MGE detailed information
MGE type: Prophage MGE length: 82651 bp
Accession: NZ_CP056314 Location: 2022895..2105545 Organism: Citrobacter freundii strain RHBSTW-00830 Replicon: chromosome
Accession: NZ_CP056314 Location: 2022895..2105545 Organism: Citrobacter freundii strain RHBSTW-00830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV290_RS09520 () | 2019032..2020843 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| HV290_RS09525 () | 2020878..2021519 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV290_RS09530 () | 2021585..2022763 | - | 1179 | WP_181523284.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV290_RS09535 () | 2022895..2023185 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV290_RS09540 () | 2023307..2023660 | + | 354 | WP_032949525.1 | protein YebF | - |
| HV290_RS09545 () | 2023755..2024414 | + | 660 | WP_086529335.1 | tellurite resistance TerB family protein | - |
| HV290_RS09550 () | 2024501..2026555 | + | 2055 | WP_170926220.1 | oligopeptidase B | - |
| HV290_RS09555 () | 2026546..2027208 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| HV290_RS09560 () | 2027232..2027888 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| HV290_RS09565 () | 2027995..2028225 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV290_RS09570 () | 2028369..2028743 | + | 375 | WP_086529333.1 | CopC domain-containing protein YobA | - |
| HV290_RS09575 () | 2028747..2029619 | + | 873 | WP_086529332.1 | copper homeostasis membrane protein CopD | - |
| HV290_RS09580 () | 2029640..2029978 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 2030099..2030240 | - | 142 | - | - | Antitoxin Detail |
| - () | 2030134..2030237 | + | 104 | - | - | Toxin Detail |
| HV290_RS09585 () | 2030370..2031449 | - | 1080 | WP_136397057.1 | hypothetical protein ; Integrase | Integrase |
| HV290_RS09590 () | 2031427..2031687 | - | 261 | WP_072211989.1 | hypothetical protein | - |
| HV290_RS09595 () | 2031751..2034222 | - | 2472 | WP_148373976.1 | exonuclease | - |
| HV290_RS09600 () | 2034364..2034690 | - | 327 | WP_181523356.1 | Rrf2 family transcriptional regulator | - |
| HV290_RS09605 () | 2034748..2034984 | - | 237 | WP_181523363.1 | hypothetical protein | - |
| HV290_RS09610 () | 2035289..2035669 | - | 381 | WP_003832307.1 | helix-turn-helix domain-containing protein | - |
| HV290_RS09615 () | 2035775..2035987 | + | 213 | WP_003832309.1 | helix-turn-helix transcriptional regulator | - |
| HV290_RS09620 () | 2035991..2036545 | + | 555 | WP_181523285.1 | hypothetical protein | - |
| HV290_RS09625 () | 2036600..2037394 | + | 795 | WP_181523286.1 | DUF1376 domain-containing protein | - |
| HV290_RS09630 () | 2037514..2037924 | + | 411 | WP_181523364.1 | hypothetical protein | - |
| HV290_RS09635 () | 2037980..2038405 | + | 426 | WP_181523287.1 | PerC family transcriptional regulator | - |
| HV290_RS09640 () | 2039351..2039671 | + | 321 | WP_181523288.1 | hypothetical protein | - |
| HV290_RS09645 () | 2039677..2042469 | + | 2793 | WP_181523289.1 | hypothetical protein | - |
| HV290_RS09650 () | 2042846..2043148 | + | 303 | WP_181523290.1 | hypothetical protein | - |
| HV290_RS09655 () | 2043194..2044420 | - | 1227 | WP_123924773.1 | hypothetical protein | - |
| HV290_RS09660 () | 2045321..2045521 | + | 201 | WP_048235144.1 | hypothetical protein | - |
| HV290_RS09665 () | 2045524..2045883 | + | 360 | WP_032943869.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV290_RS09670 () | 2045880..2046920 | + | 1041 | WP_181523291.1 | DUF968 domain-containing protein | - |
| HV290_RS09675 () | 2046935..2047513 | + | 579 | WP_181523292.1 | DUF1133 family protein | - |
| HV290_RS09680 () | 2047741..2048553 | - | 813 | WP_181523293.1 | DUF3800 domain-containing protein | - |
| HV290_RS09685 () | 2049081..2049359 | + | 279 | WP_003832349.1 | holin | - |
