MGE detailed information
MGE type: Prophage MGE length: 70623 bp
Accession: NZ_CP056592 Location: 2855461..2926083 Organism: Citrobacter freundii strain RHBSTW-00350 Replicon: chromosome
Accession: NZ_CP056592 Location: 2855461..2926083 Organism: Citrobacter freundii strain RHBSTW-00350 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV171_RS13780 () | 2850887..2853520 | + | 2634 | WP_003034947.1 | PqiB family protein | - |
| HV171_RS13785 () | 2853600..2855021 | + | 1422 | WP_071697355.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV171_RS13790 () | 2855122..2855358 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV171_RS13795 () | 2855461..2855652 | + | 192 | WP_003034941.1 | YebW family protein | - |
| HV171_RS13800 () | 2855653..2856294 | - | 642 | WP_071697354.1 | protein-serine/threonine phosphatase | - |
| - () | 2856443..2856586 | + | 144 | - | - | Antitoxin Detail |
| - () | 2856448..2856551 | - | 104 | - | - | Toxin Detail |
| HV171_RS13805 () | 2856707..2857045 | - | 339 | WP_071696726.1 | YebY family protein | - |
| HV171_RS13810 () | 2857066..2857938 | - | 873 | WP_071696727.1 | copper homeostasis membrane protein CopD | - |
| HV171_RS13815 () | 2857942..2858316 | - | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| HV171_RS13820 () | 2858942..2859529 | + | 588 | WP_106107223.1 | hypothetical protein | - |
| HV171_RS13825 () | 2860022..2860213 | + | 192 | WP_008322661.1 | hypothetical protein | - |
| HV171_RS13830 () | 2860533..2861444 | + | 912 | WP_181562371.1 | diguanylate cyclase | - |
| HV171_RS13835 () | 2861798..2862376 | + | 579 | WP_127785922.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HV171_RS13840 () | 2862683..2863408 | - | 726 | WP_046670229.1 | inovirus-type Gp2 protein | - |
| HV171_RS13845 () | 2863826..2865577 | - | 1752 | WP_019076528.1 | hypothetical protein ; Integrase | Integrase |
| HV171_RS13850 () | 2865726..2865956 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV171_RS13855 () | 2866063..2866719 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| HV171_RS13860 () | 2866743..2867405 | + | 663 | WP_071696728.1 | exodeoxyribonuclease X | - |
| HV171_RS13865 () | 2867396..2869450 | - | 2055 | WP_174329907.1 | oligopeptidase B | - |
| HV171_RS13870 () | 2869537..2870196 | - | 660 | WP_048217920.1 | tellurite resistance TerB family protein | - |
| HV171_RS13875 () | 2870291..2870644 | - | 354 | WP_032949525.1 | protein YebF | - |
| HV171_RS13880 () | 2870766..2871056 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV171_RS13885 () | 2871188..2872366 | + | 1179 | WP_071684720.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV171_RS13890 () | 2872435..2873076 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV171_RS13895 () | 2873111..2874922 | - | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| HV171_RS13900 () | 2875156..2876631 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| HV171_RS13905 () | 2876999..2877868 | + | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| HV171_RS13910 () | 2877987..2879429 | + | 1443 | WP_003034890.1 | pyruvate kinase | - |
| HV171_RS13915 () | 2879473..2880444 | - | 972 | WP_071696730.1 | disulfide formation protein | VF |
| HV171_RS13920 () | 2880564..2881883 | - | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| HV171_RS13925 () | 2881899..2882843 | - | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV171_RS13930 () | 2882922..2883677 | + | 756 | WP_071696731.1 | Potassium-transporting ATPase ATP-binding subunit | VF |
