MGE detailed information
MGE type: Prophage MGE length: 57015 bp
Accession: NZ_CP056505 Location: 2694934..2751948 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: chromosome
Accession: NZ_CP056505 Location: 2694934..2751948 Organism: Citrobacter freundii strain RHBSTW-00449 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV201_RS13030 () | 2691325..2692071 | + | 747 | WP_003032398.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| HV201_RS13035 () | 2692158..2692844 | + | 687 | WP_003032396.1 | GntR family transcriptional regulator | - |
| HV201_RS13040 () | 2693024..2693227 | + | 204 | WP_003032393.1 | putative selenium delivery protein YdfZ | - |
| HV201_RS13045 () | 2693303..2694769 | - | 1467 | WP_061548250.1 | fructuronate reductase | - |
| HV201_RS13050 () | 2694934..2696229 | - | 1296 | Protein_2566 | MHS family MFS transporter | - |
| HV201_RS13055 () | 2696833..2696946 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| HV201_RS13060 () | 2697015..2697248 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HV201_RS13065 () | 2697565..2698155 | + | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HV201_RS13070 () | 2698253..2698828 | - | 576 | WP_001439069.1 | tail fiber assembly protein | - |
| HV201_RS13075 () | 2698828..2702358 | - | 3531 | WP_000279149.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV201_RS13080 () | 2702423..2703022 | - | 600 | WP_001568881.1 | hypothetical protein | VF |
| HV201_RS13085 () | 2703090..2706569 | - | 3480 | WP_020239416.1 | host specificity protein J | - |
| HV201_RS13090 () | 2706630..2707262 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| HV201_RS13095 () | 2707199..2707942 | - | 744 | WP_000194780.1 | C40 family peptidase | - |
| HV201_RS13100 () | 2707948..2708646 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| HV201_RS13105 () | 2708646..2708975 | - | 330 | WP_000847331.1 | phage tail protein | - |
| HV201_RS13110 () | 2708972..2711548 | - | 2577 | WP_020239929.1 | phage tail tape measure protein | - |
| HV201_RS13115 () | 2711541..2711975 | - | 435 | WP_000459471.1 | phage tail assembly protein T | - |
| HV201_RS13120 () | 2711957..2712379 | - | 423 | WP_000479135.1 | phage minor tail protein G | - |
| HV201_RS13125 () | 2712395..2713135 | - | 741 | WP_001704476.1 | phage tail protein | - |
| HV201_RS13130 () | 2713143..2713538 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| HV201_RS13135 () | 2713535..2714113 | - | 579 | WP_016245263.1 | phage tail protein | - |
| HV201_RS13140 () | 2714125..2714478 | - | 354 | WP_000752954.1 | head-tail joining protein | - |
| HV201_RS13145 () | 2714490..2714885 | - | 396 | WP_000158882.1 | DNA-packaging protein FI | - |
| HV201_RS13150 () | 2714927..2715952 | - | 1026 | WP_181522526.1 | major capsid protein | - |
| HV201_RS13155 () | 2716008..2716340 | - | 333 | WP_001338090.1 | head decoration protein | - |
| HV201_RS13160 () | 2716350..2717669 | - | 1320 | WP_000123309.1 | S49 family peptidase | - |
| HV201_RS13165 () | 2717650..2719251 | - | 1602 | WP_001338091.1 | phage portal protein | - |
| HV201_RS13170 () | 2719248..2719454 | - | 207 | WP_000198149.1 | gpW family protein | - |
| HV201_RS13175 () | 2719451..2721376 | - | 1926 | WP_001027290.1 | phage terminase large subunit family protein | - |
| HV201_RS13180 () | 2721351..2721896 | - | 546 | WP_000453617.1 | DNA-packaging protein | - |
| HV201_RS13185 () | 2722285..2722479 | + | 195 | WP_032145128.1 | YlcI/YnfO family protein | - |
| HV201_RS13190 () | 2722730..2722936 | - | 207 | WP_020239410.1 | hypothetical protein | - |
| HV201_RS13195 () | 2723232..2723405 | - | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| HV201_RS13200 () | 2723578..2723808 | - | 231 | WP_000720960.1 | hypothetical protein | - |
| HV201_RS13205 () | 2723880..2724068 | - | 189 | WP_071526745.1 | cold-shock protein | - |
| HV201_RS13210 () | 2724079..2724291 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HV201_RS13215 () | 2724655..2725152 | - | 498 | WP_001071777.1 | DUF2514 domain-containing protein | - |
| HV201_RS13220 () | 2725149..2725682 | - | 534 | WP_001092965.1 | lysozyme | - |
