MGE detailed information
MGE type: Genomic_island MGE length: 42854 bp
Accession: NZ_CP056399 Location: 953498..996351 Organism: Citrobacter sp. RHBSTW-00570 Replicon: chromosome
Accession: NZ_CP056399 Location: 953498..996351 Organism: Citrobacter sp. RHBSTW-00570 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV237_RS04560 () | 948802..950319 | + | 1518 | WP_005123357.1 | lysine--tRNA ligase | - |
| HV237_RS04565 () | 950405..950953 | - | 549 | WP_047357819.1 | isopentenyl-diphosphate Delta-isomerase | - |
| HV237_RS04570 () | 951120..951878 | + | 759 | WP_046274955.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HV237_RS04580 () | 952227..953405 | + | 1179 | WP_049239070.1 | tyrosine-type recombinase/integrase | - |
| HV237_RS04585 () | 954232..954393 | + | 162 | WP_040216727.1 | hypothetical protein | - |
| HV237_RS04590 () | 954628..955407 | + | 780 | WP_080490680.1 | hypothetical protein | - |
| HV237_RS04595 () | 955482..955964 | + | 483 | WP_047683739.1 | hypothetical protein | - |
| HV237_RS04600 () | 956430..956528 | + | 99 | Protein_902 | IS5/IS1182 family transposase | - |
| HV237_RS04605 () | 956955..958037 | + | 1083 | WP_181541734.1 | hypothetical protein | - |
| HV237_RS04610 () | 958182..959337 | + | 1156 | Protein_904 | IS3 family transposase ISEcl1 | Transposase |
| HV237_RS04615 () | 959434..960714 | - | 1281 | WP_181541736.1 | glucose-1-phosphate adenylyltransferase | - |
| HV237_RS04620 () | 960881..963064 | - | 2184 | WP_031285560.1 | 1,4-alpha-glucan branching enzyme | - |
| HV237_RS04625 () | 963300..963616 | + | 317 | Protein_907 | IS3 family transposase ISAs17 | Transposase |
| HV237_RS04630 () | 963661..964038 | - | 378 | Protein_908 | IS3 family transposase | - |
| HV237_RS04635 () | 964035..965159 | - | 1125 | WP_021314392.1 | ABC transporter permease | - |
| HV237_RS04640 () | 965159..967888 | - | 2730 | WP_021314393.1 | Ribosome-associated ATPase | VF |
| HV237_RS04645 () | 967885..968952 | - | 1068 | WP_028016386.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HV237_RS04650 () | 969338..970141 | - | 804 | Protein_912 | IS5 family transposase | - |
| HV237_RS04655 () | 970351..970668 | + | 318 | WP_014837258.1 | hypothetical protein | - |
| HV237_RS04660 () | 970916..971101 | - | 186 | Protein_914 | fructuronate reductase | - |
| HV237_RS04665 () | 971100..971846 | + | 747 | Protein_915 | IS21 family transposase IS21 | Transposase |
| HV237_RS04670 () | 971934..972590 | - | 657 | WP_125295935.1 | hypothetical protein | - |
| HV237_RS04675 () | 972720..972936 | + | 217 | Protein_917 | helix-turn-helix domain-containing protein | - |
| HV237_RS04680 () | 972970..973443 | - | 474 | Protein_918 | IS66 family transposase ISCro1 | Transposase |
| HV237_RS04685 () | 973445..973507 | - | 63 | WP_071846184.1 | hypothetical protein | - |
| HV237_RS04690 () | 974191..974748 | + | 558 | WP_136895276.1 | Major fimbrial subunit SMF-1 | VF |
| HV237_RS04695 () | 974830..975558 | + | 729 | WP_042933963.1 | putative fimbrial chaperone YadV | VF |
| HV237_RS04700 () | 975634..978195 | + | 2562 | WP_014837265.1 | Outer membrane usher protein HtrE | VF |
| HV237_RS04705 () | 978192..979229 | + | 1038 | WP_181541738.1 | Fimbria adhesin protein | VF |
| HV237_RS04710 () | 979658..980245 | - | 588 | WP_047683733.1 | hypothetical protein | - |
| HV237_RS04715 () | 980468..981181 | - | 714 | WP_042933967.1 | Cyclic di-GMP phosphodiesterase PdeH | VF |
| HV237_RS04720 () | 981197..981599 | - | 403 | Protein_926 | fimbrial protein | - |
| HV237_RS04725 () | 981783..982052 | - | 270 | Protein_927 | IS66 family transposase ISEc49 | Transposase |
| HV237_RS04730 () | 982080..982385 | + | 306 | WP_042933968.1 | HigA family addiction module antidote protein | - |
| HV237_RS04735 () | 982492..982821 | + | 330 | Protein_929 | IS4 family transposase ISIlo1 | Transposase |
| HV237_RS04740 () | 982937..983143 | - | 207 | WP_047725194.1 | AlpA family transcriptional regulator | - |
| HV237_RS04745 () | 983447..983656 | - | 210 | WP_080491305.1 | AlpA family phage regulatory protein | - |
| HV237_RS04750 () | 983781..984503 | + | 723 | WP_080491304.1 | hypothetical protein | - |
| HV237_RS04755 () | 984848..986293 | - | 1446 | WP_080491303.1 | DUF3987 domain-containing protein | - |
| HV237_RS04760 () | 986527..987159 | - | 633 | WP_181541740.1 | inovirus Gp2 family protein | - |
| HV237_RS04765 () | 987749..988573 | + | 825 | WP_049238647.1 | DUF945 domain-containing protein | - |
| HV237_RS04770 () | 988570..988827 | + | 258 | WP_049238645.1 | DUF905 domain-containing protein | - |
| HV237_RS04775 () | 988907..989350 | + | 444 | WP_049238643.1 | antirestriction protein | - |
| HV237_RS04780 () | 989362..989841 | + | 480 | WP_049238640.1 | DNA repair protein RadC | - |
| HV237_RS04785 () | 989855..990076 | + | 222 | WP_049238638.1 | DUF987 domain-containing protein | - |
| HV237_RS04790 () | 990134..990460 | + | 327 | WP_171547612.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV237_RS04795 () | 990517..990906 | + | 390 | WP_049238634.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV237_RS04800 () | 990993..991832 | + | 840 | WP_181541742.1 | DUF4942 domain-containing protein | - |
| HV237_RS04805 () | 993246..993773 | + | 528 | WP_046274927.1 | Vi polysaccharide biosynthesis protein TviA | - |
| HV237_RS04810 () | 994031..995308 | + | 1278 | WP_016157409.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| HV237_RS04815 () | 995311..996351 | + | 1041 | WP_047357818.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| HV237_RS04820 () | 996381..998876 | + | 2496 | WP_135107950.1 | Vi polysaccharide biosynthesis protein TviD | - |
| HV237_RS04825 () | 998876..1000612 | + | 1737 | WP_047357816.1 | Vi polysaccharide biosynthesis glycosyltransferase TviE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|