MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 142000 bp
Accession: NZ_CP056506 Location: 1..142000 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: plasmid pRHBSTW-00449_2
Accession: NZ_CP056506 Location: 1..142000 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: plasmid pRHBSTW-00449_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV201_RS25355 () | 1694..1909 | + | 216 | WP_057102330.1 | DUF2767 family protein | - |
| HV201_RS25360 () | 2229..5360 | + | 3132 | WP_100280316.1 | hypothetical protein | - |
| HV201_RS25365 () | 5469..8441 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HV201_RS25370 () | 8444..9001 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| HV201_RS25375 () | 9131..9343 | - | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| HV201_RS25380 () | 9409..9645 | - | 237 | WP_001087807.1 | broad-spectrum mercury transporter MerE | - |
| HV201_RS25385 () | 9642..10007 | - | 366 | WP_001277463.1 | mercury resistance co-regulator MerD | - |
| HV201_RS25390 () | 10025..11707 | - | 1683 | WP_000281123.1 | mercury(II) reductase | - |
| HV201_RS25395 () | 11746..12153 | - | 408 | WP_000522993.1 | organomercurial transporter MerC | - |
| HV201_RS25400 () | 12181..12456 | - | 276 | WP_000732276.1 | mercury resistance system periplasmic binding protein MerP | - |
| HV201_RS25405 () | 12472..12822 | - | 351 | WP_001294660.1 | mercuric transport protein MerT | - |
| HV201_RS25410 () | 12894..13349 | + | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| HV201_RS25415 () | 13770..14066 | - | 297 | WP_057102331.1 | hypothetical protein | - |
| HV201_RS25420 () | 14164..14916 | - | 753 | WP_072143974.1 | conjugal transfer protein TraX | - |
| HV201_RS25425 () | 15351..15845 | - | 495 | WP_057102333.1 | hypothetical protein | - |
| HV201_RS25430 () | 15883..16389 | - | 507 | WP_057102334.1 | thermonuclease family protein | - |
| HV201_RS25435 () | 16561..16965 | + | 405 | Protein_17 | recombinase family protein | - |
| HV201_RS25440 () | 17093..18226 | - | 1134 | WP_057102335.1 | permease | - |
| HV201_RS25445 () | 18332..18655 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| HV201_RS25450 () | 18756..19466 | + | 711 | WP_057102336.1 | arsenical resistance protein ArsH | - |
| HV201_RS25455 () | 19475..20020 | + | 546 | WP_057102337.1 | sigma-70 family RNA polymerase sigma factor | - |
| HV201_RS25460 () | 20096..20458 | + | 363 | WP_057102338.1 | arsenic metallochaperone ArsD family protein | - |
| HV201_RS25465 () | 20485..22236 | + | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| HV201_RS25470 () | 22310..22678 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| HV201_RS25475 () | 22741..23553 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| HV201_RS25480 () | 23765..24301 | + | 537 | WP_032288325.1 | GNAT family N-acetyltransferase | - |
| HV201_RS25485 () | 24337..24762 | - | 426 | WP_057102339.1 | glutaredoxin-dependent arsenate reductase | - |
| HV201_RS25490 () | 24775..26064 | - | 1290 | WP_011117597.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HV201_RS25495 () | 26112..27863 | - | 1752 | WP_057102340.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HV201_RS25500 () | 27881..28243 | - | 363 | WP_057102341.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HV201_RS25505 () | 28290..28643 | - | 354 | WP_077757418.1 | transcriptional regulator | - |
| HV201_RS25510 () | 28827..29597 | + | 771 | WP_058805867.1 | 4Fe-4S dicluster domain-containing protein | - |
| HV201_RS25515 () | 29601..30608 | + | 1008 | WP_057102343.1 | hypothetical protein | - |
| HV201_RS25520 () | 30605..33631 | + | 3027 | WP_057102344.1 | molybdopterin-dependent oxidoreductase | - |
| HV201_RS25525 () | 33641..34222 | + | 582 | WP_057102345.1 | hypothetical protein | - |
