MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 101715 bp
Accession: NZ_CP056576 Location: 1..101715 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: plasmid pRHBSTW-00370_4
Accession: NZ_CP056576 Location: 1..101715 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: plasmid pRHBSTW-00370_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV178_RS26950 () | 503..2713 | + | 2211 | WP_181553775.1 | peptidase domain-containing ABC transporter | - |
| HV178_RS26955 () | 2720..4255 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV178_RS26960 () | 4305..4652 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HV178_RS26965 () | 4649..5032 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| HV178_RS26970 () | 5112..6062 | - | 951 | WP_181553776.1 | DGQHR domain-containing protein | - |
| HV178_RS26975 () | 6378..6587 | - | 210 | WP_044702641.1 | hypothetical protein | - |
| HV178_RS26980 () | 6614..7009 | - | 396 | WP_044702639.1 | hypothetical protein | - |
| HV178_RS26985 () | 7157..7441 | + | 285 | WP_044702637.1 | hypothetical protein | - |
| HV178_RS26990 () | 7438..7854 | + | 417 | WP_044702636.1 | helix-turn-helix domain-containing protein | - |
| HV178_RS26995 () | 9115..9630 | - | 516 | WP_044702632.1 | hypothetical protein | - |
| HV178_RS27000 () | 9679..9978 | + | 300 | WP_044702631.1 | hypothetical protein | - |
| HV178_RS27005 () | 9984..10688 | - | 705 | WP_044702630.1 | hypothetical protein | - |
| HV178_RS27010 () | 10693..12051 | - | 1359 | WP_044702629.1 | hypothetical protein | - |
| HV178_RS27015 () | 12048..12908 | - | 861 | WP_044702628.1 | ParA family protein | - |
| HV178_RS27020 () | 13145..13525 | + | 381 | WP_044702626.1 | hypothetical protein | - |
| HV178_RS27025 () | 15057..16106 | - | 1050 | WP_049001248.1 | hypothetical protein | - |
| HV178_RS27030 () | 16323..16598 | - | 276 | WP_044702803.1 | hypothetical protein | - |
| HV178_RS27035 () | 16718..17059 | + | 342 | WP_044702805.1 | hypothetical protein | - |
| HV178_RS27040 () | 17139..17465 | + | 327 | WP_044702807.1 | hypothetical protein | - |
| HV178_RS27045 () | 17765..18219 | + | 455 | Protein_20 | hypothetical protein | - |
| HV178_RS27050 () | 18219..19088 | + | 870 | WP_181553777.1 | DsbC family protein | - |
| HV178_RS27055 () | 19103..19504 | + | 402 | WP_044702810.1 | hypothetical protein | - |
| HV178_RS27060 () | 19517..19798 | + | 282 | WP_044702811.1 | hypothetical protein | - |
| HV178_RS27065 () | 19802..20431 | + | 630 | WP_049001244.1 | hypothetical protein | - |
| HV178_RS27070 () | 20465..21259 | + | 795 | WP_044702814.1 | type-F conjugative transfer system secretin TraK | - |
| HV178_RS27075 () | 21259..22500 | + | 1242 | WP_181553778.1 | TraB/VirB10 family protein | - |
| HV178_RS27080 () | 22500..23018 | + | 519 | WP_044702817.1 | TraV family lipoprotein | - |
| HV178_RS27085 () | 23018..25552 | + | 2535 | WP_044702818.1 | TraC family protein | - |
| HV178_RS27090 () | 25556..27574 | + | 2019 | WP_044702819.1 | conjugal transfer protein TraN | - |
| HV178_RS27095 () | 27587..29185 | + | 1599 | WP_181553779.1 | conjugal transfer protein TraN | - |
| HV178_RS27100 () | 29344..30942 | + | 1599 | WP_044702821.1 | TraU family protein | - |
| HV178_RS27105 () | 30985..31398 | + | 414 | WP_049001237.1 | hypothetical protein | - |
| HV178_RS27110 () | 31395..31745 | + | 351 | WP_044702822.1 | hypothetical protein | - |
| HV178_RS27115 () | 31742..32482 | + | 741 | WP_044702823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV178_RS27120 () | 32479..32976 | + | 498 | WP_044702825.1 | S26 family signal peptidase | - |
| HV178_RS27125 () | 33017..33844 | + | 828 | WP_049001233.1 | conjugal transfer protein TraF | - |
| HV178_RS27130 () | 33841..34311 | + | 471 | WP_044702751.1 | conjugal transfer protein TraF | - |
| HV178_RS27135 () | 34321..35709 | + | 1389 | WP_049001281.1 | conjugal transfer protein TraH | - |
