MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 131865 bp
Accession: NZ_CP056622 Location: 1050007..1181871 Organism: Citrobacter freundii strain RHBSTW-00310 Replicon: chromosome
Accession: NZ_CP056622 Location: 1050007..1181871 Organism: Citrobacter freundii strain RHBSTW-00310 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV151_RS05030 () | 1046081..1046596 | + | 516 | WP_003037312.1 | S-ribosylhomocysteine lyase | - |
| HV151_RS05035 () | 1046943..1048310 | + | 1368 | WP_048232664.1 | carbohydrate porin | - |
| HV151_RS05040 () | 1048359..1049897 | - | 1539 | WP_003037306.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| HV151_RS05045 () | 1049914..1051086 | - | 1173 | WP_003037303.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| HV151_RS05050 () | 1051217..1051747 | - | 531 | WP_003037300.1 | Transcriptional repressor MprA | VF |
| HV151_RS05055 () | 1051838..1052173 | - | 336 | WP_003037297.1 | L-valine transporter subunit YgaH | - |
| HV151_RS05060 () | 1052163..1052900 | - | 738 | WP_016150871.1 | AzlC family ABC transporter permease | - |
| HV151_RS05065 () | 1053023..1054207 | - | 1185 | WP_044713351.1 | MFS transporter | - |
| HV151_RS05070 () | 1054398..1055393 | - | 996 | WP_043017315.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| HV151_RS05075 () | 1055462..1056526 | - | 1065 | WP_003037285.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| HV151_RS05080 () | 1056519..1057721 | - | 1203 | WP_003037282.1 | Glycine betaine/proline betaine transport system ATP-binding protein ProV | VF |
| HV151_RS05085 () | 1058076..1059035 | - | 960 | WP_048232663.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| HV151_RS05090 () | 1059046..1061190 | - | 2145 | WP_048232661.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| HV151_RS05095 () | 1061163..1061573 | - | 411 | WP_003037273.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| HV151_RS05100 () | 1061570..1061815 | - | 246 | WP_048232659.1 | glutaredoxin-like protein NrdH | - |
| HV151_RS05105 () | 1062091..1062522 | - | 432 | WP_003839686.1 | carboxymuconolactone decarboxylase family protein | - |
| HV151_RS05110 () | 1062613..1063947 | + | 1335 | WP_048217216.1 | PLP-dependent aminotransferase family protein | - |
| HV151_RS05115 () | 1064196..1064546 | + | 351 | WP_044699663.1 | DUF2002 family protein | - |
| HV151_RS05120 () | 1064583..1065032 | - | 450 | WP_003037259.1 | L-alanine exporter AlaE | - |
| HV151_RS05125 () | 1065590..1065991 | + | 402 | WP_003839690.1 | DNA-binding protein StpA | - |
| HV151_RS05130 () | 1066028..1066207 | - | 180 | WP_003037253.1 | hypothetical protein | - |
| HV151_RS05135 () | 1066298..1066825 | - | 528 | WP_016150867.1 | rhodanese family protein | - |
| HV151_RS05140 () | 1066835..1067134 | - | 300 | WP_003037247.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HV151_RS05145 () | 1067320..1067478 | + | 159 | WP_003037242.1 | YqaE/Pmp3 family membrane protein | - |
| HV151_RS05150 () | 1067574..1068023 | + | 450 | WP_003037241.1 | peptidoglycan-binding protein LysM | - |
| HV151_RS05155 () | 1068036..1068722 | - | 687 | WP_016150866.1 | DNA-binding transcriptional regulator CsiR | - |
| HV151_RS05160 () | 1068768..1070168 | - | 1401 | WP_003839698.1 | GABA permease | - |
| HV151_RS05165 () | 1070311..1071594 | - | 1284 | WP_048232657.1 | 4-aminobutyrate aminotransferase GabT | VF |
