MGE detailed information
MGE type: Prophage MGE length: 129218 bp
Accession: NZ_CP056245 Location: 2086924..2216141 Organism: Citrobacter freundii strain RHBSTW-00915 Replicon: chromosome
Accession: NZ_CP056245 Location: 2086924..2216141 Organism: Citrobacter freundii strain RHBSTW-00915 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV325_RS10095 () | 2082416..2082982 | + | 567 | WP_003034677.1 | VOC family protein | - |
| HV325_RS10100 () | 2082985..2083731 | + | 747 | WP_044711084.1 | copper homeostasis protein CutC | - |
| HV325_RS10105 () | 2083975..2084943 | - | 969 | WP_049016037.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HV325_RS10110 () | 2084940..2085683 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HV325_RS10115 () | 2085724..2086119 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| HV325_RS10120 () | 2086172..2086945 | - | 774 | WP_175420721.1 | DUF72 domain-containing protein | - |
| HV325_RS10125 () | 2086924..2088237 | - | 1314 | WP_047400034.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HV325_RS10130 () | 2088293..2088529 | - | 237 | WP_019077032.1 | excisionase family protein | - |
| HV325_RS10135 () | 2088685..2088996 | - | 312 | WP_016150521.1 | hypothetical protein | - |
| HV325_RS10140 () | 2088996..2089457 | - | 462 | WP_097724899.1 | ATPase | - |
| HV325_RS10145 () | 2089454..2089666 | - | 213 | WP_059444897.1 | hypothetical protein | - |
| HV325_RS10150 () | 2089884..2090324 | - | 441 | WP_097724901.1 | hypothetical protein | - |
| HV325_RS10155 () | 2090306..2091064 | - | 759 | WP_078310261.1 | hypothetical protein | - |
| HV325_RS10160 () | 2091057..2091341 | - | 285 | WP_139762559.1 | hypothetical protein | - |
| HV325_RS10165 () | 2091347..2091853 | - | 507 | WP_115333152.1 | hypothetical protein | - |
| HV325_RS10170 () | 2092040..2092291 | - | 252 | WP_181512408.1 | hypothetical protein | - |
| HV325_RS10175 () | 2092291..2092647 | - | 357 | WP_142972744.1 | hypothetical protein | - |
| HV325_RS10180 () | 2092766..2093035 | - | 270 | WP_181512409.1 | hypothetical protein | - |
| HV325_RS10185 () | 2093105..2093398 | - | 294 | WP_177712317.1 | hypothetical protein | - |
| HV325_RS10190 () | 2093570..2094262 | - | 693 | WP_177712316.1 | helix-turn-helix transcriptional regulator | - |
| HV325_RS10195 () | 2094416..2094631 | + | 216 | WP_177712999.1 | helix-turn-helix domain-containing protein | - |
| HV325_RS10200 () | 2094633..2094842 | + | 210 | WP_181512410.1 | DUF4222 domain-containing protein | - |
| HV325_RS10205 () | 2094835..2095857 | + | 1023 | WP_181512411.1 | hypothetical protein | - |
| HV325_RS10210 () | 2095964..2097835 | + | 1872 | WP_071684501.1 | toprim domain-containing protein | - |
| HV325_RS10215 () | 2097838..2098161 | + | 324 | WP_115333158.1 | hypothetical protein | - |
| HV325_RS10220 () | 2098158..2098973 | + | 816 | WP_115333159.1 | antitermination protein | - |
| HV325_RS10225 () | 2099289..2099501 | - | 213 | WP_032652457.1 | KTSC domain-containing protein | - |
| HV325_RS10230 () | 2100051..2100251 | + | 201 | WP_097363123.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV325_RS10240 () | 2101938..2102108 | - | 171 | WP_077628410.1 | DUF2116 family Zn-ribbon domain-containing protein | - |
| HV325_RS10245 () | 2102413..2102901 | + | 489 | WP_071701194.1 | HNH endonuclease | - |
| HV325_RS10250 () | 2102946..2103224 | + | 279 | WP_001568784.1 | holin | - |
| HV325_RS10255 () | 2103196..2103744 | + | 549 | WP_181512412.1 | lysozyme | - |
