MGE detailed information
MGE type: Prophage MGE length: 84656 bp
Accession: NZ_CP056597 Location: 2886008..2970663 Organism: Citrobacter freundii strain RHBSTW-00334 Replicon: chromosome
Accession: NZ_CP056597 Location: 2886008..2970663 Organism: Citrobacter freundii strain RHBSTW-00334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV164_RS13690 () | 2881837..2882460 | + | 624 | WP_115258835.1 | transcriptional regulator RcsA | - |
| HV164_RS13695 () | 2882516..2882704 | - | 189 | WP_170974186.1 | protein DsrB | - |
| HV164_RS13700 () | 2882868..2883095 | + | 228 | WP_096757522.1 | YodD family peroxide/acid resistance protein | - |
| HV164_RS13705 () | 2883302..2883481 | - | 180 | WP_170973029.1 | DUF2158 domain-containing protein | - |
| HV164_RS13710 () | 2883559..2884473 | - | 915 | WP_174361098.1 | DUF808 domain-containing protein | - |
| HV164_RS13715 () | 2884648..2885568 | + | 921 | WP_096757525.1 | drug/metabolite exporter YedA | - |
| HV164_RS13720 () | 2885560..2886027 | - | 468 | WP_146717315.1 | very short patch repair endonuclease | - |
| HV164_RS13725 () | 2886008..2887438 | - | 1431 | WP_181219412.1 | DNA cytosine methyltransferase | - |
| HV164_RS13730 () | 2887512..2888207 | - | 696 | WP_181539780.1 | phosphohydrolase | - |
| HV164_RS13735 () | 2888607..2889782 | + | 1176 | WP_181625455.1 | porin OmpC | - |
| HV164_RS13740 () | 2890475..2890687 | + | 213 | WP_096757530.1 | RNA chaperone/antiterminator CspA | - |
| HV164_RS13745 () | 2891475..2891693 | - | 219 | WP_096757531.1 | cold shock domain-containing protein | - |
| HV164_RS13750 () | 2892008..2892276 | + | 269 | Protein_2698 | integrase | - |
| HV164_RS13760 () | 2892740..2894248 | + | 1509 | WP_181539782.1 | DUF4041 domain-containing protein | - |
| HV164_RS13765 () | 2895785..2895997 | + | 213 | WP_048221209.1 | cold shock protein CspG | - |
| HV164_RS13770 () | 2896409..2896621 | + | 213 | WP_048221207.1 | KTSC domain-containing protein | - |
| HV164_RS13780 () | 2898198..2898572 | + | 375 | WP_048221177.1 | FlxA-like family protein | - |
| HV164_RS13785 () | 2898884..2899489 | - | 606 | WP_048221176.1 | hypothetical protein | - |
| HV164_RS13790 () | 2899503..2900543 | - | 1041 | WP_053390175.1 | DUF968 domain-containing protein | - |
| HV164_RS13795 () | 2900540..2900899 | - | 360 | WP_048221174.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV164_RS13800 () | 2900902..2901102 | - | 201 | WP_048221172.1 | hypothetical protein | - |
| HV164_RS13805 () | 2901231..2901476 | - | 246 | WP_048221170.1 | hypothetical protein | - |
| HV164_RS13810 () | 2901520..2901753 | - | 234 | WP_032943871.1 | DinI family protein | - |
| HV164_RS13815 () | 2901983..2902942 | - | 960 | WP_047357956.1 | DUF523 and DUF1722 domain-containing protein | - |
| HV164_RS13820 () | 2903048..2903263 | - | 216 | Protein_2711 | DUF1376 domain-containing protein | - |
| HV164_RS13825 () | 2903318..2903872 | - | 555 | WP_047357953.1 | hypothetical protein | - |
| HV164_RS13830 () | 2903875..2904102 | - | 228 | WP_047357952.1 | helix-turn-helix domain-containing protein | - |
| HV164_RS13835 () | 2904233..2904640 | + | 408 | WP_047358007.1 | helix-turn-helix domain-containing protein | - |
| HV164_RS13840 () | 2904839..2905054 | + | 216 | WP_047357951.1 | hypothetical protein | - |
| HV164_RS13845 () | 2905216..2905554 | + | 339 | WP_136345438.1 | hypothetical protein | - |
| HV164_RS13850 () | 2905566..2905892 | + | 327 | WP_048222630.1 | Rrf2 family transcriptional regulator | - |
| HV164_RS13855 () | 2906034..2908505 | + | 2472 | WP_181625456.1 | exonuclease | - |
| HV164_RS13860 () | 2908576..2908818 | + | 243 | WP_071667664.1 | hypothetical protein ; Integrase | Integrase |
| HV164_RS13865 () | 2908793..2909836 | + | 1044 | WP_048222627.1 | hypothetical protein ; Integrase | Integrase |
| HV164_RS13870 () | 2910164..2910835 | + | 672 | WP_181625457.1 | SOS response-associated peptidase | - |
