MGE detailed information
MGE type: Conjugative plasmid MGE length: 179403 bp
Accession: NZ_CP056400 Location: 1..179403 Organism: Citrobacter sp. RHBSTW-00570 Replicon: plasmid pRHBSTW-00570_2
Accession: NZ_CP056400 Location: 1..179403 Organism: Citrobacter sp. RHBSTW-00570 Replicon: plasmid pRHBSTW-00570_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV237_RS24200 () | 1..942 | + | 942 | WP_165690017.1 | replication initiator protein RepA | - |
| HV237_RS24205 () | 2302..2760 | - | 459 | WP_040190671.1 | helix-turn-helix transcriptional regulator | - |
| HV237_RS24210 () | 2822..3058 | + | 237 | WP_032695943.1 | tautomerase family protein | - |
| HV237_RS24215 () | 3294..3437 | + | 144 | Protein_4 | transposase | - |
| HV237_RS24220 () | 4189..6381 | + | 2193 | WP_181541870.1 | 1,4-alpha-glucan branching enzyme | - |
| HV237_RS24225 () | 6511..7794 | + | 1284 | WP_032690514.1 | glucose-1-phosphate adenylyltransferase | - |
| HV237_RS24230 () | 7884..9317 | + | 1434 | WP_040190721.1 | glycogen synthase GlgA | - |
| HV237_RS24235 () | 9336..11783 | + | 2448 | WP_181541872.1 | glycogen phosphorylase | - |
| HV237_RS24240 () | 11888..13531 | + | 1644 | WP_032743938.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| HV237_RS24245 () | 13625..14101 | - | 477 | Protein_10 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24250 () | 14182..15690 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV237_RS24255 () | 16363..16792 | - | 430 | Protein_12 | IS3 family transposase | - |
| HV237_RS24260 () | 16801..17952 | - | 1152 | WP_048242354.1 | IS30 family transposase IS30H | Transposase |
| HV237_RS24265 () | 18017..18265 | - | 249 | Protein_14 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24270 () | 18403..18972 | + | 570 | WP_040190629.1 | helix-turn-helix transcriptional regulator | - |
| HV237_RS24275 () | 19056..20129 | - | 1074 | WP_075262229.1 | oligosaccharide MFS transporter | - |
| HV237_RS24280 () | 20431..21435 | - | 1005 | WP_117273198.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24285 () | 21701..22300 | + | 600 | WP_032736817.1 | GNAT family N-acetyltransferase | - |
| HV237_RS24290 () | 22480..23502 | + | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| HV237_RS24295 () | 23792..25033 | + | 1242 | Protein_20 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HV237_RS24300 () | 25030..26052 | + | 1023 | WP_000156887.1 | IS110 family transposase IS1618 | Transposase |
| HV237_RS24305 () | 26346..26459 | + | 114 | Protein_22 | IS110 family transposase | - |
| HV237_RS24310 () | 26920..27609 | + | 690 | WP_044351480.1 | DUF4145 domain-containing protein | - |
| HV237_RS24315 () | 27748..28716 | - | 969 | WP_077254959.1 | IS5 family transposase IS903B | Transposase |
| HV237_RS24320 () | 28790..29239 | - | 450 | WP_032420996.1 | hypothetical protein | - |
| HV237_RS24325 () | 29576..31198 | + | 1623 | WP_064154212.1 | hypothetical protein | - |
| HV237_RS24330 () | 31491..32123 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| HV237_RS24335 () | 32152..33555 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| HV237_RS24340 () | 33851..34318 | + | 468 | WP_177339880.1 | hypothetical protein | - |
| HV237_RS24350 () | 35610..36305 | - | 696 | WP_032736820.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HV237_RS24355 () | 36320..36526 | - | 207 | WP_032736819.1 | hypothetical protein | - |
| HV237_RS24360 () | 37183..38187 | - | 1005 | WP_117273198.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24365 () | 38522..39544 | - | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| HV237_RS24370 () | 39830..40198 | - | 369 | WP_032242306.1 | hypothetical protein | - |
