MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 61353 bp
Accession: NZ_CP056841 Location: 1..61353 Organism: Citrobacter freundii strain RHBSTW-00126 Replicon: plasmid pRHBSTW-00126_3
Accession: NZ_CP056841 Location: 1..61353 Organism: Citrobacter freundii strain RHBSTW-00126 Replicon: plasmid pRHBSTW-00126_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV083_RS23890 () | 1491..1733 | + | 243 | WP_000124732.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HV083_RS23895 () | 1726..2010 | + | 285 | WP_000277490.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HV083_RS23900 () | 2148..2240 | - | 93 | Protein_3 | DNA partition complex ParG | - |
| HV083_RS23905 () | 2746..3078 | - | 333 | Protein_4 | glycogen/starch synthase | - |
| HV083_RS23910 () | 3078..4376 | - | 1299 | WP_053287384.1 | glucose-1-phosphate adenylyltransferase | - |
| HV083_RS23915 () | 4391..6367 | - | 1977 | WP_046810948.1 | glycogen debranching protein GlgX | - |
| HV083_RS23920 () | 6367..8550 | - | 2184 | WP_032945237.1 | 1,4-alpha-glucan branching enzyme | - |
| HV083_RS23925 () | 8738..9877 | - | 1140 | WP_048227242.1 | ISAs1 family transposase | - |
| HV083_RS23930 () | 10049..10864 | - | 816 | Protein_9 | IS110 family transposase | - |
| HV083_RS23935 () | 11203..11667 | - | 465 | WP_001243598.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| HV083_RS23940 () | 11913..13571 | - | 1659 | WP_000706606.1 | FAD-dependent oxidoreductase | - |
| HV083_RS23945 () | 13733..14083 | + | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HV083_RS23950 () | 14388..14864 | - | 477 | WP_000043177.1 | DNA starvation/stationary phase protection protein | - |
| HV083_RS23955 () | 14979..15416 | - | 438 | WP_016241611.1 | PaaI family thioesterase | - |
| HV083_RS23960 () | 15577..16038 | - | 462 | WP_000626969.1 | hypothetical protein | - |
| HV083_RS23965 () | 16013..16333 | - | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| HV083_RS23970 () | 16549..17769 | - | 1221 | WP_109544644.1 | DUF4158 domain-containing protein | - |
| HV083_RS23975 () | 17772..17966 | - | 195 | Protein_18 | Hin recombinase | - |
| HV083_RS23980 () | 18070..18273 | + | 204 | Protein_19 | PhzF family phenazine biosynthesis protein | - |
| HV083_RS23985 () | 18667..20451 | + | 1785 | WP_040119812.1 | allophanate hydrolase | - |
| HV083_RS23990 () | 20480..21586 | + | 1107 | WP_040119811.1 | BMP family ABC transporter substrate-binding protein | - |
| HV083_RS23995 () | 21596..22702 | + | 1107 | WP_047721805.1 | ABC transporter permease | - |
| HV083_RS24000 () | 22695..23615 | + | 921 | WP_040119810.1 | ABC transporter permease | - |
| HV083_RS24005 () | 23628..24632 | + | 1005 | WP_040119809.1 | formamidase | - |
| HV083_RS24010 () | 24639..25328 | + | 690 | WP_040119808.1 | cysteine hydrolase | - |
| HV083_RS24015 () | 25331..26869 | + | 1539 | WP_040119823.1 | ABC transporter ATP-binding protein | - |
| HV083_RS24020 () | 26866..27534 | + | 669 | WP_040119807.1 | cysteine hydrolase | - |
| HV083_RS24025 () | 27571..28290 | + | 720 | WP_040119806.1 | GntR family transcriptional regulator | - |
| HV083_RS24030 () | 28341..29038 | - | 698 | Protein_29 | IS1 family transposase | - |
| HV083_RS24035 () | 29108..30148 | - | 1041 | WP_181621594.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| HV083_RS24040 () | 30576..30926 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| HV083_RS24045 () | 30977..31720 | + | 744 | WP_004098973.1 | hypothetical protein | - |
