MGE detailed information
MGE type: Prophage MGE length: 94336 bp
Accession: NZ_CP056809 Location: 2071976..2166311 Organism: Citrobacter freundii strain RHBSTW-00162 Replicon: chromosome
Accession: NZ_CP056809 Location: 2071976..2166311 Organism: Citrobacter freundii strain RHBSTW-00162 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV103_RS09865 () | 2068111..2069922 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| HV103_RS09870 () | 2069957..2070598 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV103_RS09875 () | 2070666..2071844 | - | 1179 | WP_003034904.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV103_RS09880 () | 2071976..2072266 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV103_RS09885 () | 2072388..2072741 | + | 354 | WP_003034909.1 | protein YebF | - |
| HV103_RS09890 () | 2072836..2073495 | + | 660 | WP_046671222.1 | tellurite resistance TerB family protein | - |
| HV103_RS09895 () | 2073582..2075636 | + | 2055 | WP_175330410.1 | oligopeptidase B | - |
| HV103_RS09900 () | 2075627..2076289 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| HV103_RS09905 () | 2076313..2076969 | - | 657 | WP_046671220.1 | carbon-nitrogen hydrolase family protein | - |
| HV103_RS09910 () | 2077076..2077306 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV103_RS09915 () | 2077450..2077824 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| HV103_RS09920 () | 2077828..2078700 | + | 873 | WP_032935389.1 | copper homeostasis membrane protein CopD | - |
| HV103_RS09925 () | 2078721..2079059 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 2079180..2079323 | - | 144 | - | - | Antitoxin Detail |
| - () | 2079215..2079318 | + | 104 | - | - | Toxin Detail |
| HV103_RS09930 () | 2079396..2080481 | - | 1086 | WP_181635535.1 | hypothetical protein ; Integrase | Integrase |
| HV103_RS09935 () | 2080450..2080722 | - | 273 | WP_016156226.1 | hypothetical protein | - |
| HV103_RS09940 () | 2080787..2081029 | - | 243 | WP_003841647.1 | DUF4060 family protein | - |
| HV103_RS09945 () | 2081069..2082160 | - | 1092 | WP_181635536.1 | recombinase RecT | - |
| HV103_RS09950 () | 2082173..2085082 | - | 2910 | WP_181635537.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HV103_RS09955 () | 2085221..2085382 | - | 162 | WP_181635538.1 | hypothetical protein | - |
| HV103_RS09960 () | 2085394..2085600 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| HV103_RS09965 () | 2085935..2086297 | - | 363 | WP_181635586.1 | hypothetical protein | - |
| HV103_RS09970 () | 2086397..2086654 | + | 258 | WP_181635539.1 | helix-turn-helix domain-containing protein | - |
| HV103_RS09975 () | 2086657..2087196 | + | 540 | WP_181635540.1 | toxin YdaT domain-containing protein | - |
| HV103_RS09980 () | 2087281..2088192 | + | 912 | WP_181635541.1 | replication protein | - |
| HV103_RS09985 () | 2088195..2088944 | + | 750 | WP_181635542.1 | ATP-binding protein | - |
| HV103_RS09990 () | 2088963..2089274 | + | 312 | WP_181635543.1 | hypothetical protein | - |
| HV103_RS09995 () | 2089271..2089762 | + | 492 | WP_181635592.1 | hypothetical protein | - |
| HV103_RS10000 () | 2089765..2089974 | + | 210 | WP_181635544.1 | hypothetical protein | - |
| HV103_RS10005 () | 2089971..2090540 | + | 570 | WP_181635545.1 | ead/Ea22-like family protein | - |
| HV103_RS10010 () | 2090542..2091012 | + | 471 | WP_181635546.1 | class I SAM-dependent methyltransferase | - |
| HV103_RS10015 () | 2091169..2091585 | + | 417 | WP_137378507.1 | helix-turn-helix domain-containing protein | - |
| HV103_RS10020 () | 2092632..2092826 | + | 195 | WP_089502786.1 | hypothetical protein | - |
| HV103_RS10025 () | 2092882..2093481 | + | 600 | WP_181635547.1 | DUF1367 family protein | - |
| HV103_RS10030 () | 2093481..2093687 | + | 207 | WP_181635548.1 | hypothetical protein | - |
| HV103_RS10035 () | 2093690..2094295 | + | 606 | WP_181635549.1 | recombination protein NinG | - |
| HV103_RS10040 () | 2094507..2095196 | + | 690 | WP_181635550.1 | antiterminator | - |
| HV103_RS10045 () | 2095377..2095946 | + | 570 | WP_181635551.1 | hypothetical protein | - |
| HV103_RS10050 () | 2096284..2096682 | + | 399 | WP_049041756.1 | membrane protein | - |
