MGE detailed information
MGE type: Prophage MGE length: 58978 bp
Accession: NZ_CP056697 Location: 1879117..1938094 Organism: Escherichia marmotae strain RHBSTW-00605 Replicon: chromosome
Accession: NZ_CP056697 Location: 1879117..1938094 Organism: Escherichia marmotae strain RHBSTW-00605 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV246_RS08685 () | 1874605..1875276 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| HV246_RS08690 () | 1875436..1876806 | - | 1371 | WP_000423722.1 | adenylosuccinate lyase | - |
| HV246_RS08695 () | 1876810..1877451 | - | 642 | WP_001516208.1 | high frequency lysogenization protein HflD | - |
| HV246_RS08700 () | 1877486..1878592 | - | 1107 | WP_181479171.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| HV246_RS08705 () | 1878646..1879107 | - | 462 | WP_000476079.1 | phosphatase NudJ | - |
| HV246_RS08710 () | 1879117..1879770 | - | 654 | WP_001516210.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| HV246_RS08715 () | 1879942..1881192 | + | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| HV246_RS08720 () | 1881456..1881866 | - | 411 | WP_001516236.1 | ASCH domain-containing protein | - |
| HV246_RS08725 () | 1882049..1882144 | - | 96 | WP_010380789.1 | DUF1317 family protein | - |
| HV246_RS08730 () | 1882141..1882236 | - | 96 | WP_010380786.1 | hypothetical protein | - |
| HV246_RS08735 () | 1882254..1882403 | - | 150 | WP_000035101.1 | hypothetical protein | - |
| HV246_RS08740 () | 1882599..1882931 | + | 333 | WP_001070432.1 | SMR family multidrug efflux protein EmrE | - |
| HV246_RS08745 () | 1882992..1884035 | - | 1044 | WP_181479172.1 | alpha/beta hydrolase | - |
| HV246_RS08750 () | 1884397..1884948 | + | 552 | WP_105267735.1 | kinase inhibitor | - |
| HV246_RS08755 () | 1884958..1885752 | + | 795 | Protein_1703 | helix-turn-helix transcriptional regulator | - |
| HV246_RS08760 () | 1885954..1886292 | + | 339 | Protein_1704 | antitermination protein | - |
| HV246_RS08765 () | 1886665..1886880 | + | 216 | WP_000066486.1 | cold shock-like protein CspB | - |
| HV246_RS08770 () | 1888025..1888393 | + | 369 | Protein_1706 | terminase small subunit | - |
| HV246_RS08775 () | 1888579..1889688 | + | 1110 | WP_016261941.1 | alkene reductase | - |
| HV246_RS08780 () | 1889689..1890600 | - | 912 | WP_016248625.1 | LysR family transcriptional regulator | - |
| HV246_RS08785 () | 1890829..1891155 | + | 327 | WP_000092982.1 | EthD family reductase | - |
| HV246_RS08790 () | 1891268..1891984 | - | 717 | WP_000532916.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HV246_RS08795 () | 1892259..1892588 | - | 330 | WP_010376212.1 | YkgJ family cysteine cluster protein | - |
| HV246_RS08800 () | 1893399..1894922 | + | 1524 | WP_181479173.1 | cyclic diguanylate phosphodiesterase | - |
| HV246_RS08805 () | 1895093..1895311 | + | 219 | WP_001065870.1 | hypothetical protein | - |
| HV246_RS08810 () | 1895619..1895954 | - | 336 | WP_000979974.1 | YmgD family protein | - |
| HV246_RS08815 () | 1895958..1896242 | - | 285 | WP_001516250.1 | glycine zipper family protein | - |
| HV246_RS08820 () | 1896753..1897019 | - | 267 | WP_001185664.1 | cell division topological specificity factor MinE | - |
| HV246_RS08825 () | 1897023..1897835 | - | 813 | WP_000101053.1 | septum site-determining protein MinD | - |
| HV246_RS08830 () | 1897859..1898554 | - | 696 | WP_038355935.1 | septum site-determining protein MinC | - |
| HV246_RS08835 () | 1898683..1898976 | + | 294 | WP_001516252.1 | YcgL domain-containing protein | - |
| HV246_RS08840 () | 1899048..1899707 | + | 660 | WP_000284291.1 | fumarylacetoacetate hydrolase family protein | - |
| HV246_RS08845 () | 1899784..1900245 | + | 462 | WP_000807616.1 | YcgN family cysteine cluster protein | - |
| HV246_RS08850 () | 1901083..1901868 | - | 786 | WP_181479174.1 | zinc ABC transporter permease subunit ZnuB | - |
| HV246_RS08855 () | 1901865..1902620 | - | 756 | WP_001516255.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| HV246_RS08860 () | 1902699..1903631 | + | 933 | WP_010376204.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV246_RS08865 () | 1903647..1904969 | + | 1323 | WP_001184055.1 | murein DD-endopeptidase MepM | - |
