MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82097 bp
Accession: NZ_CP056241 Location: 1..82097 Organism: Citrobacter freundii strain RHBSTW-00935 Replicon: plasmid pRHBSTW-00935_4
Accession: NZ_CP056241 Location: 1..82097 Organism: Citrobacter freundii strain RHBSTW-00935 Replicon: plasmid pRHBSTW-00935_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV330_RS26580 () | 261..1883 | - | 1623 | WP_048233562.1 | ABC transporter substrate-binding protein | - |
| HV330_RS26585 () | 2279..4366 | + | 2088 | WP_032936136.1 | TonB-dependent receptor | - |
| HV330_RS26590 () | 4482..4679 | - | 198 | WP_061549978.1 | hypothetical protein | - |
| HV330_RS26595 () | 4849..6371 | - | 1523 | Protein_4 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| HV330_RS26600 () | 6611..6883 | + | 273 | WP_003030757.1 | hypothetical protein | - |
| HV330_RS26605 () | 7149..7403 | - | 255 | WP_003846687.1 | hypothetical protein | - |
| HV330_RS26610 () | 7414..7908 | - | 495 | WP_016150090.1 | Outer membrane protein X | VF |
| HV330_RS26615 () | 8431..8544 | - | 114 | Protein_8 | isocitrate dehydrogenase | - |
| HV330_RS26620 () | 8788..9213 | - | 426 | WP_103849213.1 | glutaredoxin-dependent arsenate reductase | - |
| HV330_RS26625 () | 9226..10515 | - | 1290 | WP_103849215.1 | arsenic transporter | - |
| HV330_RS26630 () | 10560..10880 | - | 321 | WP_003030762.1 | transcriptional regulator | - |
| HV330_RS26635 () | 10966..11664 | + | 699 | WP_061549503.1 | arsenical resistance protein ArsH | - |
| HV330_RS26640 () | 11741..11973 | - | 233 | Protein_13 | DNA polymerase V | - |
| HV330_RS26645 () | 12052..12294 | + | 243 | WP_003840850.1 | DinI family protein | - |
| HV330_RS26650 () | 12469..12978 | + | 510 | WP_003030767.1 | VTT domain-containing protein | - |
| HV330_RS26655 () | 13114..14364 | - | 1251 | WP_003030769.1 | NADP-dependent isocitrate dehydrogenase | - |
| HV330_RS26660 () | 14567..15184 | + | 618 | WP_003846701.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| HV330_RS26665 () | 15219..16151 | + | 933 | WP_003846703.1 | hypothetical protein | - |
| HV330_RS26670 () | 16161..16622 | + | 462 | WP_003841887.1 | NUDIX hydrolase | - |
| HV330_RS26675 () | 16676..17782 | + | 1107 | WP_003832402.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| HV330_RS26680 () | 17817..18458 | + | 642 | WP_003841885.1 | high frequency lysogenization protein HflD | - |
| HV330_RS26685 () | 18462..19832 | + | 1371 | WP_003846707.1 | adenylosuccinate lyase | - |
| HV330_RS26690 () | 19997..20668 | + | 672 | WP_003030783.1 | Transcriptional regulatory protein PhoP | VF |
| HV330_RS26695 () | 20668..22131 | + | 1464 | WP_016150060.1 | two-component system sensor histidine kinase PhoQ | - |
| HV330_RS26700 () | 22224..23345 | + | 1122 | WP_003030786.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| HV330_RS26705 () | 23448..24674 | - | 1227 | WP_032936142.1 | peptidase T | - |
| HV330_RS26710 () | 24925..26061 | + | 1137 | WP_003030791.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HV330_RS26715 () | 26045..26902 | + | 858 | WP_003030793.1 | spermidine/putrescine ABC transporter permease PotB | - |
| HV330_RS26720 () | 26899..27678 | + | 780 | WP_003030794.1 | spermidine/putrescine ABC transporter permease PotC | - |
| HV330_RS26725 () | 27706..28752 | + | 1047 | WP_103849020.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| HV330_RS26730 () | 28852..29673 | - | 822 | WP_003030799.1 | NAD-dependent protein deacylase | - |
| HV330_RS26735 () | 29689..30600 | - | 912 | WP_003030802.1 | N-acetylglucosamine kinase | - |
| HV330_RS26740 () | 30690..31934 | - | 1245 | WP_103849014.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| HV330_RS26745 () | 31934..32635 | - | 702 | WP_003030805.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HV330_RS26750 () | 32628..33827 | - | 1200 | WP_003030806.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| HV330_RS26755 () | 34089..35153 | + | 1065 | WP_003846719.1 | acyltransferase family protein | - |
| HV330_RS26760 () | 35272..38718 | + | 3447 | WP_181502641.1 | transcription-repair coupling factor | - |
| HV330_RS26765 () | 38868..39833 | + | 966 | WP_048241193.1 | L,D-transpeptidase family protein | - |