| HV237_RS24375 () | 40522..41219 | - | 698 | Protein_36 | IS1 family transposase IS1X2 | Transposase |
| HV237_RS24380 () | 41276..41794 | - | 519 | Protein_37 | PLP-dependent transferase | - |
| HV237_RS24385 () | 41876..43153 | - | 1278 | WP_001515737.1 | serine dehydratase subunit alpha family protein | - |
| HV237_RS24390 () | 43501..44142 | - | 642 | WP_000948259.1 | membrane integrity-associated transporter subunit PqiC | - |
| HV237_RS24395 () | 44142..45080 | - | 939 | WP_000449980.1 | MCE family protein | - |
| HV237_RS24400 () | 45082..45873 | - | 792 | WP_001325019.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV237_RS24405 () | 45879..47024 | - | 1146 | WP_001325018.1 | ABC transporter permease | - |
| HV237_RS24410 () | 47138..47389 | - | 252 | WP_001515736.1 | hypothetical protein | - |
| HV237_RS24415 () | 47448..48152 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV237_RS24420 () | 48206..48616 | + | 411 | Protein_45 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HV237_RS24425 () | 49709..51184 | - | 1476 | WP_020324153.1 | SEC-C domain-containing protein | - |
| HV237_RS24430 () | 52045..52227 | - | 183 | Protein_47 | MerR family transcriptional regulator | - |
| HV237_RS24435 () | 52261..55158 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HV237_RS24440 () | 55253..55858 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| HV237_RS24445 () | 55966..56187 | + | 222 | Protein_50 | IS1 family transposase | - |
| HV237_RS24450 () | 56508..56732 | + | 225 | Protein_51 | MFS transporter | - |
| HV237_RS24455 () | 56763..57164 | - | 402 | WP_004099044.1 | hypothetical protein | - |
| HV237_RS24460 () | 57271..57720 | - | 450 | WP_004099042.1 | hypothetical protein | - |
| HV237_RS24465 () | 57808..58380 | - | 573 | WP_047722653.1 | hypothetical protein | - |
| HV237_RS24470 () | 58472..59440 | - | 969 | WP_002118270.1 | magnesium and cobalt transport protein CorA | - |
| HV237_RS24475 () | 59437..60141 | - | 705 | WP_004099038.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| HV237_RS24480 () | 60277..60813 | - | 537 | Protein_57 | Peptide methionine sulfoxide reductase MsrA | VF |
| HV237_RS24485 () | 60815..61258 | - | 444 | WP_004099035.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| HV237_RS24490 () | 61405..62280 | - | 876 | WP_011191349.1 | LysR family transcriptional regulator | - |
| HV237_RS24495 () | 62509..63618 | + | 1110 | Protein_60 | OsmC family protein | - |
| HV237_RS24500 () | 63942..64163 | - | 222 | Protein_61 | IS1 family transposase | - |
| HV237_RS24505 () | 64618..65970 | - | 1353 | WP_036983243.1 | hypothetical protein | - |
| HV237_RS24510 () | 66153..66368 | - | 216 | Protein_63 | HigA family addiction module antidote protein | - |
| HV237_RS24515 () | 66644..66997 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HV237_RS24520 () | 67045..67407 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HV237_RS24525 () | 67425..69176 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HV237_RS24530 () | 69225..70514 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HV237_RS24535 () | 70527..70952 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| HV237_RS24540 () | 70983..71387 | - | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| HV237_RS24545 () | 71396..71968 | - | 573 | WP_001556711.1 | Tn3 family transposase ISEc63 | Transposase |
| HV237_RS24550 () | 72132..75140 | + | 3009 | WP_136374471.1 | Tn3 family transposase ISEc63 | Transposase |
| HV237_RS24555 () | 75302..75841 | - | 540 | WP_004099036.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| HV237_RS24560 () | 75843..76286 | - | 444 | WP_004099035.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| HV237_RS24565 () | 76411..77442 | + | 1032 | WP_046092923.1 | IS630 family transposase ISEc33 | Transposase |