| HV164_RS13875 () | 2910881..2911555 | - | 675 | WP_181625458.1 | hypothetical protein | - |
| HV164_RS13880 () | 2911627..2912895 | - | 1269 | WP_181625459.1 | Y-family DNA polymerase | - |
| HV164_RS13885 () | 2912898..2913317 | - | 420 | WP_181625460.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV164_RS13890 () | 2913395..2913637 | + | 243 | WP_032943565.1 | DinI family protein | - |
| HV164_RS13895 () | 2913798..2914175 | - | 378 | WP_181625461.1 | DUF1353 domain-containing protein | - |
| HV164_RS13900 () | 2914168..2914752 | - | 585 | WP_181625462.1 | DUF4376 domain-containing protein | - |
| HV164_RS13905 () | 2914752..2916839 | - | 2088 | WP_181625463.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV164_RS13910 () | 2916895..2920317 | - | 3423 | WP_181625464.1 | host specificity protein J | - |
| HV164_RS13915 () | 2920378..2921025 | - | 648 | WP_181625465.1 | tail assembly protein | - |
| HV164_RS13920 () | 2920923..2921666 | - | 744 | WP_181625466.1 | C40 family peptidase | - |
| HV164_RS13925 () | 2921672..2922370 | - | 699 | WP_181625467.1 | phage minor tail protein L | - |
| HV164_RS13930 () | 2922370..2922711 | - | 342 | WP_181625468.1 | phage tail protein | - |
| HV164_RS13935 () | 2922704..2925946 | - | 3243 | WP_181625469.1 | phage tail tape measure protein | - |
| HV164_RS13940 () | 2926008..2926286 | - | 279 | WP_149911493.1 | DUF4035 domain-containing protein | - |
| HV164_RS13945 () | 2926310..2926681 | - | 372 | WP_181625470.1 | phage tail assembly chaperone | - |
| HV164_RS13950 () | 2926696..2927400 | - | 705 | WP_181625471.1 | phage tail protein | - |
| HV164_RS13955 () | 2927460..2927804 | - | 345 | WP_181625472.1 | DUF3168 domain-containing protein | - |
| HV164_RS13960 () | 2927801..2928250 | - | 450 | WP_149911477.1 | HK97 gp10 family phage protein | - |
| HV164_RS13965 () | 2928247..2928585 | - | 339 | WP_149911478.1 | phage head closure protein | - |
| HV164_RS13970 () | 2928594..2928911 | - | 318 | WP_181625473.1 | head-tail connector protein | - |
| HV164_RS13975 () | 2928957..2930183 | - | 1227 | WP_181625474.1 | phage major capsid protein | - |
| HV164_RS13980 () | 2930197..2930847 | - | 651 | WP_181625475.1 | HK97 family phage prohead protease | - |
| HV164_RS13985 () | 2930825..2932066 | - | 1242 | WP_181625476.1 | phage portal protein | - |
| HV164_RS13990 () | 2932066..2932248 | - | 183 | WP_181625477.1 | hypothetical protein | - |
| HV164_RS13995 () | 2932260..2934017 | - | 1758 | WP_181625478.1 | terminase large subunit | - |
| HV164_RS14000 () | 2934017..2934499 | - | 483 | WP_181625479.1 | phage terminase small subunit P27 family | - |
| HV164_RS14005 () | 2934656..2935006 | - | 351 | WP_181625480.1 | HNH endonuclease | - |
| HV164_RS14010 () | 2934994..2935209 | - | 216 | WP_181625481.1 | hypothetical protein | - |
| HV164_RS14015 () | 2935447..2935932 | + | 486 | WP_181625482.1 | GNAT family N-acetyltransferase | - |
| HV164_RS14020 () | 2935936..2936139 | - | 204 | WP_181625891.1 | hypothetical protein | - |
| HV164_RS14025 () | 2936153..2936299 | + | 147 | WP_181625483.1 | hypothetical protein | - |
| HV164_RS14030 () | 2936361..2936906 | - | 546 | WP_181625484.1 | glycoside hydrolase family 108 protein | - |
| HV164_RS14035 () | 2936881..2937186 | - | 306 | WP_181625485.1 | phage holin family protein | - |
| HV164_RS14040 () | 2937176..2937562 | - | 387 | WP_181625486.1 | holin | - |
| HV164_RS14045 () | 2937681..2937863 | + | 183 | WP_019077450.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV164_RS14050 () | 2937888..2938319 | + | 432 | WP_181625487.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV164_RS14055 () | 2938569..2939453 | + | 885 | WP_181625488.1 | hypothetical protein | - |
| HV164_RS14060 () | 2939488..2939832 | - | 345 | WP_048235572.1 | antitermination protein | - |
