MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82097 bp
Accession: NZ_CP056259 Location: 1..82097 Organism: Citrobacter freundii strain RHBSTW-00902 Replicon: plasmid pRHBSTW-00902_4
Accession: NZ_CP056259 Location: 1..82097 Organism: Citrobacter freundii strain RHBSTW-00902 Replicon: plasmid pRHBSTW-00902_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV319_RS26605 () | 804..1754 | - | 951 | WP_003846751.1 | HTH-type transcriptional regulator Cbl | - |
| HV319_RS26610 () | 1856..2773 | - | 918 | WP_003030855.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HV319_RS26620 () | 3248..3580 | - | 333 | WP_003836692.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HV319_RS26625 () | 3581..3838 | - | 258 | WP_003836694.1 | hypothetical protein | Antitoxin Detail |
| HV319_RS26630 () | 4562..5259 | + | 698 | Protein_5 | IS1 family transposase | - |
| HV319_RS26635 () | 5277..9128 | + | 3852 | Protein_6 | hypothetical protein | - |
| HV319_RS26640 () | 9133..11571 | + | 2439 | WP_181502640.1 | hypothetical protein | - |
| HV319_RS26645 () | 11623..12574 | + | 952 | Protein_8 | IS3 family transposase | - |
| HV319_RS26650 () | 12786..13856 | + | 1071 | WP_001180631.1 | IS110 family transposase ISLxx2 | Transposase |
| HV319_RS26655 () | 13864..14079 | + | 216 | Protein_10 | IS3 family transposase ISLad1 | Transposase |
| HV319_RS26660 () | 14086..14985 | + | 900 | Protein_11 | sensor domain-containing diguanylate cyclase | - |
| HV319_RS26665 () | 15033..15131 | + | 99 | WP_032941789.1 | YoaK family small membrane protein | - |
| HV319_RS26670 () | 15156..15209 | + | 54 | WP_181502642.1 | hypothetical protein | - |
| HV319_RS26675 () | 15259..15507 | - | 249 | WP_003030729.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| HV319_RS26680 () | 15867..18014 | + | 2148 | WP_103849177.1 | formate dehydrogenase subunit alpha | - |
| HV319_RS26685 () | 18067..18711 | - | 645 | WP_003840864.1 | hypothetical protein | - |
| HV319_RS26690 () | 18928..19110 | - | 183 | WP_003840863.1 | DUF1869 domain-containing protein | - |
| HV319_RS26695 () | 19114..19476 | - | 363 | WP_003030735.1 | DUF1971 domain-containing protein YeaR | - |
| HV319_RS26700 () | 19651..20289 | - | 639 | WP_003840862.1 | leucine efflux protein LeuE | - |
| HV319_RS26705 () | 20429..21079 | - | 651 | WP_048219059.1 | metal-binding protein ZinT | - |
| HV319_RS26710 () | 21169..21759 | - | 591 | WP_003030739.1 | ATP-binding cassette domain-containing protein | - |
| HV319_RS26715 () | 21743..22537 | - | 795 | WP_103849242.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| HV319_RS26720 () | 22531..23343 | - | 813 | WP_103849243.1 | ABC transporter permease | - |
| HV319_RS26725 () | 23333..24307 | - | 975 | WP_149911491.1 | ABC transporter permease | - |
| HV319_RS26730 () | 24307..25929 | - | 1623 | WP_048233562.1 | ABC transporter substrate-binding protein | - |
| HV319_RS26735 () | 26325..28412 | + | 2088 | WP_032936136.1 | TonB-dependent receptor | - |
| HV319_RS26740 () | 28528..28725 | - | 198 | WP_061549978.1 | hypothetical protein | - |
| HV319_RS26745 () | 28895..30417 | - | 1523 | Protein_28 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| HV319_RS26750 () | 30657..30929 | + | 273 | WP_003030757.1 | hypothetical protein | - |
| HV319_RS26755 () | 31195..31449 | - | 255 | WP_003846687.1 | hypothetical protein | - |
| HV319_RS26760 () | 31460..31954 | - | 495 | WP_016150090.1 | Outer membrane protein X | VF |
| HV319_RS26765 () | 32477..32590 | - | 114 | Protein_32 | isocitrate dehydrogenase | - |
| HV319_RS26770 () | 32834..33259 | - | 426 | WP_103849213.1 | glutaredoxin-dependent arsenate reductase | - |
| HV319_RS26775 () | 33272..34561 | - | 1290 | WP_103849215.1 | arsenic transporter | - |
| HV319_RS26780 () | 34606..34926 | - | 321 | WP_003030762.1 | transcriptional regulator | - |
| HV319_RS26785 () | 35012..35710 | + | 699 | WP_061549503.1 | arsenical resistance protein ArsH | - |
| HV319_RS26790 () | 35787..36019 | - | 233 | Protein_37 | DNA polymerase V | - |
| HV319_RS26795 () | 36098..36340 | + | 243 | WP_003840850.1 | DinI family protein | - |
| HV319_RS26800 () | 36515..37024 | + | 510 | WP_003030767.1 | VTT domain-containing protein | - |
