879 | WP_001549566.1 | hypothetical protein | - |
| HV078_RS06320 () | 1318200..1319441 | - | 1242 | WP_001549565.1 | Prophage integrase IntA ; Integrase | Integrase |
| HV078_RS06330 () | 1320081..1321244 | - | 1164 | WP_085951585.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HV078_RS06335 () | 1321252..1323438 | - | 2187 | WP_032949836.1 | type I secretion system permease/ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|