MGE detailed information
MGE type: Genomic_island MGE length: 63847 bp
Accession: NZ_CP056834 Location: 4191105..4254951 Organism: Citrobacter sp. RHBSTW-00127 Replicon: chromosome
Accession: NZ_CP056834 Location: 4191105..4254951 Organism: Citrobacter sp. RHBSTW-00127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV084_RS20215 () | 4186298..4186618 | - | 321 | WP_094168986.1 | DUF134 domain-containing protein | - |
| HV084_RS20220 () | 4186818..4186975 | - | 158 | Protein_3962 | DUF2534 family protein | - |
| HV084_RS20225 () | 4187037..4189103 | - | 2067 | WP_094168985.1 | TonB-dependent copper receptor | - |
| HV084_RS20230 () | 4189175..4189561 | - | 387 | WP_094168992.1 | DUF2946 domain-containing protein | - |
| HV084_RS20235 () | 4189821..4190036 | + | 216 | WP_100245843.1 | hypothetical protein | - |
| HV084_RS20240 () | 4190019..4190630 | - | 612 | WP_094168984.1 | DUF2913 family protein | - |
| HV084_RS20245 () | 4191105..4193303 | - | 2199 | WP_094168983.1 | DEAD/DEAH box helicase | - |
| HV084_RS20250 () | 4193300..4194616 | - | 1317 | WP_094168981.1 | ATP-binding protein | - |
| HV084_RS20255 () | 4194620..4196929 | - | 2310 | WP_094168980.1 | TerB N-terminal domain-containing protein | - |
| HV084_RS20260 () | 4197398..4198311 | + | 914 | Protein_3970 | hypothetical protein | - |
| HV084_RS20265 () | 4198313..4199119 | + | 807 | WP_094168978.1 | GIY-YIG nuclease family protein | - |
| HV084_RS20270 () | 4199238..4199459 | + | 222 | Protein_3972 | transposase domain-containing protein | - |
| HV084_RS20275 () | 4199393..4199581 | - | 189 | WP_094168976.1 | hypothetical protein | - |
| HV084_RS20280 () | 4200272..4201645 | + | 1374 | WP_094168974.1 | hypothetical protein | - |
| HV084_RS20285 () | 4201828..4203156 | + | 1329 | WP_094168972.1 | nucleotidyltransferase | - |
| HV084_RS20290 () | 4203164..4203739 | + | 576 | WP_137378771.1 | SLATT domain-containing protein | - |
| HV084_RS20295 () | 4204129..4204380 | - | 252 | WP_141201940.1 | hypothetical protein | - |
| HV084_RS20300 () | 4204482..4204862 | - | 381 | WP_094169369.1 | hypothetical protein | - |
| HV084_RS20305 () | 4204853..4205191 | - | 339 | WP_047660995.1 | hypothetical protein | - |
| HV084_RS20310 () | 4205474..4205680 | - | 207 | WP_047660996.1 | AlpA family transcriptional regulator | - |
| HV084_RS20315 () | 4205783..4206358 | - | 576 | WP_094169370.1 | inovirus-type Gp2 protein | - |
| HV084_RS20320 () | 4207554..4208657 | + | 1104 | WP_094169371.1 | hypothetical protein | - |
| HV084_RS20325 () | 4208821..4209708 | + | 888 | WP_000682561.1 | 50S ribosome-binding GTPase | - |
| HV084_RS20330 () | 4209914..4210315 | + | 402 | WP_000819262.1 | hypothetical protein | - |
| HV084_RS20335 () | 4210412..4210879 | + | 468 | WP_000727137.1 | hypothetical protein | - |
| HV084_RS20340 () | 4211070..4211320 | + | 251 | Protein_3986 | DUF905 family protein | - |
| HV084_RS20345 () | 4211436..4212254 | + | 819 | WP_094169373.1 | DUF945 domain-containing protein | - |
| HV084_RS20350 () | 4212254..4212517 | + | 264 | WP_038633754.1 | hypothetical protein | - |
| HV084_RS20355 () | 4212595..4212990 | + | 396 | WP_176443286.1 | antirestriction protein | - |
| HV084_RS20360 () | 4213043..4213528 | + | 486 | WP_038642868.1 | DNA repair protein RadC | - |
| HV084_RS20365 () | 4213540..4213761 | + | 222 | WP_038633763.1 | DUF987 domain-containing protein | - |
| HV084_RS20370 () | 4213730..4214143 | + | 414 | WP_077249796.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV084_RS20375 () | 4214192..4214569 | + | 378 | WP_094169374.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV084_RS20380 () | 4214566..4215057 | + | 492 | WP_040063379.1 | hypothetical protein | - |
| HV084_RS20385 () | 4215087..4215281 | + | 195 | WP_038633777.1 | DUF957 domain-containing protein | - |
| HV084_RS20390 () | 4215362..4216210 | + | 849 | WP_040229927.1 | DUF4942 domain-containing protein | - |
| HV084_RS20395 () | 4216971..4217297 | + | 327 | Protein_3997 | PAAR domain-containing protein | - |
| HV084_RS20400 () | 4217599..4218762 | + | 1164 | WP_094169375.1 | S-type pyocin domain-containing protein | - |
| HV084_RS20405 () | 4218759..4219226 | + | 468 | WP_094169376.1 | pyocin immunity protein | - |