| HV290_RS09690 () | 2049331..2049879 | + | 549 | WP_181523294.1 | lysozyme | - |
| HV290_RS09695 () | 2049876..2050391 | + | 516 | WP_181523295.1 | DUF2514 domain-containing protein | - |
| HV290_RS09700 () | 2050388..2050618 | + | 231 | WP_019077009.1 | hypothetical protein | - |
| HV290_RS09705 () | 2050651..2051229 | - | 579 | WP_181523296.1 | hypothetical protein | - |
| HV290_RS09710 () | 2051639..2052001 | + | 363 | WP_019077008.1 | hypothetical protein | - |
| HV290_RS09715 () | 2052180..2052356 | + | 177 | WP_181523297.1 | hypothetical protein | - |
| HV290_RS09720 () | 2052369..2053097 | + | 729 | WP_181523298.1 | Fur-regulated protein | - |
| HV290_RS09725 () | 2053274..2053636 | + | 363 | WP_181523299.1 | HNH endonuclease | - |
| HV290_RS09730 () | 2053972..2054406 | + | 435 | WP_042309017.1 | phage terminase small subunit P27 family | - |
| HV290_RS09735 () | 2054406..2055050 | + | 645 | Protein_1903 | terminase large subunit | - |
| HV290_RS09740 () | 2055216..2056451 | + | 1236 | WP_181523300.1 | hypothetical protein ; Integrase | Integrase |
| HV290_RS09745 () | 2056444..2056662 | + | 219 | WP_046878980.1 | AlpA family phage regulatory protein | - |
| HV290_RS09750 () | 2056724..2056963 | + | 240 | WP_181523301.1 | AlpA family phage regulatory protein | - |
| HV290_RS09755 () | 2057290..2058093 | + | 804 | WP_181523302.1 | DUF2971 domain-containing protein | - |
| HV290_RS09760 () | 2058705..2058893 | - | 189 | WP_048226867.1 | DUF3950 domain-containing protein | - |
| HV290_RS09765 () | 2059033..2059275 | + | 243 | WP_181523303.1 | host cell division inhibitor Icd-like protein | - |
| HV290_RS09770 () | 2059268..2059513 | + | 246 | WP_181523304.1 | hypothetical protein | - |
| HV290_RS09775 () | 2059506..2059706 | + | 201 | WP_133086204.1 | hypothetical protein | - |
| HV290_RS09780 () | 2059711..2060010 | + | 300 | WP_181523305.1 | DUF4222 domain-containing protein | - |
| HV290_RS09785 () | 2060007..2061806 | + | 1800 | WP_181523306.1 | DNA primase | - |
| HV290_RS09790 () | 2062084..2062422 | + | 339 | WP_181523307.1 | hypothetical protein | - |
| HV290_RS09795 () | 2062440..2062673 | + | 234 | WP_181523308.1 | hypothetical protein | - |
| HV290_RS09800 () | 2062725..2063246 | - | 522 | WP_181523309.1 | hypothetical protein | - |
| HV290_RS09805 () | 2063511..2064665 | + | 1155 | WP_181523310.1 | phage major capsid protein | - |
| HV290_RS09810 () | 2064710..2065270 | + | 561 | WP_133086975.1 | HK97 family phage prohead protease | - |
| HV290_RS09815 () | 2065272..2066501 | + | 1230 | WP_137380592.1 | phage portal protein | - |
| HV290_RS09820 () | 2066498..2066836 | + | 339 | WP_097505055.1 | phage head closure protein | - |
| HV290_RS09825 () | 2066829..2067119 | + | 291 | WP_001650759.1 | head-tail connector protein | - |
| HV290_RS09830 () | 2067120..2067563 | + | 444 | WP_133086213.1 | HNH endonuclease | - |
| HV290_RS09835 () | 2067704..2068060 | + | 357 | WP_001137908.1 | phage terminase small subunit P27 family | - |
| HV290_RS09840 () | 2068044..2069705 | + | 1662 | WP_181523311.1 | terminase large subunit | - |
| HV290_RS09845 () | 2069774..2070415 | - | 642 | WP_181523312.1 | hypothetical protein | - |
| HV290_RS09850 () | 2070582..2071676 | + | 1095 | Protein_1926 | terminase large subunit | - |
| HV290_RS09855 () | 2071670..2071849 | + | 180 | WP_048233531.1 | hypothetical protein | - |
| HV290_RS09860 () | 2071849..2073105 | + | 1257 | WP_181523313.1 | phage portal protein | - |
| HV290_RS09865 () | 2073142..2074062 | + | 921 | WP_181523314.1 | S49 family peptidase | - |
| HV290_RS09870 () | 2074135..2075421 | + | 1287 | WP_181523315.1 | phage major capsid protein | - |
| HV290_RS09875 () | 2075519..2075890 | + | 372 | WP_119173841.1 | hypothetical protein | - |
| HV290_RS09880 () | 2075871..2076188 | + | 318 | WP_032950890.1 | head-tail connector protein | - |
