MGE detailed information
MGE type: Conjugative plasmid MGE length: 140774 bp
Accession: NZ_CP056708 Location: 1..140774 Organism: Enterobacter hormaechei strain RHBSTW-00564 Replicon: plasmid pRHBSTW-00564_2
Accession: NZ_CP056708 Location: 1..140774 Organism: Enterobacter hormaechei strain RHBSTW-00564 Replicon: plasmid pRHBSTW-00564_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV236_RS22585 () | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| HV236_RS22590 () | 1709..2449 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| HV236_RS22595 () | 2813..3781 | - | 969 | WP_023307223.1 | IS5-like element IS903B family transposase | - |
| HV236_RS22600 () | 4026..4229 | + | 204 | WP_004213596.1 | hemolysin expression modulator Hha | - |
| HV236_RS22605 () | 4243..4473 | + | 231 | WP_023307222.1 | hypothetical protein | - |
| HV236_RS22610 () | 4918..5184 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV236_RS22615 () | 5172..5654 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV236_RS22620 () | 5866..7209 | + | 1344 | WP_080339306.1 | ISNCY family transposase | - |
| HV236_RS22625 () | 7280..8098 | - | 819 | WP_023307220.1 | abortive infection family protein | - |
| HV236_RS22630 () | 8107..8685 | - | 579 | WP_181522286.1 | recombinase family protein | - |
| HV236_RS22635 () | 9118..10238 | + | 1121 | WP_096147877.1 | IS3-like element ISSen4 family transposase | - |
| HV236_RS22640 () | 10231..10617 | - | 387 | WP_023307218.1 | hypothetical protein | - |
| HV236_RS22645 () | 10764..11204 | + | 441 | WP_023307217.1 | IS66 family insertion sequence hypothetical protein | - |
| HV236_RS22650 () | 11201..11551 | + | 351 | WP_004189161.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HV236_RS22655 () | 11582..13174 | + | 1593 | WP_023307215.1 | IS66-like element ISKox1 family transposase | - |
| HV236_RS22660 () | 13394..14362 | - | 969 | WP_023304022.1 | IS5 family transposase | - |
| HV236_RS22665 () | 14522..14785 | + | 264 | WP_032667972.1 | hypothetical protein | - |
| HV236_RS22670 () | 15008..15289 | + | 282 | WP_013307885.1 | helix-turn-helix domain-containing protein | - |
| HV236_RS22675 () | 15324..15893 | + | 570 | WP_004118809.1 | small heat shock protein sHSP20 | - |
| HV236_RS22680 () | 15999..18848 | + | 2850 | WP_023304020.1 | heat shock survival AAA family ATPase ClpK | - |
| HV236_RS22685 () | 18848..19039 | + | 192 | WP_017146640.1 | hypothetical protein | - |
| HV236_RS22690 () | 19100..19836 | + | 737 | Protein_21 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| HV236_RS22695 () | 19787..19927 | + | 141 | WP_023205099.1 | ATP-dependent metalloprotease FtsH | - |
| HV236_RS22700 () | 20015..20473 | + | 459 | WP_001275372.1 | small heat shock protein sHSP20-GI | - |
| HV236_RS22705 () | 20496..21410 | + | 915 | WP_016154559.1 | heat resistance protein YfdX1 | - |
| HV236_RS22710 () | 21513..22400 | + | 888 | WP_019077722.1 | heat resistance protein YfdX2 | - |
| HV236_RS22715 () | 22490..23101 | + | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| HV236_RS22720 () | 23181..24326 | + | 1146 | WP_023304019.1 | hypothetical protein | - |
| HV236_RS22725 () | 24316..24756 | + | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| HV236_RS22730 () | 24760..26475 | + | 1716 | WP_023304018.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| HV236_RS22735 () | 26472..26969 | + | 498 | WP_001514138.1 | heat resistance protein PsiE-GI | - |
| HV236_RS22740 () | 26947..27912 | + | 966 | WP_023304017.1 | M48 family metalloprotease | - |