| HV325_RS10260 () | 2103723..2104253 | + | 531 | WP_142710334.1 | DUF2514 domain-containing protein | - |
| HV325_RS10265 () | 2104253..2104483 | + | 231 | WP_142710338.1 | hypothetical protein | - |
| HV325_RS10270 () | 2104503..2104736 | + | 234 | WP_181512413.1 | hypothetical protein | - |
| HV325_RS10275 () | 2104724..2105074 | + | 351 | WP_181512414.1 | HNH endonuclease | - |
| HV325_RS10280 () | 2105231..2105728 | + | 498 | WP_136397982.1 | phage terminase small subunit P27 family | - |
| HV325_RS10285 () | 2105728..2107485 | + | 1758 | WP_181512415.1 | terminase large subunit | - |
| HV325_RS10290 () | 2107496..2107681 | + | 186 | WP_008323320.1 | hypothetical protein | - |
| HV325_RS10295 () | 2107681..2108910 | + | 1230 | WP_136397984.1 | phage portal protein | - |
| HV325_RS10300 () | 2108897..2109550 | + | 654 | WP_136397985.1 | HK97 family phage prohead protease | - |
| HV325_RS10305 () | 2109564..2110772 | + | 1209 | WP_136397986.1 | phage major capsid protein | - |
| HV325_RS10310 () | 2110811..2111017 | + | 207 | WP_181512416.1 | hypothetical protein | - |
| HV325_RS10315 () | 2111014..2111337 | + | 324 | WP_181512417.1 | head-tail connector protein | - |
| HV325_RS10320 () | 2111347..2111685 | + | 339 | WP_181512418.1 | phage head closure protein | - |
| HV325_RS10325 () | 2111682..2112131 | + | 450 | WP_038642098.1 | HK97 gp10 family phage protein | - |
| HV325_RS10330 () | 2112128..2112475 | + | 348 | WP_065944737.1 | DUF3168 domain-containing protein | - |
| HV325_RS10335 () | 2112530..2113000 | + | 471 | WP_136397990.1 | phage tail protein | - |
| HV325_RS10340 () | 2113056..2113457 | + | 402 | WP_136397991.1 | phage tail assembly chaperone | - |
| HV325_RS10345 () | 2113481..2113744 | + | 264 | WP_136397992.1 | DUF4035 domain-containing protein | - |
| HV325_RS10350 () | 2113779..2117066 | + | 3288 | WP_181512419.1 | phage tail tape measure protein | - |
| HV325_RS10355 () | 2117069..2117407 | + | 339 | WP_181512420.1 | phage tail protein | - |
| HV325_RS10360 () | 2117404..2118162 | + | 759 | WP_181512421.1 | phage minor tail protein L | - |
| HV325_RS10365 () | 2118164..2118874 | + | 711 | WP_181512422.1 | C40 family peptidase | - |
| HV325_RS10370 () | 2118908..2119255 | + | 348 | WP_129464582.1 | hypothetical protein | - |
| HV325_RS10375 () | 2119262..2119597 | + | 336 | WP_032622494.1 | hypothetical protein | - |
| HV325_RS10380 () | 2119653..2120252 | + | 600 | WP_071701023.1 | tail assembly protein | - |
| HV325_RS10385 () | 2120290..2120607 | + | 318 | WP_181512423.1 | hypothetical protein | - |
| HV325_RS10390 () | 2120576..2120836 | - | 261 | WP_008323354.1 | hypothetical protein | - |
| HV325_RS10395 () | 2121003..2124218 | + | 3216 | Protein_2033 | host specificity protein J | - |
| HV325_RS10400 () | 2124741..2125238 | + | 498 | WP_052941158.1 | hypothetical protein | - |
| HV325_RS10405 () | 2125645..2126871 | + | 1227 | WP_181512424.1 | tail fiber domain-containing protein | - |
| HV325_RS10415 () | 2127109..2127351 | - | 243 | WP_115258000.1 | DinI family protein | - |
| HV325_RS10420 () | 2127427..2127669 | + | 243 | WP_115258001.1 | DNA polymerase V | - |
| HV325_RS10425 () | 2127672..2128061 | + | 390 | WP_086539175.1 | DNA polymerase V | - |
| HV325_RS10430 () | 2128656..2129222 | - | 567 | WP_003841685.1 | hydrolase | - |