| HV171_RS13935 () | 2883674..2884459 | + | 786 | WP_003034874.1 | hypothetical protein | VF |
| HV171_RS13940 () | 2884538..2885548 | - | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HV171_RS13945 () | 2885557..2886168 | - | 612 | WP_071696732.1 | Holliday junction branch migration protein RuvA | - |
| HV171_RS13950 () | 2886249..2886770 | - | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HV171_RS13955 () | 2886805..2887548 | - | 744 | WP_003034865.1 | hypothetical protein | VF |
| HV171_RS13960 () | 2887577..2888020 | - | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| HV171_RS13965 () | 2888022..2889794 | - | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| HV171_RS13970 () | 2890083..2890649 | + | 567 | WP_003034861.1 | hydrolase | - |
| HV171_RS13975 () | 2890972..2891640 | + | 669 | WP_071696733.1 | SOS response-associated peptidase | - |
| HV171_RS13980 () | 2891641..2892030 | - | 390 | WP_071696734.1 | DNA polymerase V | - |
| HV171_RS13985 () | 2892177..2892245 | + | 69 | Protein_2738 | DinI family protein | - |
| HV171_RS13990 () | 2892350..2892592 | + | 243 | WP_000497432.1 | DinI family protein | - |
| HV171_RS13995 () | 2892857..2893117 | + | 261 | WP_048241106.1 | helix-turn-helix domain-containing protein | - |
| HV171_RS14000 () | 2893120..2893629 | + | 510 | WP_081368677.1 | Membrane-bound lytic murein transglycosylase F | VF |
| HV171_RS14005 () | 2893634..2894152 | - | 519 | WP_048241109.1 | tail fiber assembly protein | - |
| HV171_RS14010 () | 2894155..2895432 | - | 1278 | WP_071696472.1 | hypothetical protein | - |
| HV171_RS14015 () | 2895419..2896006 | - | 588 | WP_071696471.1 | DUF2313 domain-containing protein | - |
| HV171_RS14020 () | 2896009..2897088 | - | 1080 | WP_071696470.1 | baseplate J/gp47 family protein | - |
| HV171_RS14025 () | 2897081..2897494 | - | 414 | WP_071696469.1 | phage GP46 family protein | - |
| HV171_RS14030 () | 2897499..2898032 | - | 534 | WP_071696468.1 | phage baseplate assembly protein | - |
| HV171_RS14035 () | 2898032..2899093 | - | 1062 | WP_071696467.1 | baseplate protein | - |
| HV171_RS14040 () | 2899090..2900415 | - | 1326 | WP_071696466.1 | DNA circularization N-terminal domain-containing protein | - |
| HV171_RS14045 () | 2900450..2902360 | - | 1911 | WP_071696465.1 | phage tail tape measure protein | - |
| HV171_RS14050 () | 2902445..2902771 | - | 327 | WP_071696464.1 | phage tail assembly protein | - |
| HV171_RS14055 () | 2902768..2903124 | - | 357 | WP_071696463.1 | phage tail tube protein | - |
| HV171_RS14060 () | 2903125..2904012 | - | 888 | WP_174329909.1 | hypothetical protein | - |
| HV171_RS14065 () | 2904012..2904449 | - | 438 | WP_048241150.1 | phage terminase small subunit P27 family | - |
| HV171_RS14070 () | 2904559..2904921 | - | 363 | WP_099531154.1 | HNH endonuclease | - |
| HV171_RS14075 () | 2904924..2905538 | - | 615 | WP_174329910.1 | methyltransferase domain-containing protein | - |
| HV171_RS14080 () | 2905519..2906355 | - | 837 | WP_174329919.1 | hypothetical protein | - |
| HV171_RS14085 () | 2906393..2906932 | - | 540 | WP_048241158.1 | hypothetical protein | - |
| HV171_RS14090 () | 2906988..2907296 | - | 309 | WP_099531148.1 | hypothetical protein | - |
| HV171_RS14095 () | 2907552..2908130 | + | 579 | WP_174329911.1 | hypothetical protein | - |
| HV171_RS14100 () | 2908163..2908393 | - | 231 | WP_174329912.1 | hypothetical protein | - |