| HV201_RS25530 () | 34342..34776 | - | 435 | WP_057102346.1 | dual specificity protein phosphatase family protein | - |
| HV201_RS25535 () | 36279..36452 | + | 174 | WP_156485358.1 | hypothetical protein | - |
| HV201_RS25540 () | 36541..38079 | - | 1539 | WP_003843773.1 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS25545 () | 38129..38476 | - | 348 | WP_003843771.1 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS25550 () | 38473..38853 | - | 381 | WP_032939119.1 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS25555 () | 39134..39358 | - | 225 | WP_057102348.1 | hypothetical protein | - |
| HV201_RS25560 () | 39468..39947 | - | 480 | WP_057102352.1 | arsenate reductase ArsC | - |
| HV201_RS25565 () | 40087..41315 | + | 1229 | WP_148116659.1 | IS3 family transposase ISEc27 | Transposase |
| HV201_RS25570 () | 41876..42913 | + | 1038 | WP_057064850.1 | hypothetical protein | - |
| HV201_RS25575 () | 43036..43833 | - | 798 | WP_001750026.1 | IS21 family transposase ISEc62 | Transposase |
| HV201_RS25580 () | 43833..45005 | - | 1173 | WP_057064851.1 | IS21 family transposase IS21 | Transposase |
| HV201_RS25585 () | 45376..46338 | - | 963 | WP_057064852.1 | hypothetical protein | - |
| HV201_RS25590 () | 46335..46598 | - | 264 | WP_057064853.1 | hypothetical protein | - |
| HV201_RS25600 () | 48414..48711 | + | 298 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV201_RS25605 () | 48890..49324 | - | 435 | WP_057064174.1 | hypothetical protein | - |
| HV201_RS25610 () | 49540..50940 | - | 1401 | WP_057064175.1 | copper resistance membrane spanning protein PcoS | - |
| HV201_RS25615 () | 50937..51617 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| HV201_RS25620 () | 51672..52601 | - | 930 | WP_057064176.1 | copper resistance inner membrane protein PcoD | - |
| HV201_RS25625 () | 52606..52986 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| HV201_RS25630 () | 53026..53916 | - | 891 | WP_074133539.1 | copper resistance outer membrane transporter PcoB | - |
| HV201_RS25635 () | 53922..55739 | - | 1818 | WP_181522834.1 | multicopper oxidase PcoA | - |
| HV201_RS25640 () | 55974..56423 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| HV201_RS25645 () | 56712..57449 | + | 738 | WP_000287501.1 | Murein DD-endopeptidase MepM | VF |
| HV201_RS25650 () | 57483..57680 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| HV201_RS25655 () | 57721..60168 | - | 2448 | WP_057064177.1 | Ag(+)-translocating P-type ATPase SilP | - |
| HV201_RS25660 () | 60295..60735 | - | 441 | WP_181522835.1 | hypothetical protein | - |
| HV201_RS25665 () | 60822..63968 | - | 3147 | WP_000574029.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| HV201_RS25670 () | 63979..65271 | - | 1293 | WP_000157620.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| HV201_RS25675 () | 65385..65738 | - | 354 | WP_008786772.1 | cation efflux system protein CusF | - |
| HV201_RS25680 () | 65767..67152 | - | 1386 | WP_038633711.1 | Cation efflux system protein CusC | VF |
| HV201_RS25685 () | 67342..68022 | + | 681 | WP_038633715.1 | Transcriptional regulatory protein CusR | VF |
| HV201_RS25690 () | 68015..69490 | + | 1476 | WP_057064178.1 | copper/silver sensor histidine kinase SilS | - |
| HV201_RS25695 () | 69736..70167 | + | 432 | WP_053263389.1 | hypothetical protein | - |
| HV201_RS25700 () | 70313..70663 | + | 351 | WP_007871800.1 | DUF305 domain-containing protein | - |
| HV201_RS25705 () | 71071..71979 | - | 909 | WP_007374408.1 | HNH endonuclease | - |
| HV201_RS25710 () | 73396..73815 | + | 420 | WP_057064180.1 | hypothetical protein | - |
| HV201_RS25715 () | 73862..74284 | + | 423 | WP_057064181.1 | hypothetical protein | - |
| HV201_RS25720 () | 74281..75063 | + | 783 | WP_057064182.1 | site-specific integrase | - |
| HV201_RS25725 () | 75530..76816 | - | 1287 | WP_057064183.1 | DUF1173 family protein | - |