| HV151_RS05170 () | 1071620..1073068 | - | 1449 | WP_048232656.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| HV151_RS05175 () | 1073092..1074360 | - | 1269 | WP_048232655.1 | L-2-hydroxyglutarate oxidase | - |
| HV151_RS05180 () | 1074380..1075357 | - | 978 | WP_003839704.1 | carbon starvation induced protein CsiD | - |
| HV151_RS05185 () | 1075597..1076310 | - | 714 | WP_003037218.1 | Protein SapB | VF |
| HV151_RS05190 () | 1076342..1077577 | - | 1236 | WP_003037215.1 | MFS transporter | - |
| HV151_RS05195 () | 1077589..1078413 | - | 825 | WP_003037212.1 | hypothetical protein | - |
| HV151_RS05200 () | 1078748..1080922 | + | 2175 | WP_048232653.1 | Catabolite repressor/activator | VF |
| HV151_RS05205 () | 1080975..1081580 | - | 606 | WP_048232651.1 | short chain dehydrogenase | - |
| HV151_RS05210 () | 1081679..1082569 | + | 891 | WP_003037204.1 | HTH-type transcriptional regulator DmlR | VF |
| HV151_RS05215 () | 1082640..1084154 | - | 1515 | WP_003846009.1 | tripartite tricarboxylate transporter permease | - |
| HV151_RS05220 () | 1084165..1084599 | - | 435 | WP_008321484.1 | tripartite tricarboxylate transporter TctB family protein | - |
| HV151_RS05225 () | 1084614..1085591 | - | 978 | WP_003846007.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| HV151_RS05230 () | 1085745..1086419 | + | 675 | WP_003846006.1 | Transcriptional regulatory protein tctD | VF |
| HV151_RS05235 () | 1086406..1087857 | + | 1452 | WP_003846005.1 | sensor histidine kinase | - |
| HV151_RS05240 () | 1087850..1088932 | - | 1083 | WP_048232650.1 | fimbrial protein | - |
| HV151_RS05245 () | 1088943..1091501 | - | 2559 | WP_048217222.1 | Outer membrane usher protein FimD | VF |
| HV151_RS05250 () | 1091515..1092186 | - | 672 | WP_032938091.1 | Chaperone protein FimC | VF |
| HV151_RS05255 () | 1092241..1092828 | - | 588 | WP_048217223.1 | S-fimbrial protein subunit SfaA | VF |
| HV151_RS05260 () | 1093868..1095283 | + | 1416 | WP_048232648.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| HV151_RS05265 () | 1095273..1095581 | + | 309 | Protein_1027 | capsular biosynthesis protein | - |
| HV151_RS05270 () | 1095649..1096652 | + | 1004 | Protein_1028 | IS110 family transposase | - |
| HV151_RS05275 () | 1096896..1097885 | + | 990 | Protein_1029 | outer membrane beta-barrel protein | - |
| HV151_RS05280 () | 1097887..1098444 | + | 558 | WP_003037180.1 | hypothetical protein | VF |
| HV151_RS05285 () | 1098447..1100576 | + | 2130 | WP_048232647.1 | tyrosine-protein kinase domain-containing protein | - |
| HV151_RS05290 () | 1100573..1101784 | + | 1212 | WP_032938083.1 | oligosaccharide flippase family protein | - |
| HV151_RS05295 () | 1101781..1103151 | + | 1371 | WP_048232645.1 | hypothetical protein | - |
| HV151_RS05300 () | 1103156..1104145 | + | 990 | WP_032938081.1 | glycosyltransferase | - |
| HV151_RS05305 () | 1104160..1105371 | + | 1212 | WP_044699634.1 | glycosyltransferase family 4 protein | - |
| HV151_RS05310 () | 1105373..1106485 | + | 1113 | WP_032938077.1 | glycosyltransferase family 4 protein | - |
| HV151_RS05315 () | 1106488..1106895 | + | 408 | WP_032938074.1 | hypothetical protein | - |
| HV151_RS05320 () | 1106926..1108317 | + | 1392 | WP_048232643.1 | DUF4832 domain-containing protein | - |