| HV236_RS22745 () | 27937..29088 | + | 1152 | WP_023304016.1 | trypsin-like peptidase domain-containing protein | - |
| HV236_RS22750 () | 29313..29702 | - | 390 | Protein_33 | transposase | - |
| HV236_RS22755 () | 29933..30514 | + | 582 | Protein_34 | transposase | - |
| HV236_RS22760 () | 30529..31226 | - | 698 | Protein_35 | IS1 family transposase | - |
| HV236_RS22765 () | 31655..33652 | + | 1998 | WP_023304012.1 | choline BCCT transporter BetT | - |
| HV236_RS22770 () | 33716..35008 | + | 1293 | WP_023304011.1 | DUF2254 domain-containing protein | - |
| HV236_RS22775 () | 35049..36029 | + | 981 | WP_000019450.1 | IS5-like element ISKpn26 family transposase | - |
| HV236_RS22780 () | 36179..43363 | + | 7185 | Protein_39 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HV236_RS22785 () | 43516..43986 | - | 471 | WP_164972931.1 | EAL domain-containing protein | - |
| HV236_RS22790 () | 44040..45020 | + | 981 | WP_022652281.1 | IS5-like element ISKpn26 family transposase | - |
| HV236_RS22795 () | 45343..46347 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| HV236_RS22800 () | 46447..46760 | - | 314 | Protein_43 | Tn3 family transposase | - |
| HV236_RS22805 () | 46787..47539 | - | 753 | WP_023307212.1 | alpha/beta hydrolase | - |
| HV236_RS22810 () | 47781..48035 | + | 255 | Protein_45 | EamA family transporter | - |
| HV236_RS22815 () | 48143..48916 | - | 774 | WP_023307210.1 | SDR family oxidoreductase | - |
| HV236_RS22820 () | 48982..49377 | - | 396 | Protein_47 | DsbA family protein | - |
| HV236_RS22830 () | 50600..50908 | - | 309 | Protein_49 | DsbA family protein | - |
| HV236_RS22835 () | 50974..52080 | - | 1107 | WP_006687059.1 | alkene reductase | - |
| HV236_RS22840 () | 52293..52622 | + | 330 | WP_023304047.1 | thioredoxin family protein | - |
| HV236_RS22845 () | 52652..52990 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| HV236_RS22850 () | 52995..53576 | - | 582 | WP_023304048.1 | TetR/AcrR family transcriptional regulator | - |
| HV236_RS22855 () | 53718..54275 | - | 558 | WP_023304049.1 | OsmC family protein | - |
| HV236_RS22860 () | 54519..56546 | + | 2028 | WP_009653620.1 | type I restriction-modification system subunit M | - |
| HV236_RS22865 () | 56543..57877 | + | 1335 | WP_009653617.1 | restriction endonuclease subunit S | - |
| HV236_RS22870 () | 57878..61135 | + | 3258 | WP_009653619.1 | type I restriction endonuclease subunit R | - |
| HV236_RS22875 () | 61140..62408 | + | 1269 | WP_009653618.1 | ISL3 family transposase | - |
| HV236_RS22880 () | 62441..62626 | + | 186 | WP_125375351.1 | hypothetical protein | - |
| HV236_RS22885 () | 62640..63224 | - | 585 | WP_008502231.1 | recombinase family protein | - |
| HV236_RS22890 () | 63384..64891 | + | 1508 | Protein_61 | DUF4158 domain-containing protein | - |
| HV236_RS22895 () | 64925..67822 | - | 2898 | WP_181522287.1 | Tn3-like element Tn5403 family transposase | - |
| HV236_RS22900 () | 67917..68522 | + | 606 | WP_000509966.1 | recombinase family protein | - |
| HV236_RS22905 () | 69182..70363 | + | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| HV236_RS22910 () | 70790..71104 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| HV236_RS22915 () | 71359..71715 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| HV236_RS22920 () | 71705..72106 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| HV236_RS22925 () | 72103..72393 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| HV236_RS22930 () | 72468..75434 | + | 2967 | WP_003100881.1 | Tn3-like element ISPa38 family transposase | - |
| HV236_RS22935 () | 75513..76535 | + | 1023 | WP_181522282.1 | IS110-like element IS4321 family transposase | - |