| HV237_RS24570 () | 77588..78463 | - | 876 | WP_011191349.1 | LysR family transcriptional regulator | - |
| HV237_RS24575 () | 78692..79924 | + | 1233 | WP_004357650.1 | bifunctional alpha/beta hydrolase/OsmC family protein | - |
| HV237_RS24580 () | 79927..80520 | + | 594 | WP_025760400.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| HV237_RS24585 () | 80523..81545 | + | 1023 | WP_004099029.1 | L-threonine 3-dehydrogenase | VF |
| HV237_RS24590 () | 81942..82436 | - | 495 | WP_004099028.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| HV237_RS24595 () | 82753..82935 | - | 183 | WP_004357657.1 | hypothetical protein | - |
| HV237_RS24600 () | 82994..83482 | - | 489 | WP_004099027.1 | DUF417 family protein | - |
| HV237_RS24605 () | 83753..84139 | + | 387 | WP_004099026.1 | hypothetical protein | - |
| HV237_RS24610 () | 84178..85137 | - | 960 | WP_004099025.1 | YeeE/YedE family protein | - |
| HV237_RS24615 () | 85164..85697 | - | 534 | WP_004357616.1 | MarR family transcriptional regulator | - |
| HV237_RS24620 () | 85954..86850 | + | 897 | WP_011191354.1 | LysR family transcriptional regulator | - |
| HV237_RS24625 () | 86847..87083 | - | 237 | WP_026227538.1 | DUF2274 domain-containing protein | - |
| HV237_RS24630 () | 87086..88306 | - | 1221 | WP_011191355.1 | hypothetical protein | VF |
| HV237_RS24635 () | 88303..89352 | - | 1050 | WP_011191356.1 | P-type conjugative transfer protein TrbG | - |
| HV237_RS24640 () | 89349..89669 | - | 321 | Protein_89 | conjugal transfer protein TrbF | - |
| HV237_RS24645 () | 89947..90900 | - | 954 | WP_181541868.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24650 () | 90965..91492 | - | 528 | WP_044258217.1 | hypothetical protein | - |
| HV237_RS24655 () | 91521..92231 | - | 711 | WP_022652302.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV237_RS24660 () | 92233..93438 | - | 1206 | WP_022652303.1 | ABC transporter permease | - |
| HV237_RS24665 () | 93435..94586 | - | 1152 | WP_022652304.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HV237_RS24670 () | 94583..95191 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| HV237_RS24675 () | 95379..96332 | + | 954 | WP_181541868.1 | IS110 family transposase IS4321R | Transposase |
| HV237_RS24680 () | 96923..97432 | + | 510 | WP_050483874.1 | sigma-70 family RNA polymerase sigma factor | - |
| HV237_RS24685 () | 97589..98488 | + | 900 | Protein_98 | permease | - |
| HV237_RS24690 () | 98529..100064 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV237_RS24695 () | 100114..100461 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HV237_RS24700 () | 100458..100841 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| HV237_RS24705 () | 101049..101279 | + | 231 | WP_021314637.1 | thioredoxin family protein | - |
| HV237_RS24710 () | 101557..101760 | - | 204 | WP_021314636.1 | hypothetical protein | - |
| HV237_RS24715 () | 101842..102669 | - | 828 | WP_032430841.1 | universal stress protein | - |
| HV237_RS24720 () | 102687..104165 | - | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| HV237_RS24725 () | 104672..105694 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| HV237_RS24730 () | 105986..106293 | - | 308 | Protein_107 | IS1 family transposase | - |
| HV237_RS24735 () | 106770..107510 | + | 741 | WP_022652310.1 | site-specific integrase | - |