| HV151_RS05325 () | 1108364..1109380 | - | 1017 | WP_044699629.1 | UDP-glucose 4-epimerase | VF |
| HV151_RS05330 () | 1109448..1110386 | - | 939 | WP_044713272.1 | hypothetical protein | - |
| HV151_RS05335 () | 1110602..1111237 | - | 636 | WP_003037157.1 | carbonic anhydrase | - |
| HV151_RS05340 () | 1111496..1112005 | + | 510 | WP_003839750.1 | hypothetical protein | - |
| HV151_RS05345 () | 1112084..1113832 | - | 1749 | WP_044713271.1 | Regulatory protein AtoC | VF |
| HV151_RS05350 () | 1114214..1115428 | + | 1215 | WP_008321489.1 | diaminopropionate ammonia-lyase | - |
| HV151_RS05355 () | 1115461..1116645 | + | 1185 | WP_003839756.1 | YgeY family selenium metabolism-linked hydrolase | - |
| HV151_RS05360 () | 1116713..1118305 | + | 1593 | WP_003839758.1 | D-aminoacylase | VF |
| HV151_RS05365 () | 1118384..1119670 | + | 1287 | WP_003839760.1 | MFS transporter | - |
| HV151_RS05370 () | 1120140..1120754 | + | 615 | WP_003839762.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| HV151_RS05375 () | 1120759..1124001 | + | 3243 | WP_048232642.1 | Sensor protein EvgS | VF |
| HV151_RS05380 () | 1124076..1124708 | - | 633 | WP_044713267.1 | YfdX family protein | - |
| HV151_RS05385 () | 1124990..1125586 | + | 597 | WP_032949861.1 | DUF308 domain-containing protein | - |
| HV151_RS05390 () | 1125586..1125933 | + | 348 | WP_008321512.1 | ABC transporter substrate-binding protein | - |
| HV151_RS05395 () | 1126141..1129257 | - | 3117 | WP_003839771.1 | Multidrug resistance protein MdtF | VF |
| HV151_RS05400 () | 1129286..1130440 | - | 1155 | WP_003839773.1 | Multidrug resistance protein MdtE | VF |
| HV151_RS05405 () | 1130721..1131287 | - | 567 | WP_003839775.1 | Slp family lipoprotein | - |
| HV151_RS05410 () | 1131532..1132386 | - | 855 | WP_003839777.1 | MurR/RpiR family transcriptional regulator | - |
| HV151_RS05415 () | 1132680..1134185 | + | 1506 | WP_044713261.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| HV151_RS05420 () | 1134197..1136122 | + | 1926 | WP_181553676.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| HV151_RS05425 () | 1136467..1137453 | + | 987 | WP_003845960.1 | inositol 2-dehydrogenase | - |
| HV151_RS05430 () | 1137492..1138421 | + | 930 | WP_032949851.1 | sugar ABC transporter substrate-binding protein | - |
| HV151_RS05435 () | 1138473..1140020 | + | 1548 | WP_003839789.1 | Ribose import ATP-binding protein RbsA | VF |
| HV151_RS05440 () | 1140032..1141060 | + | 1029 | WP_003839791.1 | ABC transporter permease | - |
| HV151_RS05445 () | 1141069..1142202 | + | 1134 | WP_048232637.1 | Gfo/Idh/MocA family oxidoreductase | - |
| HV151_RS05450 () | 1142215..1144119 | + | 1905 | WP_048232635.1 | 5-dehydro-2-deoxygluconokinase | - |
| HV151_RS05455 () | 1144134..1145024 | + | 891 | WP_048232633.1 | myo-inosose-2 dehydratase | - |
| HV151_RS05460 () | 1145034..1145852 | + | 819 | WP_048232631.1 | 5-deoxy-glucuronate isomerase | - |
| HV151_RS05465 () | 1146067..1146432 | - | 366 | Protein_1067 | AIDA-I autotransporter | VF |
| HV151_RS05470 () | 1146440..1146601 | - | 162 | Protein_1068 | integrase arm-type DNA-binding domain-containing protein | - |
| HV151_RS05475 () | 1147108..1147404 | - | 297 | WP_032642920.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV151_RS05480 () | 1147464..1147787 | - | 324 | WP_032642918.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV151_RS05485 () | 1147809..1148030 | - | 222 | WP_032642916.1 | DUF987 domain-containing protein | - |