| HV246_RS08870 () | 1905088..1906059 | + | 972 | WP_181479175.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| HV246_RS08875 () | 1906214..1907656 | - | 1443 | WP_000091161.1 | pyruvate kinase | - |
| HV246_RS08880 () | 1907783..1908652 | - | 870 | WP_001056699.1 | DNA-binding transcriptional regulator HexR | - |
| HV246_RS08885 () | 1908675..1908974 | + | 300 | WP_000155615.1 | hypothetical protein | - |
| HV246_RS08890 () | 1908990..1910465 | + | 1476 | WP_000301721.1 | glucose-6-phosphate dehydrogenase | - |
| HV246_RS08895 () | 1910700..1912511 | + | 1812 | WP_001516259.1 | phosphogluconate dehydratase | - |
| HV246_RS08900 () | 1912549..1913190 | + | 642 | WP_000800529.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV246_RS08905 () | 1913246..1914424 | - | 1179 | WP_001516260.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV246_RS08910 () | 1914566..1914856 | + | 291 | WP_000257577.1 | DNA damage-inducible protein YebG | - |
| HV246_RS08915 () | 1914923..1915279 | + | 357 | WP_181479176.1 | protein YebF | - |
| HV246_RS08920 () | 1915586..1916245 | + | 660 | WP_000024720.1 | tellurite resistance TerB family protein | - |
| HV246_RS08925 () | 1916454..1918514 | + | 2061 | WP_016248631.1 | oligopeptidase B | - |
| HV246_RS08930 () | 1918511..1919173 | - | 663 | WP_000944296.1 | exodeoxyribonuclease X | - |
| HV246_RS08935 () | 1919198..1919854 | - | 657 | WP_000122137.1 | carbon-nitrogen hydrolase family protein | - |
| HV246_RS08940 () | 1919955..1920185 | - | 231 | WP_000916764.1 | DNA polymerase III subunit theta | - |
| HV246_RS08945 () | 1920324..1920698 | + | 375 | WP_000168753.1 | CopC domain-containing protein YobA | - |
| HV246_RS08950 () | 1920702..1921574 | + | 873 | WP_181479177.1 | copper homeostasis membrane protein CopD | - |
| HV246_RS08955 () | 1921587..1921928 | + | 342 | WP_000976465.1 | YebY family protein | - |
| - () | 1921958..1922203 | - | 246 | - | - | Antitoxin Detail |
| - () | 1922086..1922189 | + | 104 | - | - | Toxin Detail |
| HV246_RS08960 () | 1922338..1922994 | + | 657 | WP_000806226.1 | protein-serine/threonine phosphatase | - |
| HV246_RS08965 () | 1922995..1923186 | - | 192 | WP_001516263.1 | YebW family protein | - |
| HV246_RS08970 () | 1923291..1923527 | - | 237 | WP_001516264.1 | DUF1480 family protein | - |
| HV246_RS08975 () | 1923643..1925082 | - | 1440 | WP_181479178.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV246_RS08980 () | 1925162..1927795 | - | 2634 | WP_181479179.1 | lipid-binding membrane homeostasis protein YebT | - |
| HV246_RS08985 () | 1927764..1929047 | - | 1284 | WP_001516266.1 | membrane integrity lipid transport subunit YebS | - |
| HV246_RS08990 () | 1929177..1929674 | + | 498 | WP_001043873.1 | L-methionine (R)-S-oxide reductase | - |
| HV246_RS08995 () | 1929771..1930469 | + | 699 | WP_000431382.1 | RNA chaperone ProQ | - |
| HV246_RS09000 () | 1930489..1932537 | + | 2049 | WP_181479180.1 | carboxy terminal-processing peptidase | - |
| HV246_RS09005 () | 1932743..1933624 | + | 882 | WP_000984500.1 | protease HtpX | - |
| HV246_RS09010 () | 1933671..1935044 | - | 1374 | WP_010376166.1 | MFS transporter | - |
| HV246_RS09015 () | 1935221..1936012 | + | 792 | WP_001262177.1 | DNA-binding transcriptional regulator KdgR | - |
| HV246_RS09020 () | 1936167..1936406 | - | 240 | WP_001211005.1 | membrane protein | - |
| HV246_RS09025 () | 1936564..1936707 | + | 144 | WP_000714549.1 | PhoP/PhoQ regulator MgrB | - |
| HV246_RS09030 () | 1936782..1937069 | + | 288 | WP_001006870.1 | YebO family protein | - |
| HV246_RS09035 () | 1937729..1937845 | + | 117 | WP_032141266.1 | YobF family protein | - |
| HV246_RS09040 () | 1937885..1938094 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV246_RS09045 () | 1938261..1939070 | + | 810 | WP_000010094.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV246_RS09050 () | 1939067..1939633 | - | 567 | WP_001027737.1 | manganese efflux pump MntP | - |
| HV246_RS09055 () | 1940051..1940509 | - | 459 | WP_105224305.1 | DUF986 family protein | - |
| HV246_RS09060 () | 1940564..1941415 | - | 852 | WP_001516270.1 | PTS mannose transporter subunit IID | - |
| HV246_RS09065 () | 1941428..1942228 | - | 801 | WP_000406934.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|