| HV084_RS20410 () | 4219388..4219630 | + | 243 | Protein_4000 | IS3 family transposase ISEhe3 | Transposase |
| HV084_RS20415 () | 4219861..4221201 | + | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HV084_RS20420 () | 4221233..4222384 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| HV084_RS20425 () | 4222449..4223048 | + | 600 | Protein_4003 | IS3 family transposase | - |
| HV084_RS20430 () | 4223329..4224411 | + | 1083 | WP_069219573.1 | IS110 family transposase ISEc21 | Transposase |
| HV084_RS20435 () | 4224428..4224724 | + | 297 | Protein_4005 | IS3 family transposase | - |
| HV084_RS20440 () | 4225671..4225934 | + | 264 | WP_072058784.1 | hypothetical protein | - |
| HV084_RS20445 () | 4226189..4227127 | + | 939 | WP_141201951.1 | hypothetical protein | - |
| HV084_RS20450 () | 4227366..4227748 | - | 383 | Protein_4008 | IS3 family transposase IS1351 | Transposase |
| HV084_RS20455 () | 4228123..4229304 | - | 1182 | WP_094169443.1 | hypothetical protein | - |
| HV084_RS20460 () | 4229465..4230481 | - | 1017 | WP_094169092.1 | IS5 family transposase IS5D | Transposase |
| HV084_RS20465 () | 4230486..4230914 | - | 429 | WP_181553822.1 | hypothetical protein | - |
| HV084_RS20470 () | 4230871..4231476 | - | 606 | WP_094169465.1 | C10 family peptidase | - |
| HV084_RS20475 () | 4232324..4232716 | - | 393 | WP_165500015.1 | hypothetical protein | - |
| HV084_RS20480 () | 4232890..4233366 | - | 477 | WP_053389974.1 | hypothetical protein | - |
| HV084_RS20485 () | 4233350..4234096 | - | 747 | WP_167593146.1 | winged helix-turn-helix domain-containing protein | - |
| HV084_RS20490 () | 4234210..4235559 | - | 1350 | WP_094169464.1 | hypothetical protein | - |
| HV084_RS20495 () | 4235552..4236976 | - | 1425 | WP_094169463.1 | L-fuculose phosphate aldolase | VF |
| HV084_RS20500 () | 4236973..4238061 | - | 1089 | WP_131351402.1 | glycosyltransferase family 2 protein | - |
| HV084_RS20505 () | 4238122..4239936 | - | 1815 | WP_181640789.1 | DUF4422 domain-containing protein | - |
| HV084_RS20510 () | 4239929..4240810 | - | 882 | WP_053389970.1 | L-fuculokinase | VF |
| HV084_RS20515 () | 4240807..4241967 | - | 1161 | WP_053389969.1 | L-fucose mutarotase | VF |
| HV084_RS20520 () | 4241964..4242722 | - | 759 | WP_047358694.1 | putative HTH-type transcriptional regulator YdjF | VF |
| HV084_RS20525 () | 4242722..4243504 | - | 783 | WP_047358693.1 | Ribosomal RNA large subunit methyltransferase M | VF |
| HV084_RS20530 () | 4243501..4244661 | - | 1161 | WP_094169461.1 | hypothetical protein | VF |
| HV084_RS20535 () | 4244658..4246364 | - | 1707 | WP_141201956.1 | O-antigen ligase C-terminal domain-containing protein | - |
| HV084_RS20540 () | 4246411..4246803 | - | 393 | WP_131351411.1 | hypothetical protein | - |
| HV084_RS20545 () | 4246882..4247388 | - | 507 | WP_052951276.1 | fimbrial protein | - |
| HV084_RS20550 () | 4247409..4248026 | - | 618 | WP_131351414.1 | fimbrial protein | - |
| HV084_RS20555 () | 4248023..4248529 | - | 507 | WP_081000499.1 | fimbrial protein | - |
| HV084_RS20560 () | 4248568..4249158 | - | 591 | WP_047358723.1 | type 1 fimbrial protein | - |
| HV084_RS20565 () | 4249217..4249957 | - | 741 | WP_149330333.1 | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | VF |
| HV084_RS20570 () | 4250036..4252537 | - | 2502 | WP_047358688.1 | Bifunctional adenosylcobalamin biosynthesis protein CobU | VF |
| HV084_RS20575 () | 4252537..4252938 | - | 402 | WP_081000479.1 | Cobyric acid synthase | VF |
| HV084_RS20580 () | 4253188..4253748 | - | 561 | WP_047358686.1 | Cobalt import ATP-binding protein CbiO | VF |
| HV084_RS20585 () | 4254433..4254951 | - | 519 | WP_131351417.1 | hypothetical protein | - |
| HV084_RS20590 () | 4256415..4257755 | - | 1341 | WP_053388786.1 | ImpA domain-containing protein | - |
| HV084_RS20595 () | 4257757..4258209 | - | 453 | WP_094169431.1 | type VI secretion system baseplate subunit TssE | - |
| HV084_RS20600 () | 4258209..4258754 | - | 546 | WP_053388784.1 | type VI secretion system lipoprotein TssJ | - |
| HV084_RS20605 () | 4258732..4259817 | - | 1086 | WP_053388783.1 | type VI secretion system baseplate subunit TssG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|