MGE detailed information
MGE type: Prophage MGE length: 91868 bp
Accession: NZ_CP056839 Location: 2744398..2836265 Organism: Citrobacter freundii strain RHBSTW-00126 Replicon: chromosome
Accession: NZ_CP056839 Location: 2744398..2836265 Organism: Citrobacter freundii strain RHBSTW-00126 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV083_RS13205 () | 2740106..2740564 | + | 459 | WP_003021010.1 | DUF986 family protein | - |
| HV083_RS13210 () | 2740997..2741563 | + | 567 | WP_003021013.1 | manganese efflux pump MntP | - |
| HV083_RS13215 () | 2741560..2742369 | - | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV083_RS13220 () | 2742433..2744178 | - | 1746 | WP_003021017.1 | peptidoglycan glycosyltransferase FtsI | - |
| HV083_RS13225 () | 2744398..2744607 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV083_RS13230 () | 2744620..2744763 | - | 144 | WP_003034983.1 | YobF family protein | - |
| HV083_RS13235 () | 2745400..2745684 | - | 285 | WP_003034980.1 | YebO family protein | - |
| HV083_RS13240 () | 2745759..2745902 | - | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| HV083_RS13245 () | 2746067..2746306 | + | 240 | WP_003034975.1 | membrane protein | - |
| HV083_RS13250 () | 2746421..2747212 | - | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| HV083_RS13255 () | 2747387..2748760 | + | 1374 | WP_032949472.1 | MFS transporter | - |
| HV083_RS13260 () | 2748807..2749688 | - | 882 | WP_003034964.1 | protease HtpX | - |
| HV083_RS13265 () | 2749881..2751929 | - | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| HV083_RS13270 () | 2751949..2752635 | - | 687 | WP_048217913.1 | RNA chaperone ProQ | - |
| HV083_RS13275 () | 2752732..2753229 | - | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| HV083_RS13280 () | 2753358..2754641 | + | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| HV083_RS13285 () | 2754610..2757243 | + | 2634 | WP_048217915.1 | hypothetical protein | VF |
| HV083_RS13290 () | 2757323..2758744 | + | 1422 | WP_071667640.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV083_RS13295 () | 2758845..2759081 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV083_RS13300 () | 2759184..2759375 | + | 192 | WP_003034941.1 | YebW family protein | - |
| HV083_RS13305 () | 2759376..2759999 | - | 624 | WP_181621560.1 | protein-serine/threonine phosphatase | - |
| HV083_RS13310 () | 2760069..2761216 | + | 1148 | WP_113772681.1 | IS3 family transposase ISEhe3 | Transposase |
| HV083_RS13315 () | 2761590..2761688 | + | 99 | WP_072211991.1 | DinI-like family protein | - |
| HV083_RS13320 () | 2761801..2762472 | + | 672 | WP_016150083.1 | SOS response-associated peptidase | - |
| HV083_RS13325 () | 2762596..2762970 | + | 375 | WP_016150400.1 | hypothetical protein | - |
| HV083_RS13330 () | 2763339..2766458 | + | 3120 | WP_181621029.1 | DEAD/DEAH box helicase family protein | - |
| HV083_RS13340 () | 2767702..2769423 | + | 1722 | WP_181621562.1 | hypothetical protein | - |
| HV083_RS13345 () | 2769950..2770441 | - | 492 | WP_049016059.1 | GNAT family N-acetyltransferase | - |
| HV083_RS13350 () | 2770578..2771549 | + | 972 | WP_065230385.1 | LysR family transcriptional regulator | - |
| HV083_RS13360 () | 2771909..2772298 | - | 390 | WP_032949482.1 | DNA polymerase V | - |
| HV083_RS13365 () | 2772445..2772525 | + | 81 | Protein_2618 | DinI family protein | - |
| HV083_RS13370 () | 2772619..2772861 | + | 243 | WP_032949485.1 | DinI family protein | - |
| HV083_RS13375 () | 2773040..2774023 | + | 984 | WP_181621032.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| HV083_RS13380 () | 2774096..2774692 | - | 597 | WP_181621034.1 | tail fiber assembly protein | - |