| HV325_RS10435 () | 2129636..2131408 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| HV325_RS10440 () | 2131410..2131853 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| HV325_RS10445 () | 2131882..2132625 | + | 744 | WP_003034865.1 | transcriptional regulatory protein YebC | VF |
| HV325_RS10450 () | 2132660..2133181 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HV325_RS10455 () | 2133262..2133873 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| HV325_RS10460 () | 2133882..2134892 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HV325_RS10465 () | 2134971..2135756 | - | 786 | WP_003034874.1 | hypothetical protein | VF |
| HV325_RS10470 () | 2135753..2136508 | - | 756 | WP_003034877.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HV325_RS10475 () | 2136587..2137531 | + | 945 | WP_049016091.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV325_RS10480 () | 2137547..2138866 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| HV325_RS10485 () | 2138986..2139957 | + | 972 | WP_003844150.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HV325_RS10490 () | 2140001..2141443 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| HV325_RS10495 () | 2141562..2142431 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| HV325_RS10500 () | 2142799..2144274 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| HV325_RS10505 () | 2144508..2146319 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| HV325_RS10510 () | 2146354..2146995 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV325_RS10515 () | 2147063..2148241 | - | 1179 | WP_049016038.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV325_RS10520 () | 2148373..2148663 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV325_RS10525 () | 2148785..2149138 | + | 354 | WP_003034909.1 | protein YebF | - |
| HV325_RS10530 () | 2149233..2149892 | + | 660 | WP_049016040.1 | tellurite resistance TerB family protein | - |
| HV325_RS10535 () | 2149979..2152033 | + | 2055 | WP_049016042.1 | oligopeptidase B | - |
| HV325_RS10540 () | 2152024..2152686 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| HV325_RS10545 () | 2152710..2153366 | - | 657 | WP_046671220.1 | carbon-nitrogen hydrolase family protein | - |
| HV325_RS10550 () | 2153473..2153703 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV325_RS10555 () | 2153847..2154221 | + | 375 | WP_044711069.1 | CopC domain-containing protein YobA | - |
| HV325_RS10560 () | 2154225..2155097 | + | 873 | WP_032935389.1 | copper homeostasis membrane protein CopD | - |
| HV325_RS10565 () | 2155118..2155456 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 2155577..2155718 | - | 142 | - | - | Antitoxin Detail |
| - () | 2155612..2155715 | + | 104 | - | - | Toxin Detail |
| HV325_RS10570 () | 2155848..2156927 | - | 1080 | WP_049016043.1 | hypothetical protein ; Integrase | Integrase |
| HV325_RS10575 () | 2156905..2157165 | - | 261 | WP_049016044.1 | hypothetical protein | - |
| HV325_RS10580 () | 2157452..2159299 | - | 1848 | WP_049016093.1 | hypothetical protein | - |
| HV325_RS10585 () | 2159633..2159818 | - | 186 | WP_049016045.1 | hypothetical protein | - |
| HV325_RS10590 () | 2159811..2160005 | - | 195 | WP_049025790.1 | hypothetical protein | - |
| HV325_RS10595 () | 2160373..2160636 | + | 264 | WP_071891820.1 | hypothetical protein | - |
| HV325_RS10600 () | 2160881..2161288 | - | 408 | WP_047502014.1 | ISNCY family transposase ISH7A | Transposase |
| HV325_RS10605 () | 2161371..2161610 | + | 240 | WP_049016047.1 | transcriptional regulator | - |