| HV236_RS22940 () | 76581..77561 | + | 981 | WP_000019450.1 | IS5-like element ISKpn26 family transposase | - |
| HV236_RS22945 () | 77662..77907 | - | 246 | WP_181522283.1 | hypothetical protein | - |
| HV236_RS22950 () | 78905..79780 | - | 876 | WP_085952537.1 | incFII family plasmid replication initiator RepA | - |
| HV236_RS22955 () | 79761..79838 | - | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| HV236_RS22960 () | 80057..80335 | - | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| HV236_RS22965 () | 80487..81032 | - | 546 | WP_008324931.1 | phospholipase D family protein | - |
| HV236_RS22970 () | 81180..81971 | - | 792 | WP_008324924.1 | DsbA family protein | - |
| HV236_RS22975 () | 81964..82683 | - | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| HV236_RS22980 () | 82750..83487 | - | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV236_RS22985 () | 83489..88729 | - | 5241 | WP_023307204.1 | conjugative transfer relaxase/helicase TraI | - |
| HV236_RS22990 () | 88729..90930 | - | 2202 | WP_023307203.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV236_RS23000 () | 92322..92963 | - | 642 | WP_181522284.1 | sel1 repeat family protein | - |
| HV236_RS23005 () | 93038..93469 | - | 432 | WP_008324118.1 | entry exclusion protein | - |
| HV236_RS23010 () | 93491..96313 | - | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV236_RS23015 () | 96313..97683 | - | 1371 | WP_008324121.1 | conjugal transfer protein TraH | - |
| HV236_RS23020 () | 97670..98098 | - | 429 | WP_008324122.1 | hypothetical protein | - |
| HV236_RS23025 () | 98091..98645 | - | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HV236_RS23030 () | 98635..98883 | - | 249 | WP_008324126.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV236_RS23035 () | 98900..99649 | - | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV236_RS23040 () | 99680..99868 | - | 189 | WP_008324128.1 | hypothetical protein | - |
| HV236_RS23045 () | 99900..101753 | - | 1854 | WP_022652255.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HV236_RS23050 () | 101750..102379 | - | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV236_RS23055 () | 102396..103382 | - | 987 | WP_032160671.1 | conjugal transfer pilus assembly protein TraU | - |
| HV236_RS23060 () | 103385..104032 | - | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| HV236_RS23065 () | 104032..104379 | - | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| HV236_RS23070 () | 104376..107006 | - | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| HV236_RS23075 () | 106999..107565 | - | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| HV236_RS23080 () | 107555..107956 | - | 402 | WP_008324137.1 | hypothetical protein | - |
| HV236_RS23085 () | 107940..108125 | - | 186 | WP_008324139.1 | hypothetical protein | - |
| HV236_RS23090 () | 108129..108353 | - | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| HV236_RS23095 () | 108473..109012 | - | 540 | WP_181522285.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HV236_RS23100 () | 109034..110428 | - | 1395 | WP_008324156.1 | conjugal transfer protein TraB | - |
| HV236_RS23105 () | 110415..111158 | - | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| HV236_RS23110 () | 111145..111711 | - | 567 | WP_008324158.1 | type IV conjugative transfer system protein TraE | - |
| HV236_RS23115 () | 111726..112031 | - | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| HV236_RS23120 () | 112182..112532 | - | 351 | WP_008324162.1 | type IV conjugative transfer system pilin TraA | - |