| HV290_RS09885 () | 2076185..2076535 | + | 351 | WP_058842355.1 | phage head closure protein | - |
| HV290_RS09890 () | 2076504..2076893 | + | 390 | WP_119173840.1 | hypothetical protein | - |
| HV290_RS09895 () | 2076890..2077291 | + | 402 | WP_003832376.1 | HK97 gp10 family phage protein | - |
| HV290_RS09900 () | 2077325..2077807 | + | 483 | WP_003832379.1 | hypothetical protein | - |
| HV290_RS09905 () | 2077870..2078232 | + | 363 | WP_181523316.1 | phage tail protein | - |
| HV290_RS09910 () | 2078480..2081782 | + | 3303 | WP_181523317.1 | phage tail tape measure protein | - |
| HV290_RS09915 () | 2081783..2082115 | + | 333 | WP_032949490.1 | phage tail protein | - |
| HV290_RS09920 () | 2082124..2082819 | + | 696 | WP_181523318.1 | phage minor tail protein L | - |
| HV290_RS09925 () | 2082831..2083565 | + | 735 | WP_048233544.1 | C40 family peptidase | - |
| HV290_RS09930 () | 2083463..2084140 | + | 678 | WP_181523319.1 | tail assembly protein | - |
| HV290_RS09935 () | 2084213..2087617 | + | 3405 | WP_181523320.1 | host specificity protein J | - |
| HV290_RS09940 () | 2087658..2090378 | + | 2721 | WP_048233547.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV290_RS09945 () | 2090378..2090959 | + | 582 | WP_048233548.1 | tail fiber assembly protein | - |
| HV290_RS09950 () | 2091193..2091567 | + | 375 | WP_016150400.1 | hypothetical protein | - |
| HV290_RS09955 () | 2091735..2091974 | - | 240 | Protein_1947 | DinI-like family protein | - |
| HV290_RS09960 () | 2092032..2092466 | - | 435 | WP_087878716.1 | Acetyltransferase YpeA | ARG |
| HV290_RS09965 () | 2093041..2094411 | - | 1371 | WP_032949068.1 | adenylosuccinate lyase | - |
| HV290_RS09970 () | 2094415..2095056 | - | 642 | WP_003841885.1 | high frequency lysogenization protein HflD | - |
| HV290_RS09975 () | 2095091..2096197 | - | 1107 | WP_003832402.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| HV290_RS09980 () | 2096251..2096712 | - | 462 | WP_032949069.1 | NUDIX hydrolase | - |
| HV290_RS09985 () | 2096722..2097654 | - | 933 | WP_052946586.1 | hypothetical protein | - |
| HV290_RS09990 () | 2097689..2098306 | - | 618 | WP_048233556.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| HV290_RS09995 () | 2098509..2099759 | + | 1251 | WP_003030769.1 | NADP-dependent isocitrate dehydrogenase | - |
| HV290_RS10000 () | 2099895..2100404 | - | 510 | WP_071698039.1 | VTT domain-containing protein | - |
| HV290_RS10005 () | 2100579..2100821 | - | 243 | WP_003840850.1 | DinI family protein | - |
| HV290_RS10010 () | 2100900..2101132 | + | 233 | Protein_1958 | DNA polymerase V | - |
| HV290_RS10015 () | 2101209..2101907 | - | 699 | WP_016150087.1 | arsenical resistance protein ArsH | - |
| HV290_RS10020 () | 2101993..2102313 | + | 321 | WP_003030762.1 | transcriptional regulator | - |
| HV290_RS10025 () | 2102358..2103647 | + | 1290 | WP_016150088.1 | arsenic transporter | - |
| HV290_RS10030 () | 2103660..2104085 | + | 426 | WP_003030760.1 | glutaredoxin-dependent arsenate reductase | - |
| HV290_RS10035 () | 2104329..2104541 | + | 213 | WP_016150089.1 | isocitrate dehydrogenase (NADP(+)) | - |
| HV290_RS10040 () | 2105051..2105545 | + | 495 | WP_016150090.1 | hypothetical protein | VF |
| HV290_RS10045 () | 2105556..2105810 | + | 255 | WP_003846687.1 | hypothetical protein | - |
| HV290_RS10050 () | 2105871..2105972 | - | 102 | Protein_1966 | cytochrome b | - |
| HV290_RS10055 () | 2106077..2106349 | - | 273 | WP_003030757.1 | hypothetical protein | - |
| HV290_RS10060 () | 2106589..2108112 | + | 1524 | WP_086529185.1 | cyclic diguanylate phosphodiesterase | - |
| HV290_RS10065 () | 2108282..2108479 | + | 198 | WP_086529186.1 | hypothetical protein | - |
| HV290_RS10070 () | 2108511..2109287 | - | 777 | WP_086529187.1 | 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|