| HV325_RS10610 () | 2161610..2162086 | + | 477 | WP_049016048.1 | hypothetical protein | - |
| HV325_RS10615 () | 2162099..2162341 | + | 243 | WP_049016049.1 | DUF4222 domain-containing protein | - |
| HV325_RS10620 () | 2162338..2163432 | + | 1095 | WP_053087078.1 | hypothetical protein | - |
| HV325_RS10625 () | 2163416..2163871 | + | 456 | WP_080971892.1 | replication protein | - |
| HV325_RS10630 () | 2163885..2164547 | + | 663 | WP_049016051.1 | DUF1627 domain-containing protein | - |
| HV325_RS10635 () | 2164544..2164753 | + | 210 | WP_049016052.1 | hypothetical protein | - |
| HV325_RS10640 () | 2164765..2165097 | + | 333 | WP_152686929.1 | hypothetical protein | - |
| HV325_RS10645 () | 2165897..2166094 | + | 198 | WP_049016056.1 | hypothetical protein | - |
| HV325_RS10650 () | 2166274..2166648 | + | 375 | WP_016150400.1 | hypothetical protein | - |
| HV325_RS10655 () | 2166990..2168228 | + | 1239 | WP_003030308.1 | IS110 family transposase ISCps4 | Transposase |
| HV325_RS10660 () | 2168410..2168901 | - | 492 | WP_049016059.1 | GNAT family N-acetyltransferase | - |
| HV325_RS10665 () | 2169038..2170009 | + | 972 | WP_065230385.1 | LysR family transcriptional regulator | - |
| HV325_RS10670 () | 2170449..2170685 | + | 237 | WP_049016061.1 | DinI-like family protein | - |
| HV325_RS10675 () | 2170807..2170989 | + | 183 | WP_049016062.1 | hypothetical protein | - |
| HV325_RS10680 () | 2171135..2171443 | + | 309 | WP_049016063.1 | DUF968 domain-containing protein | - |
| HV325_RS10685 () | 2171436..2171795 | + | 360 | WP_049016064.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV325_RS10690 () | 2171792..2172391 | + | 600 | WP_049016065.1 | hypothetical protein | - |
| HV325_RS10695 () | 2172734..2172946 | - | 213 | WP_016150437.1 | KTSC domain-containing protein | - |
| HV325_RS10700 () | 2173651..2173839 | + | 189 | WP_110248574.1 | hypothetical protein | - |
| HV325_RS10705 () | 2174272..2174550 | + | 279 | WP_003826170.1 | holin | - |
| HV325_RS10710 () | 2174522..2175067 | + | 546 | WP_049016066.1 | lysozyme | - |
| HV325_RS10715 () | 2175067..2175519 | + | 453 | WP_049016068.1 | lysis protein | - |
| HV325_RS10720 () | 2175558..2175968 | - | 411 | WP_143358120.1 | hypothetical protein | - |
| HV325_RS10725 () | 2176290..2176517 | + | 228 | WP_049016102.1 | hypothetical protein | - |
| HV325_RS10730 () | 2176629..2176847 | + | 219 | WP_049016069.1 | hypothetical protein | - |
| HV325_RS10735 () | 2177149..2177637 | + | 489 | WP_049016103.1 | DUF1441 family protein | - |
| HV325_RS10740 () | 2177637..2179739 | + | 2103 | WP_049016070.1 | phage terminase large subunit family protein | - |
| HV325_RS10745 () | 2179736..2179951 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| HV325_RS10750 () | 2179948..2181456 | + | 1509 | WP_049016071.1 | phage portal protein | - |
| HV325_RS10755 () | 2181383..2183425 | + | 2043 | WP_181512425.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HV325_RS10760 () | 2183517..2183843 | + | 327 | WP_049016105.1 | DUF2190 family protein | - |
| HV325_RS10765 () | 2183836..2184111 | + | 276 | WP_049016073.1 | ATP-binding protein | - |
| HV325_RS10770 () | 2184124..2184678 | + | 555 | WP_044712015.1 | phage tail protein | - |
| HV325_RS10775 () | 2184675..2185073 | + | 399 | WP_008784478.1 | tail protein | - |
| HV325_RS10780 () | 2185081..2185818 | + | 738 | WP_049016074.1 | phage tail protein | - |
| HV325_RS10785 () | 2185855..2186262 | + | 408 | WP_049016076.1 | phage minor tail protein G | - |