| HV237_RS24740 () | 107836..108825 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| HV237_RS24745 () | 109681..109950 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV237_RS24750 () | 109954..110484 | + | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV237_RS24755 () | 110616..111509 | + | 894 | WP_161348953.1 | IS5 family transposase IS5D | Transposase |
| HV237_RS24760 () | 111650..112126 | - | 477 | Protein_113 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24765 () | 112207..113715 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HV237_RS24770 () | 114388..114817 | - | 430 | Protein_115 | IS3 family transposase | - |
| HV237_RS24775 () | 114881..116032 | + | 1152 | WP_022652315.1 | IS30 family transposase IS30D | Transposase |
| HV237_RS24780 () | 116065..117405 | - | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HV237_RS24785 () | 117636..117878 | - | 243 | Protein_118 | IS3 family transposase ISEhe3 | Transposase |
| HV237_RS24790 () | 118249..119415 | + | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| HV237_RS24795 () | 119415..120380 | + | 966 | WP_094169339.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV237_RS24800 () | 121113..122155 | - | 1043 | Protein_121 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HV237_RS24805 () | 122409..124547 | + | 2139 | WP_022652236.1 | hypothetical protein | - |
| HV237_RS24810 () | 124881..126284 | + | 1404 | WP_072200700.1 | DNA cytosine methyltransferase | - |
| HV237_RS24815 () | 126318..127532 | - | 1215 | WP_176443283.1 | type II site-specific deoxyribonuclease | - |
| HV237_RS24820 () | 127681..129806 | - | 2126 | Protein_125 | tyrosine-type recombinase/integrase | - |
| HV237_RS24825 () | 129790..130794 | - | 1005 | Protein_126 | tyrosine-type recombinase/integrase | - |
| HV237_RS24830 () | 130868..131095 | - | 228 | Protein_127 | DNA polymerase V subunit UmuC | - |
| HV237_RS24835 () | 131095..131517 | - | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV237_RS24840 () | 131697..132368 | - | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| HV237_RS24845 () | 132728..133405 | + | 678 | WP_022652244.1 | DNA methylase | - |
| HV237_RS24850 () | 133405..133626 | + | 222 | WP_022652245.1 | hypothetical protein | - |
| HV237_RS24855 () | 133637..134056 | + | 420 | WP_094169336.1 | DUF1380 domain-containing protein | - |
| HV237_RS24860 () | 134110..134889 | + | 780 | WP_032430832.1 | hypothetical protein | - |
| HV237_RS24865 () | 135296..135802 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| HV237_RS24870 () | 135845..136036 | + | 192 | WP_022652248.1 | hypothetical protein | - |
| HV237_RS24875 () | 136228..136482 | + | 255 | WP_072200699.1 | DNA polymerase III subunit theta | - |
| HV237_RS24880 () | 136517..136834 | + | 318 | WP_032430831.1 | hypothetical protein | - |
| HV237_RS24885 () | 136957..137178 | - | 222 | WP_015062665.1 | hypothetical protein | - |
| HV237_RS24890 () | 137509..138063 | + | 555 | WP_020842505.1 | single-stranded DNA-binding protein | - |
| HV237_RS24895 () | 138116..138358 | + | 243 | WP_032430848.1 | DUF905 domain-containing protein | - |
| HV237_RS24900 () | 138429..140462 | + | 2034 | Protein_141 | ParB/RepB/Spo0J family partition protein | - |
| HV237_RS24905 () | 140503..140937 | + | 435 | WP_086538015.1 | conjugation system SOS inhibitor PsiB | - |
| HV237_RS24910 () | 140934..141662 | + | 729 | WP_032430829.1 | plasmid SOS inhibition protein A | - |
| HV237_RS24915 () | 141659..142012 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| HV237_RS24920 () | 142366..142740 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| HV237_RS24925 () | 143466..143870 | + | 405 | WP_032430828.1 | hypothetical protein | - |
| HV237_RS24930 () | 143927..144274 | + | 348 | WP_032430827.1 | hypothetical protein | - |