| HV103_RS10055 () | 2096679..2096954 | + | 276 | WP_128611492.1 | phage holin family protein | - |
| HV103_RS10060 () | 2096954..2097496 | + | 543 | WP_181635587.1 | glycoside hydrolase family 108 protein | - |
| HV103_RS10065 () | 2097493..2097765 | + | 273 | WP_181635552.1 | hypothetical protein | - |
| HV103_RS10070 () | 2098062..2098403 | - | 342 | WP_181635553.1 | hypothetical protein | - |
| HV103_RS10075 () | 2098704..2099312 | + | 609 | WP_181635554.1 | terminase small subunit | - |
| HV103_RS10080 () | 2099296..2099619 | + | 324 | Protein_1969 | PBSX family phage terminase large subunit | - |
| HV103_RS10085 () | 2099624..2100112 | - | 489 | Protein_1970 | IS3 family transposase ISLad1 | Transposase |
| HV103_RS10090 () | 2100193..2101701 | - | 1509 | WP_001189109.1 | group II intron reverse transcriptase/maturase | - |
| HV103_RS10095 () | 2102374..2103062 | - | 689 | Protein_1972 | IS3 family transposase | - |
| HV103_RS10100 () | 2103136..2104110 | + | 975 | Protein_1973 | PBSX family phage terminase large subunit | - |
| HV103_RS10105 () | 2104305..2105672 | + | 1368 | WP_181635555.1 | DUF1073 domain-containing protein | - |
| HV103_RS10110 () | 2105677..2106291 | + | 615 | WP_181635556.1 | hypothetical protein | - |
| HV103_RS10115 () | 2106291..2107481 | + | 1191 | WP_181635557.1 | DUF2213 domain-containing protein | - |
| HV103_RS10120 () | 2107492..2108013 | + | 522 | WP_181635558.1 | hypothetical protein | - |
| HV103_RS10125 () | 2108030..2109169 | + | 1140 | WP_181635559.1 | DUF2184 domain-containing protein | - |
| HV103_RS10130 () | 2109210..2109575 | + | 366 | WP_181635560.1 | hypothetical protein | - |
| HV103_RS10135 () | 2109579..2110010 | + | 432 | WP_181635561.1 | DUF4054 domain-containing protein | - |
| HV103_RS10140 () | 2110010..2110462 | + | 453 | WP_181635562.1 | hypothetical protein | - |
| HV103_RS10145 () | 2110459..2110830 | + | 372 | WP_181635563.1 | hypothetical protein | - |
| HV103_RS10150 () | 2110827..2111360 | + | 534 | WP_181635564.1 | hypothetical protein | - |
| HV103_RS10155 () | 2111373..2112899 | + | 1527 | WP_181635565.1 | DUF3383 domain-containing protein | - |
| HV103_RS10160 () | 2112948..2113397 | + | 450 | WP_181635566.1 | hypothetical protein | - |
| HV103_RS10165 () | 2113399..2113851 | + | 453 | WP_181635567.1 | hypothetical protein | - |
| HV103_RS10170 () | 2114242..2114733 | - | 492 | WP_053390004.1 | DUF4236 domain-containing protein | - |
| HV103_RS10175 () | 2114817..2116547 | + | 1731 | WP_181635568.1 | hypothetical protein | - |
| HV103_RS10180 () | 2116547..2117176 | + | 630 | WP_181635569.1 | hypothetical protein | - |
| HV103_RS10185 () | 2117176..2117478 | + | 303 | WP_181635570.1 | hypothetical protein | - |
| HV103_RS10190 () | 2117456..2118370 | + | 915 | WP_181635571.1 | hypothetical protein | - |
| HV103_RS10195 () | 2118330..2118980 | + | 651 | WP_181635572.1 | hypothetical protein | - |
| HV103_RS10200 () | 2118977..2119327 | + | 351 | WP_181635573.1 | hypothetical protein | - |
| HV103_RS10205 () | 2119314..2120522 | + | 1209 | WP_181635574.1 | hypothetical protein | - |
| HV103_RS10210 () | 2120519..2121172 | + | 654 | WP_181635575.1 | DUF2612 domain-containing protein | - |
| HV103_RS10215 () | 2121552..2121725 | + | 174 | Protein_1996 | phage tail protein | - |
| HV103_RS10220 () | 2122338..2122490 | + | 153 | Protein_1997 | phage tail protein | - |
| HV103_RS10225 () | 2122715..2123140 | + | 426 | WP_181635576.1 | tail fiber assembly protein | - |
| HV103_RS10230 () | 2123554..2123934 | + | 381 | WP_181635577.1 | LexA family transcriptional regulator | - |
| HV103_RS10235 () | 2123935..2124603 | - | 669 | WP_181635578.1 | SOS response-associated peptidase | - |
| HV103_RS10240 () | 2125087..2125728 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| HV103_RS10245 () | 2125729..2125920 | - | 192 | WP_003841978.1 | YebW family protein | - |
| HV103_RS10250 () | 2126023..2126259 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV103_RS10255 () | 2126360..2127781 | - | 1422 | WP_071977990.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV103_RS10260 () | 2127861..2130494 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| HV103_RS10265 () | 2130463..2131746 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| HV103_RS10270 () | 2131875..2132372 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| HV103_RS10275 () | 2132469..2133155 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| HV103_RS10280 () | 2133175..2135223 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| HV103_RS10285 () | 2135416..2136297 | + | 882 | WP_003034964.1 | protease HtpX | - |