| HV164_RS14065 () | 2939850..2940839 | - | 990 | WP_181625489.1 | DUF968 domain-containing protein | - |
| HV164_RS14070 () | 2940847..2941656 | - | 810 | WP_181625490.1 | KilA-N domain-containing protein | - |
| HV164_RS14075 () | 2941676..2942065 | - | 390 | WP_181625491.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV164_RS14080 () | 2942062..2942388 | - | 327 | WP_181625492.1 | LexA family transcriptional regulator | - |
| HV164_RS14085 () | 2942385..2942864 | - | 480 | WP_181625493.1 | PerC family transcriptional regulator | - |
| HV164_RS14090 () | 2942867..2943685 | - | 819 | WP_181625494.1 | helix-turn-helix domain-containing protein | - |
| HV164_RS14095 () | 2943903..2945069 | - | 1167 | WP_181625495.1 | Rha family phage regulatory protein | - |
| HV164_RS14100 () | 2945066..2945617 | - | 552 | WP_181625496.1 | hypothetical protein | - |
| HV164_RS14105 () | 2945610..2945870 | - | 261 | WP_169710627.1 | helix-turn-helix domain-containing protein | - |
| HV164_RS14110 () | 2945968..2946660 | + | 693 | WP_181625497.1 | helix-turn-helix transcriptional regulator | - |
| HV164_RS14115 () | 2947354..2947734 | + | 381 | WP_181625498.1 | hypothetical protein | - |
| HV164_RS14120 () | 2947800..2948627 | + | 828 | WP_181625499.1 | DUF2303 family protein | - |
| HV164_RS14125 () | 2948804..2949025 | + | 222 | WP_181625500.1 | DUF4224 domain-containing protein | - |
| HV164_RS14130 () | 2949030..2950025 | + | 996 | WP_181625501.1 | hypothetical protein ; Integrase | Integrase |
| HV164_RS14135 () | 2950070..2950252 | - | 183 | WP_044711150.1 | hypothetical protein | - |
| HV164_RS14140 () | 2950422..2950952 | - | 531 | WP_181625502.1 | hypothetical protein | - |
| HV164_RS14150 () | 2951342..2952139 | + | 798 | WP_181539786.1 | DgsA anti-repressor MtfA | - |
| HV164_RS14160 () | 2952476..2952617 | + | 142 | Protein_2777 | DUF4102 domain-containing protein | - |
| HV164_RS14165 () | 2952770..2955226 | - | 2457 | WP_181625503.1 | ankyrin repeat domain-containing protein | - |
| HV164_RS14170 () | 2955306..2956514 | - | 1209 | WP_181539787.1 | glycosyl transferase | - |
| HV164_RS14175 () | 2956515..2957081 | - | 567 | WP_135912247.1 | hypothetical protein | - |
| HV164_RS14180 () | 2957078..2958127 | - | 1050 | WP_181625892.1 | glycosyltransferase | - |
| HV164_RS14185 () | 2958140..2958835 | - | 696 | Protein_2782 | NAD-dependent epimerase/dehydratase family protein | - |
| HV164_RS14190 () | 2959029..2959982 | - | 954 | WP_115258849.1 | HTH-type transcriptional regulator Cbl | - |
| HV164_RS14195 () | 2960084..2961001 | - | 918 | WP_115258850.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HV164_RS14205 () | 2961618..2962940 | + | 1323 | WP_096757535.1 | shikimate transporter | - |
| HV164_RS14210 () | 2963059..2964513 | + | 1455 | WP_115258852.1 | AMP nucleosidase | - |
| HV164_RS14215 () | 2964529..2966307 | + | 1779 | WP_181539788.1 | aminopeptidase P family protein | - |
| HV164_RS14220 () | 2966363..2967796 | - | 1434 | WP_096757538.1 | PTS glucose transporter subunit IIBC | - |
| HV164_RS14225 () | 2968213..2969010 | - | 798 | WP_135912250.1 | metal-dependent hydrolase | - |
| HV164_RS14230 () | 2969021..2970025 | - | 1005 | WP_181625504.1 | DNA polymerase III subunit delta' | - |
| HV164_RS14235 () | 2970022..2970663 | - | 642 | WP_181505991.1 | dTMP kinase | - |
| HV164_RS14240 () | 2970653..2971675 | - | 1023 | WP_115258857.1 | cell division protein YceG | - |
| HV164_RS14245 () | 2971678..2972487 | - | 810 | WP_096757543.1 | aminodeoxychorismate lyase | - |
| HV164_RS14250 () | 2972616..2973857 | - | 1242 | WP_115258859.1 | beta-ketoacyl-ACP synthase II | - |
| HV164_RS14255 () | 2973943..2974179 | - | 237 | WP_000103754.1 | acyl carrier protein | - |
| HV164_RS14260 () | 2974335..2975069 | - | 735 | WP_096757545.1 | 3-oxoacyl-ACP reductase FabG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|