| HV237_RS24935 () | 144369..144515 | + | 147 | WP_001159045.1 | hypothetical protein | - |
| HV237_RS24940 () | 144562..145395 | + | 834 | WP_032430826.1 | type I restriction-modification system subunit M | - |
| HV237_RS24945 () | 146042..146572 | + | 531 | WP_032430825.1 | antirestriction protein | - |
| HV237_RS24950 () | 146583..147038 | - | 456 | WP_032430824.1 | hypothetical protein | VF |
| HV237_RS24955 () | 147507..147890 | + | 384 | WP_015062650.1 | relaxosome protein TraM | - |
| HV237_RS24960 () | 148187..148636 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| HV237_RS24965 () | 148842..149075 | + | 234 | WP_032430823.1 | TraY domain-containing protein | - |
| HV237_RS24970 () | 149193..149552 | + | 360 | WP_032430822.1 | type IV conjugative transfer system pilin TraA | - |
| HV237_RS24975 () | 149554..149859 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| HV237_RS24980 () | 149879..150442 | + | 564 | WP_032430821.1 | type IV conjugative transfer system protein TraE | - |
| HV237_RS24985 () | 150432..151172 | + | 741 | WP_032430820.1 | type-F conjugative transfer system secretin TraK | - |
| HV237_RS24990 () | 151159..152520 | + | 1362 | WP_032430819.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HV237_RS24995 () | 152630..152849 | + | 220 | Protein_160 | TraR/DksA C4-type zinc finger protein | - |
| HV237_RS25000 () | 152862..153314 | + | 453 | WP_032430818.1 | hypothetical protein | - |
| HV237_RS25005 () | 153332..153931 | + | 600 | WP_047715683.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HV237_RS25010 () | 153942..156533 | + | 2592 | WP_032430816.1 | type IV secretion system protein TraC | - |
| HV237_RS25015 () | 156530..156994 | + | 465 | WP_032430815.1 | type-F conjugative transfer system protein TrbI | - |
| HV237_RS25020 () | 156994..157629 | + | 636 | WP_032430814.1 | type-F conjugative transfer system protein TraW | - |
| HV237_RS25025 () | 157626..158621 | + | 996 | WP_032430813.1 | conjugal transfer pilus assembly protein TraU | - |
| HV237_RS25030 () | 158632..159000 | + | 369 | WP_032430812.1 | hypothetical protein | - |
| HV237_RS25035 () | 158997..159611 | + | 615 | WP_032430811.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV237_RS25040 () | 159608..161461 | + | 1854 | WP_032430810.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HV237_RS25045 () | 161458..162237 | + | 780 | WP_071446640.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV237_RS25050 () | 162263..162874 | + | 612 | WP_032430808.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HV237_RS25055 () | 162874..164235 | + | 1362 | WP_032430807.1 | F-type conjugal transfer protein TraH | - |
| HV237_RS25060 () | 164237..167134 | + | 2898 | WP_047715678.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV237_RS25065 () | 167146..167706 | + | 561 | WP_047715676.1 | hypothetical protein | - |
| HV237_RS25070 () | 167882..168619 | + | 738 | WP_047715675.1 | complement resistance protein TraT | - |
| HV237_RS25075 () | 168770..171004 | + | 2235 | WP_047715674.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV237_RS25080 () | 171004..176307 | + | 5304 | WP_047715673.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV237_RS25085 () | 176326..176892 | + | 567 | WP_047715672.1 | DUF2726 domain-containing protein | - |
| HV237_RS25090 () | 176889..177620 | + | 732 | WP_071446724.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV237_RS25095 () | 177662..178015 | + | 354 | WP_047715670.1 | hypothetical protein | - |
| HV237_RS25100 () | 178164..178727 | + | 564 | WP_047715669.1 | Cardiolipin synthase A | VF |
| HV237_RS25105 () | 178859..179101 | + | 243 | WP_000078032.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|