| HV236_RS23125 () | 112590..112814 | - | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| HV236_RS23130 () | 112901..113590 | - | 690 | WP_008324166.1 | hypothetical protein | - |
| HV236_RS23135 () | 113779..114171 | - | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| HV236_RS23140 () | 114603..115079 | + | 477 | WP_008324168.1 | transglycosylase SLT domain-containing protein | - |
| HV236_RS23145 () | 115126..115656 | - | 531 | WP_008324170.1 | antirestriction protein | - |
| HV236_RS23150 () | 116283..117113 | - | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| HV236_RS23155 () | 117156..117419 | - | 264 | WP_008324174.1 | hypothetical protein | - |
| HV236_RS23160 () | 117505..117849 | - | 345 | WP_008324177.1 | hypothetical protein | - |
| HV236_RS23165 () | 117896..118183 | - | 288 | WP_008324178.1 | hypothetical protein | - |
| HV236_RS23170 () | 118237..118611 | - | 375 | WP_008324180.1 | hypothetical protein | - |
| HV236_RS23175 () | 119238..119597 | - | 360 | WP_008324181.1 | hypothetical protein | - |
| HV236_RS23180 () | 119659..119982 | - | 324 | WP_008324183.1 | hypothetical protein | - |
| HV236_RS23185 () | 119979..120707 | - | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| HV236_RS23190 () | 120704..121135 | - | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| HV236_RS23195 () | 121178..123187 | - | 2010 | WP_008324188.1 | ParB/RepB/Spo0J family partition protein | - |
| HV236_RS23200 () | 123258..123488 | - | 231 | WP_008324190.1 | DUF905 domain-containing protein | - |
| HV236_RS23205 () | 123773..124075 | + | 303 | WP_032072909.1 | hypothetical protein | - |
| HV236_RS23210 () | 124114..124430 | - | 317 | Protein_125 | hypothetical protein | - |
| HV236_RS23215 () | 124465..124719 | - | 255 | WP_008324193.1 | DNA polymerase III subunit theta | - |
| HV236_RS23220 () | 124912..125103 | - | 192 | WP_008324194.1 | hypothetical protein | - |
| HV236_RS23225 () | 125146..125652 | - | 507 | WP_008324195.1 | antirestriction protein ArdA | - |
| HV236_RS23230 () | 126051..126830 | - | 780 | WP_008324198.1 | hypothetical protein | - |
| HV236_RS23235 () | 126884..127303 | - | 420 | WP_008324200.1 | DUF1380 domain-containing protein | - |
| HV236_RS23240 () | 127287..127535 | - | 249 | WP_008324202.1 | hypothetical protein | - |
| HV236_RS23245 () | 127535..128212 | - | 678 | WP_008324204.1 | DNA methylase | - |
| HV236_RS23250 () | 128572..129243 | + | 672 | WP_008324206.1 | SOS response-associated peptidase family protein | - |
| HV236_RS23255 () | 129423..129845 | + | 423 | WP_008324207.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV236_RS23260 () | 129845..129973 | + | 129 | Protein_135 | DNA polymerase V subunit UmuC | - |
| HV236_RS23265 () | 130018..131577 | - | 1560 | Protein_136 | Mov34/MPN/PAD-1 family protein | - |
| HV236_RS23270 () | 131625..132322 | + | 698 | Protein_137 | IS1 family transposase | - |
| HV236_RS23275 () | 132338..133849 | - | 1512 | Protein_138 | site-specific integrase | - |
| HV236_RS23280 () | 133833..134840 | - | 1008 | WP_008325196.1 | site-specific integrase | - |
| HV236_RS23285 () | 134902..136044 | + | 1143 | Protein_140 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HV236_RS23290 () | 136123..136374 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| HV236_RS23295 () | 136428..136733 | + | 306 | WP_008325193.1 | hypothetical protein | - |
| HV236_RS23300 () | 137887..138858 | - | 972 | WP_004206785.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV236_RS23305 () | 138858..140024 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|