| HV103_RS10290 () | 2136396..2137433 | - | 1038 | WP_046671161.1 | hypothetical protein | - |
| HV103_RS10295 () | 2137643..2138176 | + | 534 | WP_052946592.1 | hypothetical protein | VF |
| HV103_RS10300 () | 2138157..2139935 | + | 1779 | WP_046671160.1 | type III secretion system translocon subunit SctE | - |
| HV103_RS10305 () | 2139961..2140752 | + | 792 | WP_046671158.1 | hypothetical protein | - |
| HV103_RS10310 () | 2140828..2141487 | - | 660 | WP_046671156.1 | type III secretion protein HrpE | - |
| HV103_RS10315 () | 2141480..2142016 | - | 537 | WP_003844117.1 | hypothetical protein | - |
| HV103_RS10320 () | 2142076..2142807 | - | 732 | WP_052946591.1 | hypothetical protein | VF |
| HV103_RS10325 () | 2142804..2143121 | - | 318 | WP_052739223.1 | hypothetical protein | VF |
| HV103_RS10330 () | 2143195..2143482 | - | 288 | WP_003844113.1 | hypothetical protein | VF |
| HV103_RS10335 () | 2143509..2144786 | - | 1278 | WP_080953254.1 | type III secretion apparatus | - |
| HV103_RS10340 () | 2145018..2145386 | + | 369 | WP_003844110.1 | hypothetical protein | - |
| HV103_RS10345 () | 2145402..2146184 | + | 783 | WP_046671153.1 | helix-turn-helix domain-containing protein | - |
| HV103_RS10350 () | 2146388..2148136 | + | 1749 | WP_052946590.1 | hypothetical protein | VF |
| HV103_RS10355 () | 2148140..2149267 | + | 1128 | WP_146145557.1 | hypothetical protein | VF |
| HV103_RS10360 () | 2149586..2151616 | + | 2031 | WP_046671151.1 | hypothetical protein | VF |
| HV103_RS10365 () | 2151621..2152025 | + | 405 | WP_046671149.1 | hypothetical protein | VF |
| HV103_RS10370 () | 2152025..2153326 | + | 1302 | WP_046671147.1 | ATP synthase subunit beta | VF |
| HV103_RS10375 () | 2153316..2153765 | + | 450 | WP_046671145.1 | hypothetical protein | - |
| HV103_RS10380 () | 2153753..2154676 | + | 924 | WP_046671144.1 | hypothetical protein | - |
| HV103_RS10385 () | 2154673..2155593 | + | 921 | WP_046671143.1 | FliM/FliN family flagellar motor switch protein | - |
| HV103_RS10390 () | 2155603..2156292 | + | 690 | WP_046671141.1 | hypothetical protein | VF |
| HV103_RS10395 () | 2156296..2156556 | + | 261 | WP_003844086.1 | hypothetical protein | VF |
| HV103_RS10400 () | 2156567..2157328 | + | 762 | WP_052739225.1 | hypothetical protein | VF |
| HV103_RS10405 () | 2157334..2158470 | + | 1137 | WP_046671140.1 | hypothetical protein | VF |
| HV103_RS10410 () | 2158460..2159110 | + | 651 | WP_046671139.1 | lytic transglycosylase domain-containing protein | - |
| HV103_RS10415 () | 2159249..2159929 | + | 681 | WP_046671137.1 | Transcriptional regulatory protein RcsB | VF |
| HV103_RS10420 () | 2159960..2161675 | + | 1716 | WP_080941990.1 | hypothetical protein | VF |
| HV103_RS10425 () | 2161685..2161891 | + | 207 | WP_003844076.1 | hypothetical protein | - |
| HV103_RS10430 () | 2161955..2163322 | - | 1368 | WP_181635579.1 | MFS transporter | - |
| HV103_RS10435 () | 2163497..2164288 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| HV103_RS10440 () | 2164403..2164642 | - | 240 | WP_003034975.1 | membrane protein | - |
| HV103_RS10445 () | 2164807..2164950 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| HV103_RS10450 () | 2165025..2165309 | + | 285 | WP_003034980.1 | YebO family protein | - |
| HV103_RS10455 () | 2165946..2166089 | + | 144 | WP_003034983.1 | YobF family protein | - |
| HV103_RS10460 () | 2166102..2166311 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV103_RS10465 () | 2166531..2168276 | + | 1746 | WP_003021017.1 | peptidoglycan glycosyltransferase FtsI | - |
| HV103_RS10470 () | 2168340..2169149 | + | 810 | WP_181635580.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV103_RS10475 () | 2169146..2169712 | - | 567 | WP_046671131.1 | manganese efflux pump MntP | - |
| HV103_RS10480 () | 2170145..2170603 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|