| HV201_RS25730 () | 77036..77662 | + | 627 | WP_008322831.1 | ParA family protein | - |
| HV201_RS25735 () | 77704..77931 | + | 228 | WP_008322833.1 | hypothetical protein | - |
| HV201_RS25740 () | 78453..79205 | - | 753 | WP_057064184.1 | replication initiation protein RepE | - |
| HV201_RS25745 () | 79651..80925 | - | 1275 | WP_057064185.1 | Y-family DNA polymerase | - |
| HV201_RS25750 () | 80925..81347 | - | 423 | WP_057064186.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV201_RS25755 () | 81639..82592 | + | 954 | WP_057064187.1 | plasmid segregation protein ParM | - |
| HV201_RS25760 () | 82598..82972 | + | 375 | WP_057064188.1 | plasmid partitioning/stability family protein | - |
| HV201_RS25765 () | 82974..83303 | + | 330 | WP_057064189.1 | hypothetical protein | - |
| HV201_RS25770 () | 83773..84708 | + | 936 | WP_057064190.1 | DUF1281 domain-containing protein | - |
| HV201_RS25775 () | 84741..85088 | + | 348 | WP_057064191.1 | hypothetical protein | - |
| HV201_RS25780 () | 85465..86145 | + | 681 | WP_057064192.1 | DNA methylase | - |
| HV201_RS25785 () | 86145..86366 | + | 222 | WP_057064193.1 | hypothetical protein | - |
| HV201_RS25790 () | 86411..86830 | + | 420 | WP_057064194.1 | DUF1380 domain-containing protein | - |
| HV201_RS25795 () | 86883..87662 | + | 780 | WP_057064195.1 | hypothetical protein | - |
| HV201_RS25800 () | 88061..88489 | + | 429 | WP_057064196.1 | antirestriction protein | - |
| HV201_RS25805 () | 88556..88978 | + | 423 | WP_071886886.1 | DUF1380 family protein | - |
| HV201_RS25810 () | 89023..89433 | + | 411 | WP_057064197.1 | hypothetical protein | - |
| HV201_RS25815 () | 89447..89638 | + | 192 | WP_057064198.1 | hypothetical protein | - |
| HV201_RS25820 () | 89810..90164 | + | 355 | Protein_94 | DNA polymerase III subunit theta | - |
| HV201_RS25825 () | 90110..90256 | + | 147 | WP_181522836.1 | hypothetical protein | - |
| HV201_RS25830 () | 90834..91061 | + | 228 | WP_057064199.1 | hypothetical protein | - |
| HV201_RS25835 () | 91155..91382 | + | 228 | WP_057064200.1 | hypothetical protein | - |
| HV201_RS25840 () | 91439..92821 | + | 1383 | WP_057064201.1 | DUF3560 domain-containing protein | - |
| HV201_RS25845 () | 92868..93431 | + | 564 | WP_057064202.1 | class I SAM-dependent methyltransferase | - |
| HV201_RS25850 () | 94182..94457 | + | 276 | WP_057064204.1 | hypothetical protein | - |
| HV201_RS25855 () | 94511..94867 | + | 357 | WP_165410135.1 | hypothetical protein | - |
| HV201_RS25860 () | 94936..96954 | + | 2019 | WP_181522832.1 | ParB/RepB/Spo0J family partition protein | - |
| HV201_RS25865 () | 96990..97424 | + | 435 | WP_057064207.1 | conjugation system SOS inhibitor PsiB | - |
| HV201_RS25870 () | 97421..98143 | + | 723 | WP_057064208.1 | plasmid SOS inhibition protein A | - |
| HV201_RS25875 () | 98146..98472 | + | 327 | WP_057102321.1 | hypothetical protein | - |
| - () | 98521..98645 | + | 125 | NuclAT_0 | - | - |
| - () | 98521..98645 | + | 125 | NuclAT_0 | - | - |
| - () | 98521..98645 | + | 125 | NuclAT_0 | - | - |
| - () | 98521..98645 | + | 125 | NuclAT_0 | - | - |
| HV201_RS25880 () | 98749..99036 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HV201_RS25885 () | 99036..99275 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HV201_RS25890 () | 99538..100461 | - | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| HV201_RS25895 () | 100661..101233 | - | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| HV201_RS25900 () | 101876..103216 | - | 1341 | WP_058671058.1 | ISNCY family transposase ISCARN112 | Transposase |
| HV201_RS25905 () | 103304..103462 | + | 159 | WP_023228551.1 | type I toxin-antitoxin system Hok family toxin | - |
| HV201_RS25910 () | 104257..104550 | + | 294 | WP_061548396.1 | hypothetical protein | - |
| HV201_RS25915 () | 104562..105383 | + | 822 | WP_061548395.1 | DUF945 domain-containing protein | - |