| HV083_RS13385 () | 2774692..2777397 | - | 2706 | WP_181621036.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV083_RS13390 () | 2777438..2780842 | - | 3405 | WP_181621038.1 | host specificity protein J | - |
| HV083_RS13395 () | 2780915..2781592 | - | 678 | WP_071667542.1 | tail assembly protein | - |
| HV083_RS13400 () | 2781490..2782224 | - | 735 | WP_071667541.1 | C40 family peptidase | - |
| HV083_RS13405 () | 2782236..2782931 | - | 696 | WP_071667540.1 | phage minor tail protein L | - |
| HV083_RS13410 () | 2782940..2783272 | - | 333 | WP_032949490.1 | phage tail protein | - |
| HV083_RS13415 () | 2783273..2786575 | - | 3303 | WP_181621049.1 | phage tail tape measure protein | - |
| HV083_RS13420 () | 2786823..2787185 | - | 363 | WP_181621053.1 | phage tail protein | - |
| HV083_RS13425 () | 2787248..2787730 | - | 483 | WP_032949494.1 | major tail shaft subunit | - |
| HV083_RS13430 () | 2787764..2788165 | - | 402 | WP_003832376.1 | HK97 gp10 family phage protein | - |
| HV083_RS13435 () | 2788162..2788551 | - | 390 | WP_042309009.1 | hypothetical protein | - |
| HV083_RS13440 () | 2788520..2788870 | - | 351 | WP_003832373.1 | phage head closure protein | - |
| HV083_RS13445 () | 2788882..2789199 | - | 318 | WP_003832371.1 | head-tail connector protein | - |
| HV083_RS13450 () | 2789180..2789551 | - | 372 | WP_181621055.1 | hypothetical protein | - |
| HV083_RS13455 () | 2789649..2790935 | - | 1287 | WP_181621057.1 | phage major capsid protein | - |
| HV083_RS13460 () | 2791009..2791929 | - | 921 | WP_181621066.1 | S49 family peptidase | - |
| HV083_RS13465 () | 2791966..2793222 | - | 1257 | WP_181621075.1 | phage portal protein | - |
| HV083_RS13470 () | 2793395..2795116 | - | 1722 | WP_048233529.1 | terminase large subunit | - |
| HV083_RS13475 () | 2795116..2795550 | - | 435 | WP_042309017.1 | phage terminase small subunit P27 family | - |
| HV083_RS13480 () | 2795887..2796249 | - | 363 | WP_181523299.1 | HNH endonuclease | - |
| HV083_RS13485 () | 2796516..2797208 | + | 693 | WP_181621077.1 | hypothetical protein | - |
| HV083_RS13490 () | 2797304..2797816 | - | 513 | WP_181621080.1 | DUF2514 domain-containing protein | - |
| HV083_RS13495 () | 2797795..2798343 | - | 549 | WP_181621082.1 | lysozyme | - |
| HV083_RS13500 () | 2798315..2798593 | - | 279 | WP_016150433.1 | hypothetical protein | - |
| HV083_RS13505 () | 2798986..2799585 | - | 600 | WP_181621085.1 | hypothetical protein | - |
| HV083_RS13510 () | 2799582..2799941 | - | 360 | WP_049016064.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV083_RS13515 () | 2799934..2800242 | - | 309 | WP_049016063.1 | DUF968 domain-containing protein | - |
| HV083_RS13520 () | 2800388..2800570 | - | 183 | WP_049016062.1 | hypothetical protein | - |
| HV083_RS13525 () | 2800692..2800928 | - | 237 | WP_049016061.1 | DinI-like family protein | - |
| HV083_RS13530 () | 2801426..2802517 | + | 1092 | WP_032650530.1 | hypothetical protein | - |
| HV083_RS13535 () | 2802528..2803775 | + | 1248 | WP_032650528.1 | hypothetical protein | - |
| HV083_RS13540 () | 2803772..2804419 | + | 648 | WP_050489294.1 | hypothetical protein | - |
| HV083_RS13550 () | 2805858..2806427 | + | 570 | WP_181621564.1 | IS91 family transposase ISMno24 | Transposase |
| HV083_RS13555 () | 2806600..2807523 | - | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| HV083_RS13560 () | 2807723..2808295 | - | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| HV083_RS13565 () | 2808839..2809036 | - | 198 | WP_049016056.1 | hypothetical protein | - |
| HV083_RS13570 () | 2809836..2810168 | - | 333 | WP_152686929.1 | hypothetical protein | - |
| HV083_RS13575 () | 2810180..2810389 | - | 210 | WP_049016052.1 | hypothetical protein | - |