| HV083_RS24050 () | 31717..32493 | + | 777 | WP_112002475.1 | site-specific integrase | - |
| HV083_RS24055 () | 32551..32808 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| HV083_RS24060 () | 32937..33041 | - | 105 | WP_064161358.1 | hypothetical protein | - |
| HV083_RS24065 () | 33576..34442 | + | 867 | WP_023302476.1 | replication initiation protein | - |
| HV083_RS24070 () | 34801..35031 | - | 231 | Protein_37 | hypothetical protein | - |
| HV083_RS24075 () | 35366..36571 | + | 1206 | WP_006797591.1 | AAA family ATPase | - |
| HV083_RS24080 () | 36571..37545 | + | 975 | WP_181574543.1 | ParB/RepB/Spo0J family partition protein | - |
| HV083_RS24085 () | 37627..38898 | - | 1272 | WP_023302472.1 | Y-family DNA polymerase | - |
| HV083_RS24090 () | 38898..39329 | - | 432 | WP_006796638.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV083_RS24095 () | 39735..41222 | + | 1488 | WP_162181324.1 | group II intron reverse transcriptase/maturase | - |
| HV083_RS24100 () | 41374..42071 | + | 698 | Protein_43 | IS1 family transposase | - |
| HV083_RS24105 () | 42081..42389 | + | 309 | Protein_44 | replication initiation protein | - |
| HV083_RS24110 () | 43335..44207 | + | 873 | Protein_45 | IS5 family transposase | - |
| HV083_RS24115 () | 44259..44963 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HV083_RS24120 () | 45259..45549 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| HV083_RS24125 () | 45546..45947 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| HV083_RS24130 () | 45937..46293 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| HV083_RS24135 () | 46548..46874 | + | 327 | WP_003100858.1 | hypothetical protein | - |
| HV083_RS24140 () | 46871..47371 | + | 501 | WP_003100856.1 | hypothetical protein | - |
| HV083_RS24145 () | 47368..47739 | + | 372 | WP_003100853.1 | hypothetical protein | - |
| HV083_RS24150 () | 47733..48290 | + | 558 | WP_003100847.1 | recombinase family protein | - |
| HV083_RS24155 () | 48369..49373 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| HV083_RS24160 () | 49648..49854 | - | 207 | Protein_55 | transposase | - |
| HV083_RS24165 () | 49878..50264 | - | 387 | Protein_56 | Tn3 family transposase | - |
| HV083_RS24170 () | 50892..51227 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| HV083_RS24175 () | 51400..51681 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| HV083_RS24180 () | 51909..53081 | + | 1173 | WP_057064851.1 | IS21 family transposase | - |
| HV083_RS24185 () | 53081..53878 | + | 798 | WP_001750026.1 | IS21-like element helper ATPase IstB | - |
| HV083_RS24190 () | 53897..54481 | + | 585 | Protein_61 | DUF2913 family protein | - |
| HV083_RS24195 () | 54478..54639 | - | 162 | WP_011977825.1 | hypothetical protein | - |
| HV083_RS24200 () | 54666..55658 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| HV083_RS24205 () | 55707..55862 | - | 156 | WP_000075580.1 | hypothetical protein | - |
| HV083_RS24210 () | 56003..56707 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HV083_RS24215 () | 56959..57231 | - | 273 | Protein_66 | IS1 family transposase | - |
| HV083_RS24220 () | 57360..58763 | + | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| HV083_RS24225 () | 58797..60011 | - | 1215 | WP_005012528.1 | type II site-specific deoxyribonuclease | - |
| HV083_RS24230 () | 60123..60524 | + | 402 | Protein_69 | IS6-like element IS26 family transposase | - |
| HV083_RS24235 () | 60590..61294 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|