| HV171_RS14105 () | 2908390..2908905 | - | 516 | WP_174329913.1 | DUF2514 domain-containing protein | - |
| HV171_RS14110 () | 2908902..2909450 | - | 549 | WP_174329914.1 | lysozyme | - |
| HV171_RS14115 () | 2909422..2909700 | - | 279 | WP_016150433.1 | hypothetical protein | - |
| HV171_RS14120 () | 2909846..2910898 | - | 1053 | WP_071696462.1 | site-specific DNA-methyltransferase | - |
| HV171_RS14125 () | 2911049..2911240 | - | 192 | WP_003034749.1 | hypothetical protein | - |
| HV171_RS14130 () | 2911511..2912392 | + | 882 | WP_181562372.1 | hypothetical protein | - |
| HV171_RS14135 () | 2912408..2912665 | + | 258 | WP_071696460.1 | hypothetical protein | - |
| HV171_RS14140 () | 2912662..2913060 | + | 399 | WP_071696459.1 | hypothetical protein | - |
| HV171_RS14145 () | 2913092..2913457 | - | 366 | WP_049281731.1 | DUF1133 family protein | - |
| HV171_RS14150 () | 2913475..2914470 | - | 996 | WP_071696458.1 | DUF968 domain-containing protein | - |
| HV171_RS14155 () | 2914467..2915150 | - | 684 | WP_001704138.1 | phage regulatory protein/antirepressor Ant | - |
| HV171_RS14160 () | 2915164..2915550 | - | 387 | WP_003034741.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV171_RS14165 () | 2915547..2916866 | - | 1320 | WP_071696457.1 | phage N-6-adenine-methyltransferase | - |
| HV171_RS14170 () | 2916863..2917723 | - | 861 | WP_071696456.1 | conserved phage C-terminal domain-containing protein | - |
| HV171_RS14175 () | 2917713..2917892 | - | 180 | WP_024135506.1 | DUF4222 domain-containing protein | - |
| HV171_RS14180 () | 2918065..2918616 | - | 552 | WP_071696455.1 | DNA-binding protein | - |
| HV171_RS14185 () | 2918627..2918854 | - | 228 | WP_071696454.1 | cell division protein | - |
| HV171_RS14190 () | 2918956..2919582 | + | 627 | WP_046669973.1 | LexA family transcriptional regulator | - |
| HV171_RS14195 () | 2920574..2920945 | + | 372 | WP_001515608.1 | hypothetical protein | - |
| HV171_RS14200 () | 2921002..2921829 | + | 828 | WP_071696452.1 | DUF2303 family protein | - |
| HV171_RS14205 () | 2921958..2922497 | + | 540 | WP_071696451.1 | hypothetical protein | - |
| HV171_RS14210 () | 2922485..2922661 | + | 177 | WP_001253787.1 | hypothetical protein | - |
| HV171_RS14215 () | 2922658..2922912 | + | 255 | WP_049002620.1 | hypothetical protein | - |
| HV171_RS14220 () | 2922909..2923403 | + | 495 | WP_181562373.1 | hypothetical protein | - |
| HV171_RS14225 () | 2923556..2923792 | + | 237 | Protein_2786 | hypothetical protein | - |
| HV171_RS14230 () | 2924001..2924435 | + | 435 | WP_071696449.1 | hypothetical protein | - |
| HV171_RS14235 () | 2924475..2924711 | + | 237 | WP_003034696.1 | excisionase family protein | - |
| HV171_RS14240 () | 2924770..2926083 | + | 1314 | WP_071696448.1 | Enolase ; Integrase | Integrase |
| HV171_RS14245 () | 2926062..2926835 | + | 774 | WP_071696447.1 | DUF72 domain-containing protein | - |
| HV171_RS14250 () | 2926888..2927283 | + | 396 | WP_003034689.1 | MAPEG family protein | - |
| HV171_RS14255 () | 2927324..2928067 | + | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HV171_RS14260 () | 2928064..2929032 | + | 969 | WP_071696446.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HV171_RS14265 () | 2929276..2930022 | - | 747 | WP_071696445.1 | copper homeostasis protein CutC | - |
| HV171_RS14270 () | 2930025..2930591 | - | 567 | WP_003034677.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|