| HV201_RS25920 () | 105413..105946 | - | 534 | WP_061548394.1 | hypothetical protein | VF |
| HV201_RS25925 () | 106601..106993 | + | 393 | WP_100280319.1 | relaxosome protein TraM | - |
| HV201_RS25930 () | 107025..107666 | - | 642 | WP_061548344.1 | Arc family DNA-binding protein | - |
| HV201_RS25935 () | 107865..108218 | + | 354 | WP_061548345.1 | conjugal transfer protein TraA | - |
| HV201_RS25940 () | 108221..108523 | + | 303 | WP_061548346.1 | type IV conjugative transfer system protein TraL | - |
| HV201_RS25945 () | 108529..109113 | + | 585 | WP_061548347.1 | conjugal transfer protein TraE | - |
| HV201_RS25950 () | 109125..109865 | + | 741 | WP_061548348.1 | type-F conjugative transfer system secretin TraK | - |
| HV201_RS25955 () | 109862..111271 | + | 1410 | WP_061548349.1 | conjugal transfer protein TraB | - |
| HV201_RS25960 () | 111277..111780 | + | 504 | WP_131403647.1 | hypothetical protein | - |
| HV201_RS25965 () | 111862..112419 | + | 558 | WP_061548351.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HV201_RS25970 () | 112416..112601 | + | 186 | WP_061548352.1 | hypothetical protein | - |
| HV201_RS25975 () | 112598..115201 | + | 2604 | WP_061548353.1 | type IV secretion system protein TraC | - |
| HV201_RS25980 () | 115198..115614 | + | 417 | WP_061548354.1 | type-F conjugative transfer system protein TrbI | - |
| HV201_RS25985 () | 115611..116246 | + | 636 | WP_057102324.1 | type-F conjugative transfer system protein TraW | - |
| HV201_RS25990 () | 116243..116563 | + | 321 | WP_057102325.1 | hypothetical protein | - |
| HV201_RS25995 () | 116554..117021 | + | 468 | WP_057102326.1 | hypothetical protein | - |
| HV201_RS26000 () | 117002..117202 | + | 201 | WP_057102327.1 | hypothetical protein | - |
| HV201_RS26005 () | 117300..117521 | + | 222 | WP_057102328.1 | hypothetical protein | - |
| HV201_RS26010 () | 117570..117893 | + | 324 | WP_057102329.1 | hypothetical protein | - |
| HV201_RS26015 () | 117890..118882 | + | 993 | WP_061548355.1 | conjugal transfer pilus assembly protein TraU | - |
| HV201_RS26020 () | 118893..119513 | + | 621 | WP_061548356.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV201_RS26025 () | 119510..121384 | + | 1875 | WP_100280313.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HV201_RS26030 () | 121381..122163 | + | 783 | WP_061548431.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV201_RS26035 () | 122174..122644 | + | 471 | WP_057064239.1 | hypothetical protein | - |
| HV201_RS26040 () | 122859..123458 | + | 600 | WP_057064240.1 | F-type conjugal transfer protein TrbB | - |
| HV201_RS26045 () | 123476..123745 | + | 270 | WP_057064241.1 | hypothetical protein | - |
| HV201_RS26050 () | 123738..125102 | + | 1365 | WP_181522833.1 | conjugal transfer protein TraH | - |
| HV201_RS26055 () | 125102..128392 | + | 3291 | WP_057064243.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV201_RS26060 () | 128407..128976 | + | 570 | WP_131334063.1 | hypothetical protein | - |
| HV201_RS26065 () | 129281..129838 | + | 558 | Protein_143 | complement resistance protein TraT | - |
| HV201_RS26075 () | 131169..131348 | + | 180 | Protein_145 | complement resistance protein TraT | - |
| HV201_RS26080 () | 131400..131741 | + | 342 | WP_061548330.1 | hypothetical protein | - |
| HV201_RS26085 () | 131738..132049 | - | 312 | WP_057064246.1 | CcdB family protein | - |
| HV201_RS26090 () | 132046..132294 | - | 249 | WP_049271083.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HV201_RS26095 () | 132506..135076 | + | 2571 | WP_057064248.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV201_RS26100 () | 135073..140496 | + | 5424 | WP_061548329.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV201_RS26105 () | 140530..141312 | + | 783 | WP_100280314.1 | DsbA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|