MGE detailed information
MGE type: IScluster/Tn MGE length: 27932 bp
Accession: NZ_CP056400 Location: 89947..117878 Organism: Citrobacter sp. RHBSTW-00570 Replicon: plasmid pRHBSTW-00570_2
Accession: NZ_CP056400 Location: 89947..117878 Organism: Citrobacter sp. RHBSTW-00570 Replicon: plasmid pRHBSTW-00570_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV237_RS24615 () | 85164..85697 | - | 534 | WP_004357616.1 | MarR family transcriptional regulator | - |
| HV237_RS24620 () | 85954..86850 | + | 897 | WP_011191354.1 | LysR family transcriptional regulator | - |
| HV237_RS24625 () | 86847..87083 | - | 237 | WP_026227538.1 | DUF2274 domain-containing protein | - |
| HV237_RS24630 () | 87086..88306 | - | 1221 | WP_011191355.1 | TrbI/VirB10 family protein | - |
| HV237_RS24635 () | 88303..89352 | - | 1050 | WP_011191356.1 | P-type conjugative transfer protein TrbG | - |
| HV237_RS24640 () | 89349..89669 | - | 321 | Protein_89 | conjugal transfer protein TrbF | - |
| HV237_RS24645 () | 89947..90900 | - | 954 | WP_181541868.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24650 () | 90965..91492 | - | 528 | WP_044258217.1 | hypothetical protein | - |
| HV237_RS24655 () | 91521..92231 | - | 711 | WP_022652302.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV237_RS24660 () | 92233..93438 | - | 1206 | WP_022652303.1 | ABC transporter permease | - |
| HV237_RS24665 () | 93435..94586 | - | 1152 | WP_022652304.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HV237_RS24670 () | 94583..95191 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| HV237_RS24675 () | 95379..96332 | + | 954 | WP_181541868.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24680 () | 96923..97432 | + | 510 | WP_050483874.1 | sigma-70 family RNA polymerase sigma factor | - |
| HV237_RS24685 () | 97589..98488 | + | 900 | Protein_98 | permease | - |
| HV237_RS24690 () | 98529..100064 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV237_RS24695 () | 100114..100461 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HV237_RS24700 () | 100458..100841 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| HV237_RS24705 () | 101049..101279 | + | 231 | WP_021314637.1 | thioredoxin family protein | - |
| HV237_RS24710 () | 101557..101760 | - | 204 | WP_021314636.1 | hypothetical protein | - |
| HV237_RS24715 () | 101842..102669 | - | 828 | WP_032430841.1 | universal stress protein | - |
| HV237_RS24720 () | 102687..104165 | - | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| HV237_RS24725 () | 104672..105694 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| HV237_RS24730 () | 105986..106293 | - | 308 | Protein_107 | IS1 family transposase | - |
| HV237_RS24735 () | 106770..107510 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| HV237_RS24740 () | 107836..108825 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| HV237_RS24745 () | 109681..109950 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV237_RS24750 () | 109954..110484 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV237_RS24755 () | 110616..111509 | + | 894 | WP_161348953.1 | IS5 family transposase IS5D | Transposase |
| HV237_RS24760 () | 111650..112126 | - | 477 | Protein_113 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24765 () | 112207..113715 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV237_RS24770 () | 114388..114817 | - | 430 | Protein_115 | IS3 family transposase | - |
| HV237_RS24775 () | 114881..116032 | + | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| HV237_RS24780 () | 116065..117405 | - | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HV237_RS24785 () | 117636..117878 | - | 243 | Protein_118 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24790 () | 118249..119415 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| HV237_RS24795 () | 119415..120380 | + | 966 | WP_094169339.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV237_RS24800 () | 121113..122155 | - | 1043 | Protein_121 | translesion error-prone DNA polymerase V subunit UmuC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|