| HV151_RS05490 () | 1148039..1148509 | - | 471 | WP_032642914.1 | DNA repair protein RadC | - |
| HV151_RS05495 () | 1148542..1149363 | - | 822 | WP_032642912.1 | DUF945 domain-containing protein | - |
| HV151_RS05500 () | 1149584..1150024 | - | 441 | WP_135695985.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| HV151_RS05505 () | 1150185..1151327 | - | 1143 | WP_029602872.1 | nickel/cobalt efflux protein RcnA | - |
| HV151_RS05510 () | 1151340..1151609 | - | 270 | WP_009653703.1 | metal-sensing transcriptional repressor | - |
| HV151_RS05515 () | 1151713..1153011 | - | 1299 | WP_029602873.1 | nickel resistance membrane nickel efflux protein NirA | - |
| HV151_RS05520 () | 1153247..1154005 | - | 759 | WP_029602874.1 | hypothetical protein | - |
| HV151_RS05525 () | 1154059..1154979 | - | 921 | WP_029602875.1 | hypothetical protein | - |
| HV151_RS05530 () | 1155043..1155414 | - | 372 | WP_029602876.1 | hypothetical protein | - |
| HV151_RS05535 () | 1155555..1156244 | - | 690 | WP_029602877.1 | hypothetical protein | - |
| HV151_RS05540 () | 1156258..1156995 | - | 738 | WP_009654087.1 | HupE/UreJ family protein | - |
| HV151_RS05545 () | 1157040..1157405 | - | 366 | WP_029602878.1 | hypothetical protein | - |
| HV151_RS05550 () | 1157749..1158111 | - | 363 | WP_032642906.1 | hypothetical protein | - |
| HV151_RS05555 () | 1158147..1158587 | - | 441 | WP_032642904.1 | hypothetical protein | - |
| HV151_RS05560 () | 1158596..1159282 | - | 687 | WP_032642901.1 | WYL domain-containing protein | - |
| HV151_RS05565 () | 1159302..1160039 | - | 738 | WP_032642899.1 | DUF3944 domain-containing protein | - |
| HV151_RS05570 () | 1160181..1160759 | - | 579 | WP_032642897.1 | hypothetical protein | - |
| HV151_RS05575 () | 1161243..1161875 | + | 633 | WP_071957397.1 | inovirus Gp2 family protein | - |
| HV151_RS05580 () | 1162011..1163450 | - | 1440 | WP_045370402.1 | DUF3987 domain-containing protein | - |
| HV151_RS05585 () | 1163543..1163758 | - | 216 | WP_032642895.1 | AlpA family phage regulatory protein | - |
| HV151_RS05590 () | 1163987..1165168 | + | 1182 | WP_049121588.1 | hypothetical protein | - |
| HV151_RS05595 () | 1165478..1166233 | - | 756 | WP_127348427.1 | hypothetical protein | - |
| HV151_RS05600 () | 1166625..1169249 | - | 2625 | WP_032642889.1 | AAA family ATPase | - |
| HV151_RS05605 () | 1169724..1170809 | + | 1086 | WP_191225808.1 | SIR2 family protein | - |
| HV151_RS05610 () | 1170811..1172556 | + | 1746 | WP_032642885.1 | ATP-binding protein | - |
| HV151_RS05615 () | 1172883..1173920 | - | 1038 | WP_032642883.1 | restriction endonuclease | - |
| HV151_RS05620 () | 1174416..1175524 | + | 1109 | WP_101677551.1 | IS3 family transposase ISBcen15 | Transposase |
| HV151_RS05625 () | 1175632..1176873 | - | 1242 | WP_032642877.1 | Prophage integrase IntA ; Integrase | Integrase |
| HV151_RS05635 () | 1177514..1178677 | - | 1164 | WP_085951585.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HV151_RS05640 () | 1178685..1180871 | - | 2187 | WP_048232581.1 | type I secretion system permease/ATPase | - |
| HV151_RS05645 () | 1180868..1182277 | - | 1410 | WP_003845860.1 | TolC family outer membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|