| HV330_RS26770 () | 39919..40176 | - | 258 | WP_003030810.1 | DUF1471 domain-containing protein | - |
| HV330_RS26775 () | 40420..41055 | + | 636 | WP_016149993.1 | HTH-type transcriptional repressor ComR | VF |
| HV330_RS26780 () | 41310..43490 | + | 2181 | WP_032936147.1 | Ferric aerobactin receptor | VF |
| HV330_RS26785 () | 43548..44087 | - | 540 | WP_032936150.1 | glycine zipper 2TM domain-containing protein | - |
| HV330_RS26790 () | 44256..45560 | - | 1305 | WP_181502637.1 | NADH-quinone dehydrogenase | - |
| HV330_RS26795 () | 45797..46339 | - | 543 | WP_003030817.1 | alpha/beta hydrolase YcfP | - |
| HV330_RS26800 () | 46361..47386 | - | 1026 | WP_003841848.1 | beta-N-acetylhexosaminidase | - |
| HV330_RS26805 () | 47397..48221 | - | 825 | WP_181502638.1 | thiamine kinase | - |
| HV330_RS26810 () | 48202..48843 | - | 642 | WP_003846732.1 | penicillin-binding protein activator LpoB | - |
| HV330_RS26815 () | 48857..49231 | - | 375 | WP_003030823.1 | YcfL family protein | - |
| HV330_RS26820 () | 49234..49593 | - | 360 | WP_003030826.1 | purine nucleoside phosphoramidase | - |
| HV330_RS26825 () | 49865..50755 | - | 891 | WP_032936156.1 | HTH-type transcriptional regulator CatM | VF |
| HV330_RS26830 () | 50902..51501 | + | 600 | WP_048216605.1 | cysteine hydrolase | - |
| HV330_RS26835 () | 51498..52535 | + | 1038 | WP_003846740.1 | hydrogenase expression/formation protein HypE | - |
| HV330_RS26840 () | 52507..54873 | + | 2367 | WP_181502639.1 | carbamoyltransferase HypF | - |
| HV330_RS26845 () | 54866..55585 | + | 720 | WP_032936159.1 | HAD family phosphatase | - |
| HV330_RS26850 () | 55603..56772 | + | 1170 | WP_032936161.1 | MFS transporter | - |
| HV330_RS26860 () | 57052..58539 | + | 1488 | WP_003846749.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| HV330_RS26870 () | 58855..59805 | - | 951 | WP_003846751.1 | HTH-type transcriptional regulator Cbl | - |
| HV330_RS26875 () | 59907..60824 | - | 918 | WP_003030855.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HV330_RS26885 () | 61299..61631 | - | 333 | WP_003836692.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HV330_RS26890 () | 61632..61889 | - | 258 | WP_003836694.1 | hypothetical protein | Antitoxin Detail |
| HV330_RS26895 () | 62613..63310 | + | 698 | Protein_61 | IS1 family transposase | - |
| HV330_RS26900 () | 63328..67179 | + | 3852 | Protein_62 | hypothetical protein | - |
| HV330_RS26905 () | 67184..69622 | + | 2439 | WP_181502640.1 | hypothetical protein | - |
| HV330_RS26910 () | 69674..70625 | + | 952 | Protein_64 | IS3 family transposase | - |
| HV330_RS26915 () | 70837..71907 | + | 1071 | WP_001180631.1 | IS110 family transposase ISLxx2 | Transposase |
| HV330_RS26920 () | 71915..72130 | + | 216 | Protein_66 | IS3 family transposase ISLad1 | Transposase |
| HV330_RS26925 () | 72137..73036 | + | 900 | Protein_67 | sensor domain-containing diguanylate cyclase | - |
| HV330_RS26930 () | 73084..73182 | + | 99 | WP_032941789.1 | YoaK family small membrane protein | - |
| HV330_RS26935 () | 73207..73260 | + | 54 | WP_181502642.1 | hypothetical protein | - |
| HV330_RS26940 () | 73310..73558 | - | 249 | WP_003030729.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| HV330_RS26945 () | 73918..76065 | + | 2148 | WP_103849177.1 | formate dehydrogenase subunit alpha | - |
| HV330_RS26950 () | 76118..76762 | - | 645 | WP_003840864.1 | hypothetical protein | - |
| HV330_RS26955 () | 76979..77161 | - | 183 | WP_003840863.1 | DUF1869 domain-containing protein | - |
| HV330_RS26960 () | 77165..77527 | - | 363 | WP_003030735.1 | DUF1971 domain-containing protein YeaR | - |
| HV330_RS26965 () | 77702..78340 | - | 639 | WP_003840862.1 | leucine efflux protein LeuE | - |
| HV330_RS26970 () | 78480..79130 | - | 651 | WP_048219059.1 | metal-binding protein ZinT | - |
| HV330_RS26975 () | 79220..79810 | - | 591 | WP_003030739.1 | ATP-binding cassette domain-containing protein | - |
| HV330_RS26980 () | 79794..80588 | - | 795 | WP_103849242.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| HV330_RS26985 () | 80582..81394 | - | 813 | WP_103849243.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|