| HV178_RS27140 () | 35709..39362 | + | 3654 | WP_181553780.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HV178_RS27145 () | 39464..39652 | + | 189 | WP_049001228.1 | hypothetical protein | - |
| HV178_RS27150 () | 39733..40074 | + | 342 | WP_044702754.1 | hypothetical protein | - |
| HV178_RS27155 () | 40071..40580 | + | 510 | WP_044702755.1 | hypothetical protein | - |
| HV178_RS27160 () | 41271..41474 | - | 204 | WP_072052179.1 | transcriptional regulator | - |
| HV178_RS27165 () | 41487..42866 | - | 1380 | WP_044702757.1 | replicative DNA helicase | - |
| HV178_RS27170 () | 43145..43492 | + | 348 | WP_181553781.1 | hypothetical protein | - |
| HV178_RS27175 () | 43492..44040 | + | 549 | WP_044702759.1 | hypothetical protein | - |
| HV178_RS27180 () | 44112..44528 | - | 417 | WP_181553782.1 | hypothetical protein | - |
| HV178_RS27185 () | 44568..45017 | - | 450 | WP_165712900.1 | hypothetical protein | - |
| HV178_RS27195 () | 47045..48208 | + | 1164 | WP_181553783.1 | 3'-5' exonuclease | - |
| HV178_RS27200 () | 48273..48560 | + | 288 | WP_044702764.1 | hypothetical protein | - |
| HV178_RS27205 () | 48645..48862 | + | 218 | Protein_52 | hypothetical protein | - |
| HV178_RS27210 () | 48918..49154 | + | 237 | WP_044702766.1 | hypothetical protein | - |
| HV178_RS27215 () | 49210..49833 | + | 624 | WP_181553784.1 | hypothetical protein | - |
| HV178_RS27220 () | 49861..50133 | + | 273 | WP_049001188.1 | hypothetical protein | - |
| HV178_RS27225 () | 50145..50915 | + | 771 | WP_049268831.1 | tyrosine-type recombinase/integrase | - |
| HV178_RS27230 () | 50933..51139 | - | 207 | WP_044702771.1 | hypothetical protein | - |
| HV178_RS27235 () | 51158..51373 | - | 216 | WP_044702772.1 | hypothetical protein | - |
| HV178_RS27240 () | 51392..51598 | - | 207 | WP_181553761.1 | hypothetical protein | - |
| HV178_RS27245 () | 51701..52018 | - | 318 | WP_044702775.1 | hypothetical protein | - |
| HV178_RS27250 () | 52061..52537 | - | 477 | WP_044702777.1 | thermonuclease family protein | - |
| HV178_RS27255 () | 52614..52880 | + | 267 | WP_101743108.1 | hypothetical protein | - |
| HV178_RS27260 () | 52891..53178 | + | 288 | WP_044702780.1 | hypothetical protein | - |
| HV178_RS27265 () | 53401..53622 | + | 222 | Protein_64 | hypothetical protein | - |
| HV178_RS27270 () | 53619..54029 | + | 411 | WP_174335011.1 | hypothetical protein | - |
| HV178_RS27275 () | 54040..54546 | + | 507 | WP_044702789.1 | hypothetical protein | - |
| HV178_RS27280 () | 55231..55668 | + | 438 | WP_049001160.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV178_RS27285 () | 55655..56917 | + | 1263 | WP_049001156.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HV178_RS27290 () | 56983..57270 | - | 288 | WP_139395990.1 | hypothetical protein | - |
| HV178_RS27295 () | 57304..57714 | - | 411 | WP_044702888.1 | H-NS histone family protein | - |
| HV178_RS27300 () | 57727..58158 | - | 432 | WP_044702890.1 | hypothetical protein | - |
| HV178_RS27305 () | 58289..59005 | + | 717 | WP_044702892.1 | transglycosylase SLT domain-containing protein | - |
| HV178_RS27310 () | 59002..59376 | + | 375 | WP_044702894.1 | hypothetical protein | - |
| HV178_RS27315 () | 59373..59678 | + | 306 | WP_044702896.1 | hypothetical protein | - |
| HV178_RS27320 () | 59678..60205 | + | 528 | WP_049001153.1 | restriction endonuclease | - |
| HV178_RS27325 () | 60219..61235 | + | 1017 | WP_139395988.1 | hypothetical protein | - |
| HV178_RS27330 () | 61423..61635 | + | 213 | WP_003028810.1 | 50S ribosomal protein L31 | - |
| HV178_RS27335 () | 61708..66717 | - | 5010 | WP_044702901.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV178_RS27340 () | 66717..69062 | - | 2346 | WP_044702902.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HV178_RS27345 () | 69065..69415 | - | 351 | WP_044702903.1 | hypothetical protein | - |