| HV319_RS26805 () | 37160..38410 | - | 1251 | WP_003030769.1 | NADP-dependent isocitrate dehydrogenase | - |
| HV319_RS26810 () | 38613..39230 | + | 618 | WP_003846701.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| HV319_RS26815 () | 39265..40197 | + | 933 | WP_003846703.1 | hypothetical protein | - |
| HV319_RS26820 () | 40207..40668 | + | 462 | WP_003841887.1 | NUDIX hydrolase | - |
| HV319_RS26825 () | 40722..41828 | + | 1107 | WP_003832402.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| HV319_RS26830 () | 41863..42504 | + | 642 | WP_003841885.1 | high frequency lysogenization protein HflD | - |
| HV319_RS26835 () | 42508..43878 | + | 1371 | WP_003846707.1 | adenylosuccinate lyase | - |
| HV319_RS26840 () | 44043..44714 | + | 672 | WP_003030783.1 | Transcriptional regulatory protein PhoP | VF |
| HV319_RS26845 () | 44714..46177 | + | 1464 | WP_016150060.1 | two-component system sensor histidine kinase PhoQ | - |
| HV319_RS26850 () | 46270..47391 | + | 1122 | WP_003030786.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| HV319_RS26855 () | 47494..48720 | - | 1227 | WP_032936142.1 | peptidase T | - |
| HV319_RS26860 () | 48971..50107 | + | 1137 | WP_003030791.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HV319_RS26865 () | 50091..50948 | + | 858 | WP_003030793.1 | spermidine/putrescine ABC transporter permease PotB | - |
| HV319_RS26870 () | 50945..51724 | + | 780 | WP_003030794.1 | spermidine/putrescine ABC transporter permease PotC | - |
| HV319_RS26875 () | 51752..52798 | + | 1047 | WP_103849020.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| HV319_RS26880 () | 52898..53719 | - | 822 | WP_003030799.1 | NAD-dependent protein deacylase | - |
| HV319_RS26885 () | 53735..54646 | - | 912 | WP_003030802.1 | N-acetylglucosamine kinase | - |
| HV319_RS26890 () | 54736..55980 | - | 1245 | WP_103849014.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| HV319_RS26895 () | 55980..56681 | - | 702 | WP_003030805.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HV319_RS26900 () | 56674..57873 | - | 1200 | WP_003030806.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| HV319_RS26905 () | 58135..59199 | + | 1065 | WP_003846719.1 | acyltransferase family protein | - |
| HV319_RS26910 () | 59318..62764 | + | 3447 | WP_181502641.1 | transcription-repair coupling factor | - |
| HV319_RS26915 () | 62914..63879 | + | 966 | WP_048241193.1 | L,D-transpeptidase family protein | - |
| HV319_RS26920 () | 63965..64222 | - | 258 | WP_003030810.1 | DUF1471 domain-containing protein | - |
| HV319_RS26925 () | 64466..65101 | + | 636 | WP_016149993.1 | HTH-type transcriptional repressor ComR | VF |
| HV319_RS26930 () | 65356..67536 | + | 2181 | WP_032936147.1 | Ferric aerobactin receptor | VF |
| HV319_RS26935 () | 67594..68133 | - | 540 | WP_032936150.1 | glycine zipper 2TM domain-containing protein | - |
| HV319_RS26940 () | 68302..69606 | - | 1305 | WP_181502637.1 | NADH-quinone dehydrogenase | - |
| HV319_RS26945 () | 69843..70385 | - | 543 | WP_003030817.1 | alpha/beta hydrolase YcfP | - |
| HV319_RS26950 () | 70407..71432 | - | 1026 | WP_003841848.1 | beta-N-acetylhexosaminidase | - |
| HV319_RS26955 () | 71443..72267 | - | 825 | WP_181502638.1 | thiamine kinase | - |
| HV319_RS26960 () | 72248..72889 | - | 642 | WP_003846732.1 | penicillin-binding protein activator LpoB | - |
| HV319_RS26965 () | 72903..73277 | - | 375 | WP_003030823.1 | YcfL family protein | - |
| HV319_RS26970 () | 73280..73639 | - | 360 | WP_003030826.1 | purine nucleoside phosphoramidase | - |
| HV319_RS26975 () | 73911..74801 | - | 891 | WP_032936156.1 | HTH-type transcriptional regulator CatM | VF |
| HV319_RS26980 () | 74948..75547 | + | 600 | WP_048216605.1 | cysteine hydrolase | - |
| HV319_RS26985 () | 75544..76581 | + | 1038 | WP_003846740.1 | hydrogenase expression/formation protein HypE | - |
| HV319_RS26990 () | 76553..78919 | + | 2367 | WP_181502639.1 | carbamoyltransferase HypF | - |
| HV319_RS26995 () | 78912..79631 | + | 720 | WP_032936159.1 | HAD family phosphatase | - |
| HV319_RS27000 () | 79649..80818 | + | 1170 | WP_032936161.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|