| HV083_RS13580 () | 2810386..2811048 | - | 663 | WP_049016051.1 | DUF1627 domain-containing protein | - |
| HV083_RS13585 () | 2811062..2811517 | - | 456 | WP_080971892.1 | replication protein | - |
| HV083_RS13590 () | 2811501..2812595 | - | 1095 | WP_110248576.1 | hypothetical protein | - |
| HV083_RS13595 () | 2812592..2812834 | - | 243 | WP_049016049.1 | DUF4222 domain-containing protein | - |
| HV083_RS13600 () | 2812847..2813323 | - | 477 | WP_049016048.1 | hypothetical protein | - |
| HV083_RS13605 () | 2813323..2813562 | - | 240 | WP_049016047.1 | transcriptional regulator | - |
| HV083_RS13610 () | 2813645..2814052 | + | 408 | WP_047502014.1 | ISNCY family transposase ISH7A | Transposase |
| HV083_RS13615 () | 2814297..2814560 | - | 264 | WP_071891820.1 | hypothetical protein | - |
| HV083_RS13620 () | 2814928..2815122 | + | 195 | WP_049025790.1 | hypothetical protein | - |
| HV083_RS13625 () | 2815115..2815300 | + | 186 | WP_049016045.1 | hypothetical protein | - |
| HV083_RS13630 () | 2815634..2817481 | + | 1848 | WP_049016093.1 | hypothetical protein | - |
| HV083_RS13635 () | 2817478..2817711 | + | 234 | WP_137376489.1 | hypothetical protein | - |
| HV083_RS13640 () | 2817768..2818028 | + | 261 | WP_049016044.1 | hypothetical protein | - |
| HV083_RS13645 () | 2818006..2819085 | + | 1080 | WP_137376488.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2819215..2819356 | + | 142 | - | - | Antitoxin Detail |
| - () | 2819218..2819321 | - | 104 | - | - | Toxin Detail |
| HV083_RS13650 () | 2819477..2819815 | - | 339 | WP_003034934.1 | YebY family protein | - |
| HV083_RS13655 () | 2819836..2820708 | - | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| HV083_RS13660 () | 2820712..2821086 | - | 375 | WP_003841654.1 | CopC domain-containing protein YobA | - |
| HV083_RS13665 () | 2821709..2822299 | + | 591 | WP_032939142.1 | hypothetical protein | - |
| HV083_RS13670 () | 2822792..2822983 | + | 192 | WP_008322661.1 | hypothetical protein | - |
| HV083_RS13675 () | 2823263..2824383 | + | 1121 | WP_096147877.1 | IS3 family transposase ISSen4 | Transposase |
| HV083_RS13680 () | 2824526..2825428 | + | 903 | WP_003844140.1 | diguanylate cyclase | - |
| HV083_RS13685 () | 2825782..2826360 | + | 579 | WP_003844141.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HV083_RS13690 () | 2826667..2827392 | - | 726 | WP_003844142.1 | inovirus-type Gp2 protein | - |
| HV083_RS13695 () | 2827810..2828916 | - | 1107 | Protein_2684 | recombinase zinc beta ribbon domain-containing protein | - |
| HV083_RS13705 () | 2830139..2830786 | - | 648 | Protein_2686 | recombinase family protein | - |
| HV083_RS13710 () | 2830935..2831165 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV083_RS13715 () | 2831272..2831928 | + | 657 | WP_181621087.1 | carbon-nitrogen hydrolase family protein | - |
| HV083_RS13720 () | 2831952..2832614 | + | 663 | WP_048217917.1 | exodeoxyribonuclease X | - |
| HV083_RS13725 () | 2832605..2834659 | - | 2055 | WP_178317586.1 | oligopeptidase B | - |
| HV083_RS13730 () | 2834746..2835405 | - | 660 | WP_048217920.1 | tellurite resistance TerB family protein | - |
| HV083_RS13735 () | 2835500..2835853 | - | 354 | WP_003034909.1 | protein YebF | - |
| HV083_RS13740 () | 2835975..2836265 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV083_RS13745 () | 2836397..2837575 | + | 1179 | WP_181621089.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV083_RS13750 () | 2837643..2838284 | - | 642 | WP_048217922.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV083_RS13755 () | 2838319..2840130 | - | 1812 | WP_048217923.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|