| HV178_RS27350 () | 69964..70491 | - | 528 | WP_181553762.1 | hypothetical protein | - |
| HV178_RS27355 () | 70533..70775 | - | 243 | WP_181553763.1 | hypothetical protein | - |
| HV178_RS27360 () | 70817..71059 | - | 243 | WP_181553763.1 | hypothetical protein | - |
| HV178_RS27365 () | 71101..71481 | - | 381 | WP_181553764.1 | hypothetical protein | - |
| HV178_RS27370 () | 71601..71849 | + | 249 | WP_044702688.1 | hypothetical protein | - |
| HV178_RS27375 () | 72094..72960 | - | 867 | WP_181553765.1 | hypothetical protein | - |
| HV178_RS27380 () | 73948..74358 | - | 411 | WP_181553766.1 | DUF1380 family protein | - |
| HV178_RS27385 () | 74979..75758 | - | 780 | WP_181553767.1 | hypothetical protein | - |
| HV178_RS27390 () | 75918..76766 | - | 849 | WP_181553768.1 | DUF4942 domain-containing protein | - |
| HV178_RS27395 () | 76884..77099 | - | 216 | WP_044702680.1 | hypothetical protein | - |
| HV178_RS27400 () | 77168..77848 | - | 681 | WP_044702678.1 | hypothetical protein | - |
| HV178_RS27405 () | 77946..78194 | - | 249 | WP_044702684.1 | hypothetical protein | - |
| HV178_RS27410 () | 78922..79416 | - | 495 | WP_044702672.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| HV178_RS27415 () | 79441..79785 | - | 345 | WP_044702675.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| HV178_RS27420 () | 80222..80452 | - | 231 | WP_044702671.1 | hypothetical protein | - |
| HV178_RS27425 () | 80443..80706 | - | 264 | WP_044702670.1 | DUF1380 family protein | - |
| HV178_RS27430 () | 80813..81094 | - | 282 | WP_044702669.1 | hypothetical protein | - |
| HV178_RS27435 () | 81242..81760 | - | 519 | WP_181553769.1 | hypothetical protein | - |
| HV178_RS27440 () | 81750..82124 | - | 375 | WP_044702665.1 | hypothetical protein | - |
| HV178_RS27445 () | 82134..82463 | - | 330 | WP_044702664.1 | hypothetical protein | - |
| HV178_RS27450 () | 82477..82827 | - | 351 | WP_181553770.1 | hypothetical protein | - |
| HV178_RS27455 () | 82855..83286 | - | 432 | WP_049002914.1 | antirestriction protein | - |
| HV178_RS27460 () | 84321..84878 | - | 558 | WP_181553771.1 | hypothetical protein | - |
| HV178_RS27465 () | 84946..85431 | - | 486 | WP_181553772.1 | DUF1419 domain-containing protein | - |
| HV178_RS27470 () | 85605..86042 | - | 438 | WP_044702659.1 | hypothetical protein | - |
| HV178_RS27475 () | 86409..86693 | - | 285 | WP_044702657.1 | hypothetical protein | - |
| HV178_RS27480 () | 86937..87602 | - | 666 | WP_181553785.1 | N-6 DNA methylase | - |
| HV178_RS27485 () | 87724..88167 | - | 444 | WP_181553773.1 | hypothetical protein | - |
| HV178_RS27490 () | 88214..88486 | - | 273 | WP_044702653.1 | hypothetical protein | - |
| HV178_RS27495 () | 88535..88978 | - | 444 | WP_044702652.1 | DNA repair protein RadC | - |
| HV178_RS27500 () | 89126..89491 | - | 366 | WP_044702650.1 | hypothetical protein | - |
| HV178_RS27505 () | 90157..90354 | - | 198 | WP_044702648.1 | hypothetical protein | - |
| HV178_RS27510 () | 90377..90565 | - | 189 | WP_044702647.1 | hypothetical protein | - |
| HV178_RS27515 () | 90585..91337 | - | 753 | WP_127785381.1 | cell filamentation protein Fic | - |
| HV178_RS27520 () | 91383..91685 | - | 303 | WP_044702645.1 | hypothetical protein | - |
| HV178_RS27525 () | 91754..93763 | - | 2010 | WP_181553774.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| HV178_RS27530 () | 93885..94157 | - | 273 | WP_044702644.1 | hypothetical protein | - |
| HV178_RS27535 () | 94677..95699 | - | 1023 | WP_001567660.1 | IS110 family transposase ISSm1 | Transposase |
| HV178_RS27540 () | 95723..98761 | - | 3039 | WP_015056823.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HV178_RS27545 () | 98929..99588 | + | 660 | WP_001567320.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HV178_RS27550 () | 100312..100962 | + | 651 | WP_001567322.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|