| HV325_RS10790 () | 2186271..2186591 | + | 321 | WP_071524448.1 | phage tail assembly protein T | - |
| HV325_RS10795 () | 2186569..2189085 | + | 2517 | WP_049016078.1 | phage tail tape measure protein | - |
| HV325_RS10800 () | 2189089..2189436 | + | 348 | WP_032938657.1 | phage tail protein | - |
| HV325_RS10805 () | 2189433..2190188 | + | 756 | WP_049016081.1 | phage minor tail protein L | - |
| HV325_RS10810 () | 2190190..2190900 | + | 711 | WP_049016082.1 | C40 family peptidase | - |
| HV325_RS10815 () | 2190930..2191271 | + | 342 | WP_075204975.1 | hypothetical protein | - |
| HV325_RS10820 () | 2191315..2191920 | + | 606 | WP_049016085.1 | tail assembly protein | - |
| HV325_RS10825 () | 2191974..2195159 | + | 3186 | WP_049016087.1 | host specificity protein J | - |
| HV325_RS10830 () | 2195159..2195473 | + | 315 | WP_044712038.1 | hypothetical protein | - |
| HV325_RS10835 () | 2195474..2196148 | + | 675 | WP_049016089.1 | hypothetical protein | - |
| HV325_RS10840 () | 2196257..2196493 | + | 237 | WP_075204974.1 | cor protein | - |
| HV325_RS10845 () | 2196556..2197782 | + | 1227 | WP_080971893.1 | tail fiber domain-containing protein | - |
| HV325_RS10855 () | 2198065..2199120 | - | 1056 | WP_181512426.1 | acyltransferase | - |
| HV325_RS10860 () | 2199306..2199392 | - | 87 | Protein_2124 | DinI-like family protein | - |
| HV325_RS10865 () | 2199745..2200386 | + | 642 | WP_048217477.1 | protein-serine/threonine phosphatase | - |
| HV325_RS10870 () | 2200387..2200578 | - | 192 | WP_003034941.1 | YebW family protein | - |
| HV325_RS10875 () | 2200681..2200917 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV325_RS10880 () | 2201018..2202439 | - | 1422 | WP_075204992.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV325_RS10885 () | 2202519..2205152 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| HV325_RS10890 () | 2205121..2206404 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| HV325_RS10895 () | 2206533..2207030 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| HV325_RS10900 () | 2207127..2207813 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| HV325_RS10905 () | 2207833..2209881 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| HV325_RS10910 () | 2210074..2210955 | + | 882 | WP_003034964.1 | protease HtpX | - |
| HV325_RS10915 () | 2211002..2212375 | - | 1374 | WP_049014631.1 | MFS transporter | - |
| HV325_RS10920 () | 2212550..2213341 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| HV325_RS10925 () | 2213456..2213695 | - | 240 | WP_003841988.1 | hypothetical protein | - |
| HV325_RS10930 () | 2213839..2214536 | + | 698 | Protein_2138 | IS1 family transposase IS1R | Transposase |
| HV325_RS10935 () | 2214637..2214780 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| HV325_RS10940 () | 2214855..2215139 | + | 285 | WP_003841991.1 | YebO family protein | - |
| HV325_RS10945 () | 2215776..2215919 | + | 144 | WP_003034983.1 | YobF family protein | - |
| HV325_RS10950 () | 2215932..2216141 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV325_RS10955 () | 2216361..2218106 | + | 1746 | WP_003021017.1 | peptidoglycan glycosyltransferase FtsI | - |
| HV325_RS10960 () | 2218170..2218979 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV325_RS10965 () | 2218976..2219542 | - | 567 | WP_049014634.1 | manganese efflux pump MntP | - |
| HV325_RS10970 () | 2219975..2220433 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|