| HV201_RS13225 () | 2725738..2726052 | - | 315 | WP_000189909.1 | YdfR family protein | - |
| HV201_RS13230 () | 2726057..2726272 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| HV201_RS13235 () | 2727026..2727241 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| HV201_RS13240 () | 2727542..2727754 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| HV201_RS13245 () | 2727809..2727898 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| HV201_RS13250 () | 2728176..2728928 | - | 753 | WP_001047135.1 | antitermination protein | - |
| HV201_RS13255 () | 2728942..2729991 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| HV201_RS13260 () | 2729993..2730271 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| HV201_RS13265 () | 2730338..2730589 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| HV201_RS13270 () | 2730806..2730961 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HV201_RS13275 () | 2731033..2731320 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HV201_RS13280 () | 2731320..2731559 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HV201_RS13285 () | 2731584..2731889 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| HV201_RS13290 () | 2732092..2732424 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| HV201_RS13295 () | 2732861..2734201 | - | 1341 | WP_000589010.1 | ISNCY family transposase ISCARN112 | Transposase |
| HV201_RS13300 () | 2734235..2734654 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| HV201_RS13305 () | 2734695..2735660 | - | 966 | WP_000054506.1 | hypothetical protein | - |
| HV201_RS13310 () | 2735641..2736162 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| HV201_RS13315 () | 2736146..2736376 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| HV201_RS13320 () | 2736460..2736867 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| HV201_RS13325 () | 2737034..2737189 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| HV201_RS13330 () | 2737191..2737766 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| HV201_RS13335 () | 2738253..2738441 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HV201_RS13340 () | 2738438..2738629 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| HV201_RS13345 () | 2738723..2741194 | + | 2472 | WP_181522527.1 | exonuclease | - |
| HV201_RS13350 () | 2741267..2741518 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| HV201_RS13355 () | 2741553..2742833 | + | 1281 | WP_000877001.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HV201_RS13360 () | 2742853..2742963 | - | 111 | WP_181522528.1 | transporter | - |
| HV201_RS13365 () | 2743016..2743480 | - | 465 | Protein_2629 | zinc-binding dehydrogenase | - |
| HV201_RS13370 () | 2743519..2745057 | - | 1539 | WP_003843773.1 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS13375 () | 2745107..2745454 | - | 348 | WP_003843771.1 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS13385 () | 2746916..2747188 | - | 273 | Protein_2633 | IS66 family transposase ISCfr14 | Transposase |
| HV201_RS13390 () | 2747172..2747821 | - | 650 | Protein_2634 | Zn-dependent oxidoreductase | - |
| HV201_RS13395 () | 2747835..2749049 | - | 1215 | WP_003032386.1 | starvation-sensing protein RspA | - |
| HV201_RS13400 () | 2749158..2749484 | - | 327 | WP_044699845.1 | YnfA family protein | - |
| HV201_RS13405 () | 2749638..2749979 | + | 342 | WP_003032382.1 | DUF1283 family protein | - |
| HV201_RS13410 () | 2750015..2750575 | + | 561 | WP_003032379.1 | spermidine N1-acetyltransferase | - |
| HV201_RS13415 () | 2750583..2751329 | - | 747 | WP_048216478.1 | YnfC family lipoprotein | - |
| HV201_RS13420 () | 2751396..2751704 | + | 309 | WP_085951541.1 | DUF1161 domain-containing protein | - |
| HV201_RS13425 () | 2751853..2754291 | + | 2439 | Protein_2641 | dimethyl sulfoxide reductase subunit A | - |
| HV201_RS13430 () | 2754302..2754919 | + | 618 | WP_061548247.1 | dimethylsulfoxide reductase subunit B | - |
| HV201_RS13435 () | 2754921..2755775 | + | 855 | WP_061548246.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HV201_RS13440 () | 2755818..2756432 | + | 615 | WP_003028918.1 | Tat proofreading chaperone DmsD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|